RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 PFKFB3Q16875 520 aaPredicted RBP4.41□□□□□ -1.7
RTN4-209ENST00000405240 ERFEQ4G0M1 354 aa4.41□□□□□ -1.7
RTN4-209ENST00000405240 ZNF662Q6ZS27 426 aa4.41□□□□□ -1.7
RTN4-209ENST00000405240 RASGRP2Q7LDG7 609 aa4.41□□□□□ -1.7
RTN4-209ENST00000405240 BAG1Q99933 345 aaPredicted RBP4.41□□□□□ -1.7
RTN4-209ENST00000405240 ZKSCAN3Q9BRR0 538 aa4.41□□□□□ -1.7
RTN4-209ENST00000405240 CABP5Q9NP86 173 aa4.41□□□□□ -1.7
RTN4-209ENST00000405240 SAMSN1Q9NSI8 373 aaKnown RBP4.41□□□□□ -1.7
RTN4-209ENST00000405240 NFE2L3Q9Y4A8 694 aa4.41□□□□□ -1.7
RTN4-209ENST00000405240 ERICH2A1L162 156 aa4.4□□□□□ -1.7
RTN4-209ENST00000405240 WTIPA6NIX2 430 aaPredicted RBP4.4□□□□□ -1.7
RTN4-209ENST00000405240 TRIM75PA6NK02 468 aa4.4□□□□□ -1.7
RTN4-209ENST00000405240 ADAMTS3O15072 1205 aa4.4□□□□□ -1.7
RTN4-209ENST00000405240 PLEKHA8P1O95397 391 aa4.4□□□□□ -1.7
RTN4-209ENST00000405240 SERPINC1P01008 464 aa4.4□□□□□ -1.7
RTN4-209ENST00000405240 TPM1P09493 284 aa4.4□□□□□ -1.7
RTN4-209ENST00000405240 CLCN6P51797 869 aa4.4□□□□□ -1.7
RTN4-209ENST00000405240 ZRSR1Q15695 479 aaKnown RBP4.4□□□□□ -1.7
RTN4-209ENST00000405240 COBLL1Q53SF7 1204 aa4.4□□□□□ -1.7
RTN4-209ENST00000405240 ISM2Q6H9L7 571 aa4.4□□□□□ -1.7
RTN4-209ENST00000405240 TOGARAM2Q6ZUX3 1019 aa4.4□□□□□ -1.7
RTN4-209ENST00000405240 LINC00116Q8NCU8 138 aa4.4□□□□□ -1.7
RTN4-209ENST00000405240 SDR42E1Q8WUS8 393 aa4.4□□□□□ -1.7
RTN4-209ENST00000405240 SYMPKQ92797 1274 aaKnown RBP4.4□□□□□ -1.7
RTN4-209ENST00000405240 SMARCC1Q92922 1105 aaPredicted RBP4.4□□□□□ -1.7
RTN4-209ENST00000405240 CCDC51Q96ER9 411 aa4.4□□□□□ -1.7
RTN4-209ENST00000405240 PYM1Q9BRP8 204 aaKnown RBP4.4□□□□□ -1.7
RTN4-209ENST00000405240 ATP8A2Q9NTI2 1148 aa4.4□□□□□ -1.7
RTN4-209ENST00000405240 RWDD2AQ9UIY3 292 aa4.4□□□□□ -1.7
RTN4-209ENST00000405240 SIPA1L1O43166 1804 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 SPDYE4A6NLX3 237 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 ADAMTS2O95450 1211 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 DYNLL1P63167 89 aaKnown RBP4.4□□□□□ -1.71
RTN4-209ENST00000405240 TERF2Q15554 542 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 CFAP100Q494V2 611 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 NOM1Q5C9Z4 860 aaKnown RBP4.4□□□□□ -1.71
RTN4-209ENST00000405240 SPECC1Q5M775 1068 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 GRAMD1CQ8IYS0 662 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 KRT222Q8N1A0 295 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 MIGA1Q8NAN2 632 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 FBXW7Q969H0 707 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 EPSTI1Q96J88 318 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 DCP1AQ9NPI6 582 aaPredicted RBP4.4□□□□□ -1.71
RTN4-209ENST00000405240 GNL3LQ9NVN8 582 aaKnown RBP4.4□□□□□ -1.71
RTN4-209ENST00000405240 NIP7Q9Y221 180 aaKnown RBP eCLIP4.4□□□□□ -1.71
RTN4-209ENST00000405240 ZNF330Q9Y3S2 320 aaPredicted RBP4.4□□□□□ -1.71
RTN4-209ENST00000405240 GYG1P46976 350 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 PLA2G4AP47712 749 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 TUBB2AQ13885 445 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 SLC35G1Q2M3R5 365 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 ERCC6LQ2NKX8 1250 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 CATIPQ7Z7H3 387 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 ANKRD18AQ8IVF6 992 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 CMTR1Q8N1G2 835 aaKnown RBP4.4□□□□□ -1.71
RTN4-209ENST00000405240 CTAGE1Q96RT6 745 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 WDR24Q96S15 920 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 UBAC1Q9BSL1 405 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 TUBB2BQ9BVA1 445 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 LRP2BPQ9P2M1 347 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 ZNF652Q9Y2D9 606 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 ADGRG1Q9Y653 693 aa4.4□□□□□ -1.71
RTN4-209ENST00000405240 ANKRD31Q8N7Z5 1873 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.39□□□□□ -1.71
RTN4-209ENST00000405240 TEX33O43247 280 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 GTPBP6O43824 516 aaPredicted RBP4.39□□□□□ -1.71
RTN4-209ENST00000405240 NRDCO43847 1150 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 MYL1P05976 194 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 LONP1P36776 959 aaKnown RBP4.39□□□□□ -1.71
RTN4-209ENST00000405240 USP5P45974 858 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 PPP4CP60510 307 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 MECOMQ03112 1051 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 GOLGA8FQ08AF8 430 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 GOLGA8DPQ0D2H9 430 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 GNL2Q13823 731 aaKnown RBP4.39□□□□□ -1.71
RTN4-209ENST00000405240 RAD9BQ6WBX8 426 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 DGKHQ86XP1 1220 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 ZNF507Q8TCN5 953 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 ZNF592Q92610 1267 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 MRPL44Q9H9J2 332 aaKnown RBP4.39□□□□□ -1.71
RTN4-209ENST00000405240 IL17RBQ9NRM6 502 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 VPS54Q9P1Q0 977 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 ARPP21Q9UBL0 812 aaPredicted RBP4.39□□□□□ -1.71
RTN4-209ENST00000405240 SNED1Q8TER0 1413 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 AKR1B15C9JRZ8 316 aaPredicted RBP4.39□□□□□ -1.71
RTN4-209ENST00000405240 KLRC4O43908 158 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 MFAP3LO75121 409 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 GYPCP04921 128 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 SCG2P13521 617 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 XBP1P17861 261 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 EVX2Q03828 476 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 RBL2Q08999 1139 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 BMS1Q14692 1282 aaKnown RBP4.39□□□□□ -1.71
RTN4-209ENST00000405240 KCNB1Q14721 858 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 GRM4Q14833 912 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 DDB1Q16531 1140 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 TTC38Q5R3I4 469 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 IFIT1BQ5T764 474 aaKnown RBP4.39□□□□□ -1.71
RTN4-209ENST00000405240 ZNF658Q5TYW1 1059 aaPredicted RBP4.39□□□□□ -1.71
RTN4-209ENST00000405240 IRF2BP1Q8IU81 584 aa4.39□□□□□ -1.71
RTN4-209ENST00000405240 GPR161Q8N6U8 529 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms