RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 PLEKHA8P1O95397 391 aa10.79□□□□□ -0.68
SMC1B-202ENST00000404354 ATP1A2P50993 1020 aa10.79□□□□□ -0.68
SMC1B-202ENST00000404354 COPB1P53618 953 aaKnown RBP10.79□□□□□ -0.68
SMC1B-202ENST00000404354 RNASE9P60153 205 aaKnown RBP10.79□□□□□ -0.68
SMC1B-202ENST00000404354 PTGDRQ13258 359 aa10.79□□□□□ -0.68
SMC1B-202ENST00000404354 HLFQ16534 295 aa10.79□□□□□ -0.68
SMC1B-202ENST00000404354 KRT26Q7Z3Y9 468 aa10.79□□□□□ -0.68
SMC1B-202ENST00000404354 LCORLQ8N3X6 602 aa10.79□□□□□ -0.68
SMC1B-202ENST00000404354 CRACR2BQ8N4Y2 399 aaPredicted RBP10.79□□□□□ -0.68
SMC1B-202ENST00000404354 HNRNPLLQ8WVV9 542 aaKnown RBP10.79□□□□□ -0.68
SMC1B-202ENST00000404354 NELFBQ8WX92 580 aa10.79□□□□□ -0.68
SMC1B-202ENST00000404354 TMEM87BQ96K49 555 aa10.79□□□□□ -0.68
SMC1B-202ENST00000404354 UBAC1Q9BSL1 405 aa10.79□□□□□ -0.68
SMC1B-202ENST00000404354 FAM107BQ9H098 131 aa10.79□□□□□ -0.68
SMC1B-202ENST00000404354 KAT14Q9H8E8 782 aa10.79□□□□□ -0.68
SMC1B-202ENST00000404354 TTF2Q9UNY4 1162 aaKnown RBP10.79□□□□□ -0.68
SMC1B-202ENST00000404354 KCNJ18B7U540 433 aa10.78□□□□□ -0.68
SMC1B-202ENST00000404354 PDE2AO00408 941 aaPredicted RBP10.78□□□□□ -0.68
SMC1B-202ENST00000404354 NDUFA10O95299 355 aa10.78□□□□□ -0.68
SMC1B-202ENST00000404354 IFNAR1P17181 557 aa10.78□□□□□ -0.68
SMC1B-202ENST00000404354 EVX2Q03828 476 aa10.78□□□□□ -0.68
SMC1B-202ENST00000404354 KCNJ12Q14500 433 aa10.78□□□□□ -0.68
SMC1B-202ENST00000404354 SND1Q7KZF4 910 aaKnown RBP eCLIP10.78□□□□□ -0.68
SMC1B-202ENST00000404354 FBXL16Q8N461 479 aa10.78□□□□□ -0.68
SMC1B-202ENST00000404354 FANCBQ8NB91 859 aa10.78□□□□□ -0.68
SMC1B-202ENST00000404354 AGPAT5Q9NUQ2 364 aa10.78□□□□□ -0.68
SMC1B-202ENST00000404354 FAM237AA0A1B0GTK4 181 aa10.78□□□□□ -0.68
SMC1B-202ENST00000404354 RCCD1A6NED2 376 aa10.78□□□□□ -0.68
SMC1B-202ENST00000404354 PP2D1A8MPX8 630 aa10.78□□□□□ -0.68
SMC1B-202ENST00000404354 ZEB2O60315 1214 aa10.78□□□□□ -0.68
SMC1B-202ENST00000404354 ERCC5P28715 1186 aaPredicted RBP10.78□□□□□ -0.68
SMC1B-202ENST00000404354 USP5P45974 858 aa10.78□□□□□ -0.68
SMC1B-202ENST00000404354 AKNAD1Q5T1N1 836 aa10.78□□□□□ -0.68
SMC1B-202ENST00000404354 CYP26C1Q6V0L0 522 aa10.78□□□□□ -0.68
SMC1B-202ENST00000404354 PIK3AP1Q6ZUJ8 805 aa10.78□□□□□ -0.68
SMC1B-202ENST00000404354 TMTC1Q8IUR5 882 aa10.78□□□□□ -0.68
SMC1B-202ENST00000404354 ZNF654Q8IZM8 581 aa10.78□□□□□ -0.68
SMC1B-202ENST00000404354 TTLL11Q8NHH1 800 aa10.78□□□□□ -0.68
SMC1B-202ENST00000404354 SAR1BQ9Y6B6 198 aa10.78□□□□□ -0.68
SMC1B-202ENST00000404354 MYH8P13535 1937 aa10.78□□□□□ -0.68
SMC1B-202ENST00000404354 POTEB2H3BUK9 544 aa10.78□□□□□ -0.68
SMC1B-202ENST00000404354 EIF5P55010 431 aaKnown RBP10.78□□□□□ -0.68
SMC1B-202ENST00000404354 SF3A3Q12874 501 aaKnown RBP eCLIP10.78□□□□□ -0.68
SMC1B-202ENST00000404354 RASGRP4Q8TDF6 673 aa10.78□□□□□ -0.68
SMC1B-202ENST00000404354 JAKMIP2Q96AA8 810 aa10.78□□□□□ -0.68
SMC1B-202ENST00000404354 PMS1P54277 932 aaKnown RBP10.77□□□□□ -0.68
SMC1B-202ENST00000404354 WHAMMP3Q1A5X7 153 aa10.77□□□□□ -0.68
SMC1B-202ENST00000404354 TSR1Q2NL82 804 aaKnown RBP10.77□□□□□ -0.68
SMC1B-202ENST00000404354 GBP3Q9H0R5 595 aa10.77□□□□□ -0.68
SMC1B-202ENST00000404354 ACBD3Q9H3P7 528 aa10.77□□□□□ -0.68
SMC1B-202ENST00000404354 HPCAL4Q9UM19 191 aa10.77□□□□□ -0.68
SMC1B-202ENST00000404354 MRC1P22897 1456 aa10.77□□□□□ -0.69
SMC1B-202ENST00000404354 MEGF6O75095 1541 aa10.77□□□□□ -0.69
SMC1B-202ENST00000404354 WTIPA6NIX2 430 aaPredicted RBP10.77□□□□□ -0.69
SMC1B-202ENST00000404354 NKRFO15226 690 aaKnown RBP eCLIP10.77□□□□□ -0.69
SMC1B-202ENST00000404354 IDEP14735 1019 aa10.77□□□□□ -0.69
SMC1B-202ENST00000404354 TTF1Q15361 905 aaPredicted RBP10.77□□□□□ -0.69
SMC1B-202ENST00000404354 SH2D3CQ8N5H7 860 aa10.77□□□□□ -0.69
SMC1B-202ENST00000404354 BCAS4Q8TDM0 211 aa10.77□□□□□ -0.69
SMC1B-202ENST00000404354 EFCC1Q9HA90 598 aa10.77□□□□□ -0.69
SMC1B-202ENST00000404354 GOLGA6CA6NDK9 693 aa10.77□□□□□ -0.69
SMC1B-202ENST00000404354 CIAO1O76071 339 aa10.77□□□□□ -0.69
SMC1B-202ENST00000404354 DEXIO95424 95 aa10.77□□□□□ -0.69
SMC1B-202ENST00000404354 GOLGA6DP0CG33 693 aa10.77□□□□□ -0.69
SMC1B-202ENST00000404354 PRCPP42785 496 aa10.77□□□□□ -0.69
SMC1B-202ENST00000404354 MNAT1P51948 309 aa10.77□□□□□ -0.69
SMC1B-202ENST00000404354 NT5DC1Q5TFE4 455 aa10.77□□□□□ -0.69
SMC1B-202ENST00000404354 CDKAL1Q5VV42 579 aa10.77□□□□□ -0.69
SMC1B-202ENST00000404354 KANK3Q6NY19 840 aa10.77□□□□□ -0.69
SMC1B-202ENST00000404354 DNAJC10Q8IXB1 793 aa10.77□□□□□ -0.69
SMC1B-202ENST00000404354 WASF1Q92558 559 aa10.77□□□□□ -0.69
SMC1B-202ENST00000404354 MTRQ99707 1265 aa10.77□□□□□ -0.69
SMC1B-202ENST00000404354 SELENOOQ9BVL4 669 aa10.77□□□□□ -0.69
SMC1B-202ENST00000404354 GOLGA6AQ9NYA3 693 aa10.77□□□□□ -0.69
SMC1B-202ENST00000404354 LRP2BPQ9P2M1 347 aa10.77□□□□□ -0.69
SMC1B-202ENST00000404354 TRMT112Q9UI30 125 aaKnown RBP10.77□□□□□ -0.69
SMC1B-202ENST00000404354 LUC7L2Q9Y383 392 aaKnown RBP10.77□□□□□ -0.69
SMC1B-202ENST00000404354 XDHP47989 1333 aa10.77□□□□□ -0.69
SMC1B-202ENST00000404354 NFAT5O94916 1531 aa10.77□□□□□ -0.69
SMC1B-202ENST00000404354 B4DLN1 442 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 NMT2O60551 498 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 PLEKP08567 350 aaPredicted RBP10.76□□□□□ -0.69
SMC1B-202ENST00000404354 PBX1P40424 430 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 BCAMP50895 628 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 USP14P54578 494 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 CORO7P57737 925 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 ATP2B2Q01814 1243 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 ENOX2Q16206 610 aaKnown RBP10.76□□□□□ -0.69
SMC1B-202ENST00000404354 CTAGE1Q96RT6 745 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 DEF6Q9H4E7 631 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 GSG1L2A8MUP6 293 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 EXOC5O00471 708 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 TRIM21P19474 475 aaKnown RBP10.76□□□□□ -0.69
SMC1B-202ENST00000404354 PAK1Q13153 545 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 PTPROQ16827 1216 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 ANKLE2Q86XL3 938 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 ANKRD20A12PQ8NF67 263 aa10.76□□□□□ -0.69
SMC1B-202ENST00000404354 NAA15Q9BXJ9 866 aaKnown RBP10.76□□□□□ -0.69
SMC1B-202ENST00000404354 FOXP1Q9H334 677 aaPredicted RBP10.76□□□□□ -0.69
SMC1B-202ENST00000404354 DMGDHQ9UI17 866 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms