RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 NFXL1Q6ZNB6 911 aa39.03■■■■□ 3.84
CSNK1E-204ENST00000403904 PAXIP1Q6ZW49 1069 aaPredicted RBP39.03■■■■□ 3.84
CSNK1E-204ENST00000403904 TMTC2Q8N394 836 aa39.03■■■■□ 3.84
CSNK1E-204ENST00000403904 FBXL16Q8N461 479 aa39.03■■■■□ 3.84
CSNK1E-204ENST00000403904 KIAA1683Q9H0B3 1180 aa39.03■■■■□ 3.84
CSNK1E-204ENST00000403904 DGKZQ13574 1117 aa39.02■■■■□ 3.84
CSNK1E-204ENST00000403904 PNMA1Q8ND90 353 aa39.02■■■■□ 3.84
CSNK1E-204ENST00000403904 KCNH4Q9UQ05 1017 aa39.02■■■■□ 3.84
CSNK1E-204ENST00000403904 MTMR7Q9Y216 660 aa39.02■■■■□ 3.84
CSNK1E-204ENST00000403904 RAD21O60216 631 aa39.01■■■■□ 3.84
CSNK1E-204ENST00000403904 CHMP4CQ96CF2 233 aa39.01■■■■□ 3.84
CSNK1E-204ENST00000403904 LARP6Q9BRS8 491 aaKnown RBP39.01■■■■□ 3.84
CSNK1E-204ENST00000403904 CCDC69A6NI79 296 aa39■■■■□ 3.83
CSNK1E-204ENST00000403904 CXCL11O14625 94 aa39■■■■□ 3.83
CSNK1E-204ENST00000403904 SLC10A3P09131 477 aa39■■■■□ 3.83
CSNK1E-204ENST00000403904 ZBTB48P10074 688 aaPredicted RBP39■■■■□ 3.83
CSNK1E-204ENST00000403904 AK2P54819 239 aa39■■■■□ 3.83
CSNK1E-204ENST00000403904 DEFB115Q30KQ5 88 aa39■■■■□ 3.83
CSNK1E-204ENST00000403904 SGMS1Q86VZ5 419 aa39■■■■□ 3.83
CSNK1E-204ENST00000403904 ALDH8A1Q9H2A2 487 aaPredicted RBP39■■■■□ 3.83
CSNK1E-204ENST00000403904 RASSF10A6NK89 507 aa38.99■■■■□ 3.83
CSNK1E-204ENST00000403904 HMGCS2P54868 508 aa38.99■■■■□ 3.83
CSNK1E-204ENST00000403904 APOBRQ0VD83 1088 aa38.99■■■■□ 3.83
CSNK1E-204ENST00000403904 F5H6K3 240 aa38.99■■■■□ 3.83
CSNK1E-204ENST00000403904 KLRC3Q07444 240 aa38.99■■■■□ 3.83
CSNK1E-204ENST00000403904 GRM1Q13255 1194 aa38.99■■■■□ 3.83
CSNK1E-204ENST00000403904 KIAA1755Q5JYT7 1200 aa38.99■■■■□ 3.83
CSNK1E-204ENST00000403904 CYP4F22Q6NT55 531 aa38.99■■■■□ 3.83
CSNK1E-204ENST00000403904 CCDC102AQ96A19 550 aa38.99■■■■□ 3.83
CSNK1E-204ENST00000403904 VCPKMTQ9H867 229 aa38.99■■■■□ 3.83
CSNK1E-204ENST00000403904 EMILIN3Q9NT22 766 aa38.99■■■■□ 3.83
CSNK1E-204ENST00000403904 BRPF3Q9ULD4 1205 aa38.99■■■■□ 3.83
CSNK1E-204ENST00000403904 SYNPO2Q9UMS6 1093 aa38.99■■■■□ 3.83
CSNK1E-204ENST00000403904 FAM155AB1AL88 458 aaPredicted RBP38.98■■■■□ 3.83
CSNK1E-204ENST00000403904 C19orf81C9J6K1 198 aa38.98■■■■□ 3.83
CSNK1E-204ENST00000403904 SPICE1Q8N0Z3 855 aa38.98■■■■□ 3.83
CSNK1E-204ENST00000403904 GOPCQ9HD26 462 aa38.98■■■■□ 3.83
CSNK1E-204ENST00000403904 USP14P54578 494 aa38.97■■■■□ 3.83
CSNK1E-204ENST00000403904 A0A0G2JLL6 359 aaPredicted RBP38.96■■■■□ 3.83
CSNK1E-204ENST00000403904 SNAPC2Q13487 334 aa38.96■■■■□ 3.83
CSNK1E-204ENST00000403904 USP17L2Q6R6M4 530 aa38.96■■■■□ 3.83
CSNK1E-204ENST00000403904 NOL8Q76FK4 1167 aaKnown RBP38.96■■■■□ 3.83
CSNK1E-204ENST00000403904 RASGRP2Q7LDG7 609 aa38.96■■■■□ 3.83
CSNK1E-204ENST00000403904 PRRT2Q7Z6L0 340 aaPredicted RBP38.96■■■■□ 3.83
CSNK1E-204ENST00000403904 ZNF654Q8IZM8 581 aa38.96■■■■□ 3.83
CSNK1E-204ENST00000403904 GMCL1P1Q8NEA9 526 aa38.96■■■■□ 3.83
CSNK1E-204ENST00000403904 MYL10Q9BUA6 226 aa38.96■■■■□ 3.83
CSNK1E-204ENST00000403904 SLC12A7Q9Y666 1083 aa38.96■■■■□ 3.83
CSNK1E-204ENST00000403904 KLF18A0A0U1RQI7 1052 aa38.95■■■■□ 3.83
CSNK1E-204ENST00000403904 NDUFB10O96000 172 aa38.95■■■■□ 3.83
CSNK1E-204ENST00000403904 SH3D19Q5HYK7 790 aa38.95■■■■□ 3.83
CSNK1E-204ENST00000403904 CATIPQ7Z7H3 387 aa38.95■■■■□ 3.83
CSNK1E-204ENST00000403904 ST18O60284 1047 aa38.95■■■■□ 3.83
CSNK1E-204ENST00000403904 ANKRD1Q15327 319 aa38.95■■■■□ 3.83
CSNK1E-204ENST00000403904 SLFN13Q68D06 897 aa38.95■■■■□ 3.83
CSNK1E-204ENST00000403904 RAB11FIP4Q86YS3 637 aa38.95■■■■□ 3.83
CSNK1E-204ENST00000403904 MS4A4AQ96JQ5 239 aa38.95■■■■□ 3.83
CSNK1E-204ENST00000403904 NAP1L2Q9ULW6 460 aaPredicted RBP38.95■■■■□ 3.83
CSNK1E-204ENST00000403904 GTF2A2P52657 109 aa38.94■■■■□ 3.82
CSNK1E-204ENST00000403904 APOA5Q6Q788 366 aa38.94■■■■□ 3.82
CSNK1E-204ENST00000403904 TMOD4Q9NZQ9 345 aa38.94■■■■□ 3.82
CSNK1E-204ENST00000403904 HSPA6P17066 643 aa38.93■■■■□ 3.82
CSNK1E-204ENST00000403904 TROAPQ12815 778 aa38.93■■■■□ 3.82
CSNK1E-204ENST00000403904 NUP133Q8WUM0 1156 aa38.92■■■■□ 3.82
CSNK1E-204ENST00000403904 CAPNS2Q96L46 248 aa38.92■■■■□ 3.82
CSNK1E-204ENST00000403904 CD2BP2O95400 341 aaKnown RBP38.91■■■■□ 3.82
CSNK1E-204ENST00000403904 PDHBP11177 359 aa38.91■■■■□ 3.82
CSNK1E-204ENST00000403904 RXRAP19793 462 aa38.91■■■■□ 3.82
CSNK1E-204ENST00000403904 SYNE3Q6ZMZ3 975 aa38.91■■■■□ 3.82
CSNK1E-204ENST00000403904 GADL1Q6ZQY3 521 aa38.91■■■■□ 3.82
CSNK1E-204ENST00000403904 LPAR1Q92633 364 aa38.91■■■■□ 3.82
CSNK1E-204ENST00000403904 C12orf42Q96LP6 360 aa38.91■■■■□ 3.82
CSNK1E-204ENST00000403904 NUP88Q99567 741 aaPredicted RBP38.91■■■■□ 3.82
CSNK1E-204ENST00000403904 EVCP57679 992 aa38.91■■■■□ 3.82
CSNK1E-204ENST00000403904 MOGSQ13724 837 aa38.91■■■■□ 3.82
CSNK1E-204ENST00000403904 MICU3Q86XE3 530 aa38.91■■■■□ 3.82
CSNK1E-204ENST00000403904 TPCN1Q9ULQ1 816 aa38.91■■■■□ 3.82
CSNK1E-204ENST00000403904 VCAM1P19320 739 aa38.9■■■■□ 3.82
CSNK1E-204ENST00000403904 LOC285556D6RIA3 1793 aa38.9■■■■□ 3.82
CSNK1E-204ENST00000403904 CCL15-CCL14A0A0B4J2E2 113 aa38.89■■■■□ 3.82
CSNK1E-204ENST00000403904 ZBTB43O43298 467 aa38.89■■■■□ 3.82
CSNK1E-204ENST00000403904 DDAH1O94760 285 aa38.89■■■■□ 3.82
CSNK1E-204ENST00000403904 CETPP11597 493 aa38.89■■■■□ 3.82
CSNK1E-204ENST00000403904 SLC1A4P43007 532 aa38.89■■■■□ 3.82
CSNK1E-204ENST00000403904 CCL15Q16663 113 aa38.89■■■■□ 3.82
CSNK1E-204ENST00000403904 CCDC144CPQ8IYA2 1237 aa38.89■■■■□ 3.82
CSNK1E-204ENST00000403904 IL27Q8NEV9 243 aa38.89■■■■□ 3.82
CSNK1E-204ENST00000403904 GMCL1Q96IK5 515 aa38.89■■■■□ 3.82
CSNK1E-204ENST00000403904 GOLGA8BA8MQT2 603 aa38.88■■■■□ 3.81
CSNK1E-204ENST00000403904 SNHG28P0DPA3 235 aa38.88■■■■□ 3.81
CSNK1E-204ENST00000403904 PROCA1Q8NCQ7 364 aaPredicted RBP38.88■■■■□ 3.81
CSNK1E-204ENST00000403904 FAM83BQ5T0W9 1011 aa38.87■■■■□ 3.81
CSNK1E-204ENST00000403904 TREML2Q5T2D2 321 aa38.87■■■■□ 3.81
CSNK1E-204ENST00000403904 FASTKD5Q7L8L6 764 aaKnown RBP38.87■■■■□ 3.81
CSNK1E-204ENST00000403904 DCAF4Q8WV16 495 aa38.87■■■■□ 3.81
CSNK1E-204ENST00000403904 BRI3BPQ8WY22 251 aa38.87■■■■□ 3.81
CSNK1E-204ENST00000403904 ZIC5Q96T25 663 aa38.87■■■■□ 3.81
CSNK1E-204ENST00000403904 ISY1Q9ULR0 285 aaKnown RBP38.87■■■■□ 3.81
CSNK1E-204ENST00000403904 PDIA3P30101 505 aaKnown RBP38.87■■■■□ 3.81
CSNK1E-204ENST00000403904 KCTD1Q719H9 257 aa38.87■■■■□ 3.81
Retrieved 100 of 20,778 RNA–protein pairs in 711.3 ms