RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 F5H6K3 240 aa20.26■□□□□ 0.83
PTCHD3P3-201ENST00000403073 NOVP48745 357 aa20.26■□□□□ 0.83
PTCHD3P3-201ENST00000403073 KLRC3Q07444 240 aa20.26■□□□□ 0.83
PTCHD3P3-201ENST00000403073 RALYLQ86SE5 291 aaKnown RBP20.26■□□□□ 0.83
PTCHD3P3-201ENST00000403073 RPAP3Q9H6T3 665 aaPredicted RBP20.26■□□□□ 0.83
PTCHD3P3-201ENST00000403073 GOPCQ9HD26 462 aa20.26■□□□□ 0.83
PTCHD3P3-201ENST00000403073 SEC24BO95487 1268 aa20.25■□□□□ 0.83
PTCHD3P3-201ENST00000403073 HSPA8P11142 646 aaKnown RBP20.25■□□□□ 0.83
PTCHD3P3-201ENST00000403073 OSBPP22059 807 aa20.25■□□□□ 0.83
PTCHD3P3-201ENST00000403073 HOXA7P31268 230 aaPredicted RBP20.25■□□□□ 0.83
PTCHD3P3-201ENST00000403073 HSPA4P34932 840 aa20.25■□□□□ 0.83
PTCHD3P3-201ENST00000403073 NT5C2P49902 561 aa20.25■□□□□ 0.83
PTCHD3P3-201ENST00000403073 PABPC4Q13310 644 aaKnown RBP eCLIP20.25■□□□□ 0.83
PTCHD3P3-201ENST00000403073 PPP4R3BQ5MIZ7 849 aa20.25■□□□□ 0.83
PTCHD3P3-201ENST00000403073 RCSD1Q6JBY9 416 aa20.25■□□□□ 0.83
PTCHD3P3-201ENST00000403073 CHST3Q7LGC8 479 aa20.25■□□□□ 0.83
PTCHD3P3-201ENST00000403073 IQCA1Q86XH1 822 aa20.25■□□□□ 0.83
PTCHD3P3-201ENST00000403073 CHMP4CQ96CF2 233 aa20.25■□□□□ 0.83
PTCHD3P3-201ENST00000403073 ZSCAN10Q96SZ4 725 aaPredicted RBP20.25■□□□□ 0.83
PTCHD3P3-201ENST00000403073 CFHR5Q9BXR6 569 aa20.25■□□□□ 0.83
PTCHD3P3-201ENST00000403073 ASCC2Q9H1I8 757 aaPredicted RBP20.25■□□□□ 0.83
PTCHD3P3-201ENST00000403073 USP17L15C9J2P7 530 aa20.24■□□□□ 0.83
PTCHD3P3-201ENST00000403073 USP17L13C9JLJ4 530 aa20.24■□□□□ 0.83
PTCHD3P3-201ENST00000403073 USP17L11C9JVI0 530 aa20.24■□□□□ 0.83
PTCHD3P3-201ENST00000403073 USP17L18D6R9N7 530 aa20.24■□□□□ 0.83
PTCHD3P3-201ENST00000403073 USP17L22D6RA61 530 aa20.24■□□□□ 0.83
PTCHD3P3-201ENST00000403073 USP17L17D6RBQ6 530 aa20.24■□□□□ 0.83
PTCHD3P3-201ENST00000403073 USP17L19D6RCP7 530 aa20.24■□□□□ 0.83
PTCHD3P3-201ENST00000403073 USP17L20D6RJB6 530 aa20.24■□□□□ 0.83
PTCHD3P3-201ENST00000403073 CTCFP49711 727 aaPredicted RBP20.24■□□□□ 0.83
PTCHD3P3-201ENST00000403073 USP17L24Q0WX57 530 aa20.24■□□□□ 0.83
PTCHD3P3-201ENST00000403073 COL9A3Q14050 684 aaPredicted RBP20.24■□□□□ 0.83
PTCHD3P3-201ENST00000403073 LPAR1Q92633 364 aa20.24■□□□□ 0.83
PTCHD3P3-201ENST00000403073 TTC14Q96N46 770 aa20.24■□□□□ 0.83
PTCHD3P3-201ENST00000403073 PARK7Q99497 189 aaKnown RBP20.24■□□□□ 0.83
PTCHD3P3-201ENST00000403073 P2RX7Q99572 595 aaKnown RBP20.24■□□□□ 0.83
PTCHD3P3-201ENST00000403073 TMEM47Q9BQJ4 181 aa20.24■□□□□ 0.83
PTCHD3P3-201ENST00000403073 NDUFB10O96000 172 aa20.23■□□□□ 0.83
PTCHD3P3-201ENST00000403073 ZKSCAN1P17029 563 aaPredicted RBP20.23■□□□□ 0.83
PTCHD3P3-201ENST00000403073 LBX1P52954 281 aa20.23■□□□□ 0.83
PTCHD3P3-201ENST00000403073 TSGA10IPQ3SY00 556 aa20.23■□□□□ 0.83
PTCHD3P3-201ENST00000403073 C8orf34Q49A92 452 aa20.23■□□□□ 0.83
PTCHD3P3-201ENST00000403073 CATSPERGQ6ZRH7 1159 aa20.23■□□□□ 0.83
PTCHD3P3-201ENST00000403073 DGKHQ86XP1 1220 aa20.23■□□□□ 0.83
PTCHD3P3-201ENST00000403073 MB21D2Q8IYB1 491 aaPredicted RBP20.23■□□□□ 0.83
PTCHD3P3-201ENST00000403073 KCNB2Q92953 911 aa20.23■□□□□ 0.83
PTCHD3P3-201ENST00000403073 NUP88Q99567 741 aaPredicted RBP20.23■□□□□ 0.83
PTCHD3P3-201ENST00000403073 UBAC1Q9BSL1 405 aa20.23■□□□□ 0.83
PTCHD3P3-201ENST00000403073 CPA4Q9UI42 421 aa20.23■□□□□ 0.83
PTCHD3P3-201ENST00000403073 PNMA3Q9UL41 463 aa20.23■□□□□ 0.83
PTCHD3P3-201ENST00000403073 GREB1LQ9C091 1923 aaPredicted RBP20.22■□□□□ 0.83
PTCHD3P3-201ENST00000403073 GPR25O00155 361 aa20.22■□□□□ 0.83
PTCHD3P3-201ENST00000403073 WDR46O15213 610 aaKnown RBP20.22■□□□□ 0.83
PTCHD3P3-201ENST00000403073 EPB41L2O43491 1005 aaKnown RBP20.22■□□□□ 0.83
PTCHD3P3-201ENST00000403073 TLR2O60603 784 aa20.22■□□□□ 0.83
PTCHD3P3-201ENST00000403073 TOP1P11387 765 aaKnown RBP20.22■□□□□ 0.83
PTCHD3P3-201ENST00000403073 ANTXR2P58335 489 aa20.22■□□□□ 0.83
PTCHD3P3-201ENST00000403073 IRX3P78415 501 aaPredicted RBP20.22■□□□□ 0.83
PTCHD3P3-201ENST00000403073 ADCK5Q3MIX3 580 aa20.22■□□□□ 0.83
PTCHD3P3-201ENST00000403073 CCDC178Q5BJE1 867 aa20.22■□□□□ 0.83
PTCHD3P3-201ENST00000403073 FAM83BQ5T0W9 1011 aa20.22■□□□□ 0.83
PTCHD3P3-201ENST00000403073 SLFN13Q68D06 897 aa20.22■□□□□ 0.83
PTCHD3P3-201ENST00000403073 ENAHQ8N8S7 591 aaPredicted RBP20.22■□□□□ 0.83
PTCHD3P3-201ENST00000403073 GMCL1P1Q8NEA9 526 aa20.22■□□□□ 0.83
PTCHD3P3-201ENST00000403073 TANGO6Q9C0B7 1094 aa20.22■□□□□ 0.83
PTCHD3P3-201ENST00000403073 SYNPO2Q9UMS6 1093 aa20.22■□□□□ 0.83
PTCHD3P3-201ENST00000403073 MTMR7Q9Y216 660 aa20.22■□□□□ 0.83
PTCHD3P3-201ENST00000403073 SNX14Q9Y5W7 946 aa20.22■□□□□ 0.83
PTCHD3P3-201ENST00000403073 LAMA4Q16363 1823 aa20.22■□□□□ 0.83
PTCHD3P3-201ENST00000403073 TNKSO95271 1327 aa20.22■□□□□ 0.83
PTCHD3P3-201ENST00000403073 SMCR8Q8TEV9 937 aaPredicted RBP20.21■□□□□ 0.83
PTCHD3P3-201ENST00000403073 ANKS1AQ92625 1134 aa20.21■□□□□ 0.83
PTCHD3P3-201ENST00000403073 NEK1Q96PY6 1258 aa20.21■□□□□ 0.83
PTCHD3P3-201ENST00000403073 MYH8P13535 1937 aa20.21■□□□□ 0.83
PTCHD3P3-201ENST00000403073 IFIT3O14879 490 aaKnown RBP20.2■□□□□ 0.82
PTCHD3P3-201ENST00000403073 PRC1O43663 620 aa20.2■□□□□ 0.82
PTCHD3P3-201ENST00000403073 MCCP23508 829 aa20.2■□□□□ 0.82
PTCHD3P3-201ENST00000403073 SEC23AQ15436 765 aa20.2■□□□□ 0.82
PTCHD3P3-201ENST00000403073 C17orf99Q6UX52 265 aa20.2■□□□□ 0.82
PTCHD3P3-201ENST00000403073 RASGRP2Q7LDG7 609 aa20.2■□□□□ 0.82
PTCHD3P3-201ENST00000403073 ADGRA2Q96PE1 1338 aa20.2■□□□□ 0.82
PTCHD3P3-201ENST00000403073 PEX10O60683 326 aa20.19■□□□□ 0.82
PTCHD3P3-201ENST00000403073 MCM5P33992 734 aa20.19■□□□□ 0.82
PTCHD3P3-201ENST00000403073 HERVK_113P62684 666 aa20.19■□□□□ 0.82
PTCHD3P3-201ENST00000403073 KRT32Q14532 448 aa20.19■□□□□ 0.82
PTCHD3P3-201ENST00000403073 COG2Q14746 738 aa20.19■□□□□ 0.82
PTCHD3P3-201ENST00000403073 POTEEQ6S8J3 1075 aa20.19■□□□□ 0.82
PTCHD3P3-201ENST00000403073 SAMD1Q6SPF0 538 aaPredicted RBP20.19■□□□□ 0.82
PTCHD3P3-201ENST00000403073 ZNF296Q8WUU4 475 aaPredicted RBP20.19■□□□□ 0.82
PTCHD3P3-201ENST00000403073 KAT14Q9H8E8 782 aa20.19■□□□□ 0.82
PTCHD3P3-201ENST00000403073 SENP2Q9HC62 589 aa20.19■□□□□ 0.82
PTCHD3P3-201ENST00000403073 GPHNQ9NQX3 736 aaPredicted RBP20.19■□□□□ 0.82
PTCHD3P3-201ENST00000403073 PCNTO95613 3336 aa20.19■□□□□ 0.82
PTCHD3P3-201ENST00000403073 LOC285556D6RIA3 1793 aa20.18■□□□□ 0.82
PTCHD3P3-201ENST00000403073 FLOT1O75955 427 aa20.18■□□□□ 0.82
PTCHD3P3-201ENST00000403073 BMP3P12645 472 aa20.18■□□□□ 0.82
PTCHD3P3-201ENST00000403073 TMEM67Q5HYA8 995 aa20.18■□□□□ 0.82
PTCHD3P3-201ENST00000403073 IFIT1BQ5T764 474 aaKnown RBP20.18■□□□□ 0.82
PTCHD3P3-201ENST00000403073 ANKRD13CQ8N6S4 541 aa20.18■□□□□ 0.82
PTCHD3P3-201ENST00000403073 IGDCC4Q8TDY8 1250 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms