RNA–Protein interactions for RNA: ENST00000402458.1

SNU13-204, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 3 BASIC

Gene SNU13, Length 462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-204ENST00000402458 SH3D19Q5HYK7 790 aa16■□□□□ 0.15
SNU13-204ENST00000402458 IFIT1BQ5T764 474 aaKnown RBP16■□□□□ 0.15
SNU13-204ENST00000402458 CHST3Q7LGC8 479 aa16■□□□□ 0.15
SNU13-204ENST00000402458 SIAH1Q8IUQ4 282 aa16■□□□□ 0.15
SNU13-204ENST00000402458 PROCA1Q8NCQ7 364 aaPredicted RBP16■□□□□ 0.15
SNU13-204ENST00000402458 MS4A4AQ96JQ5 239 aa16■□□□□ 0.15
SNU13-204ENST00000402458 TM6SF1Q9BZW5 370 aa16■□□□□ 0.15
SNU13-204ENST00000402458 KAT14Q9H8E8 782 aa16■□□□□ 0.15
SNU13-204ENST00000402458 CYP46A1Q9Y6A2 500 aa16■□□□□ 0.15
SNU13-204ENST00000402458 A0A1W2PRG0 241 aa15.99■□□□□ 0.15
SNU13-204ENST00000402458 PABPC4Q13310 644 aaKnown RBP eCLIP15.99■□□□□ 0.153e-7■□□□□ 9.5
SNU13-204ENST00000402458 LRRC47Q8N1G4 583 aaKnown RBP15.99■□□□□ 0.15
SNU13-204ENST00000402458 TMTC2Q8N394 836 aa15.99■□□□□ 0.15
SNU13-204ENST00000402458 ENAHQ8N8S7 591 aaPredicted RBP15.99■□□□□ 0.15
SNU13-204ENST00000402458 LPAR1Q92633 364 aa15.99■□□□□ 0.15
SNU13-204ENST00000402458 TMEM47Q9BQJ4 181 aa15.99■□□□□ 0.15
SNU13-204ENST00000402458 VCPKMTQ9H867 229 aa15.99■□□□□ 0.15
SNU13-204ENST00000402458 TESPA1A2RU30 521 aaPredicted RBP15.98■□□□□ 0.15
SNU13-204ENST00000402458 TM4SF4P48230 202 aa15.98■□□□□ 0.15
SNU13-204ENST00000402458 NOVP48745 357 aa15.98■□□□□ 0.15
SNU13-204ENST00000402458 ANTXR2P58335 489 aa15.98■□□□□ 0.15
SNU13-204ENST00000402458 RUFY3Q7L099 469 aa15.98■□□□□ 0.15
SNU13-204ENST00000402458 GMCL1P1Q8NEA9 526 aa15.98■□□□□ 0.15
SNU13-204ENST00000402458 NKX2-3Q8TAU0 364 aa15.98■□□□□ 0.15
SNU13-204ENST00000402458 BRI3BPQ8WY22 251 aa15.98■□□□□ 0.15
SNU13-204ENST00000402458 ANKS1AQ92625 1134 aa15.98■□□□□ 0.15
SNU13-204ENST00000402458 C12orf42Q96LP6 360 aa15.98■□□□□ 0.15
SNU13-204ENST00000402458 EMILIN3Q9NT22 766 aa15.98■□□□□ 0.15
SNU13-204ENST00000402458 LOC285556D6RIA3 1793 aa15.98■□□□□ 0.15
SNU13-204ENST00000402458 F5H6K3 240 aa15.97■□□□□ 0.15
SNU13-204ENST00000402458 RPS6KB1P23443 525 aa15.97■□□□□ 0.15
SNU13-204ENST00000402458 RBM25P49756 843 aaKnown RBP15.97■□□□□ 0.15
SNU13-204ENST00000402458 KLRC3Q07444 240 aa15.97■□□□□ 0.15
SNU13-204ENST00000402458 SEC23AQ15436 765 aa15.97■□□□□ 0.15
SNU13-204ENST00000402458 SLFN13Q68D06 897 aa15.97■□□□□ 0.15
SNU13-204ENST00000402458 NFXL1Q6ZNB6 911 aa15.97■□□□□ 0.15
SNU13-204ENST00000402458 ANKRD23Q86SG2 305 aa15.97■□□□□ 0.15
SNU13-204ENST00000402458 ZSWIM6Q9HCJ5 1215 aa15.97■□□□□ 0.15
SNU13-204ENST00000402458 PNMA3Q9UL41 463 aa15.97■□□□□ 0.15
SNU13-204ENST00000402458 ISY1Q9ULR0 285 aaKnown RBP15.97■□□□□ 0.15
SNU13-204ENST00000402458 AGTPBP1Q9UPW5 1226 aa15.97■□□□□ 0.15
SNU13-204ENST00000402458 CCDC69A6NI79 296 aa15.96■□□□□ 0.15
SNU13-204ENST00000402458 BTBD19C9JJ37 291 aa15.96■□□□□ 0.15
SNU13-204ENST00000402458 SH2B2O14492 632 aaPredicted RBP15.96■□□□□ 0.15
SNU13-204ENST00000402458 WDR46O15213 610 aaKnown RBP15.96■□□□□ 0.15
SNU13-204ENST00000402458 NDUFB10O96000 172 aa15.96■□□□□ 0.15
SNU13-204ENST00000402458 ALDH1A1P00352 501 aa15.96■□□□□ 0.15
SNU13-204ENST00000402458 OSBPP22059 807 aa15.96■□□□□ 0.15
SNU13-204ENST00000402458 LIFRP42702 1097 aa15.96■□□□□ 0.15
SNU13-204ENST00000402458 EXOSC10Q01780 885 aaKnown RBP15.96■□□□□ 0.15
SNU13-204ENST00000402458 MAP2K1Q02750 393 aaPredicted RBP15.96■□□□□ 0.15
SNU13-204ENST00000402458 RCSD1Q6JBY9 416 aa15.96■□□□□ 0.15
SNU13-204ENST00000402458 SYNE3Q6ZMZ3 975 aa15.96■□□□□ 0.15
SNU13-204ENST00000402458 CATIPQ7Z7H3 387 aa15.96■□□□□ 0.15
SNU13-204ENST00000402458 IFNL1Q8IU54 200 aa15.96■□□□□ 0.15
SNU13-204ENST00000402458 SPICE1Q8N0Z3 855 aa15.96■□□□□ 0.15
SNU13-204ENST00000402458 DNAJC5GQ8N7S2 189 aa15.96■□□□□ 0.15
SNU13-204ENST00000402458 PNMA1Q8ND90 353 aa15.96■□□□□ 0.15
SNU13-204ENST00000402458 IGDCC4Q8TDY8 1250 aa15.96■□□□□ 0.15
SNU13-204ENST00000402458 ZIC5Q96T25 663 aa15.96■□□□□ 0.15
SNU13-204ENST00000402458 BEGAINQ9BUH8 593 aa15.96■□□□□ 0.15
SNU13-204ENST00000402458 LRRC2Q9BYS8 371 aa15.96■□□□□ 0.15
SNU13-204ENST00000402458 ZCCHC17Q9NP64 241 aaKnown RBP15.96■□□□□ 0.15
SNU13-204ENST00000402458 MTMR7Q9Y216 660 aa15.96■□□□□ 0.15
SNU13-204ENST00000402458 SLC45A1Q9Y2W3 748 aa15.96■□□□□ 0.15
SNU13-204ENST00000402458 THSD7BQ9C0I4 1608 aa15.95■□□□□ 0.14
SNU13-204ENST00000402458 USP17L15C9J2P7 530 aa15.95■□□□□ 0.14
SNU13-204ENST00000402458 USP17L13C9JLJ4 530 aa15.95■□□□□ 0.14
SNU13-204ENST00000402458 USP17L11C9JVI0 530 aa15.95■□□□□ 0.14
SNU13-204ENST00000402458 USP17L18D6R9N7 530 aa15.95■□□□□ 0.14
SNU13-204ENST00000402458 USP17L22D6RA61 530 aa15.95■□□□□ 0.14
SNU13-204ENST00000402458 USP17L17D6RBQ6 530 aa15.95■□□□□ 0.14
SNU13-204ENST00000402458 USP17L19D6RCP7 530 aa15.95■□□□□ 0.14
SNU13-204ENST00000402458 USP17L20D6RJB6 530 aa15.95■□□□□ 0.14
SNU13-204ENST00000402458 CPA1P15085 419 aa15.95■□□□□ 0.14
SNU13-204ENST00000402458 VCAM1P19320 739 aa15.95■□□□□ 0.14
SNU13-204ENST00000402458 SLC1A4P43007 532 aa15.95■□□□□ 0.14
SNU13-204ENST00000402458 USP17L24Q0WX57 530 aa15.95■□□□□ 0.14
SNU13-204ENST00000402458 DGKZQ13574 1117 aa15.95■□□□□ 0.14
SNU13-204ENST00000402458 MOGSQ13724 837 aa15.95■□□□□ 0.14
SNU13-204ENST00000402458 DCAF4Q8WV16 495 aa15.95■□□□□ 0.14
SNU13-204ENST00000402458 IL17RAQ96F46 866 aa15.95■□□□□ 0.14
SNU13-204ENST00000402458 GMCL1Q96IK5 515 aa15.95■□□□□ 0.14
SNU13-204ENST00000402458 TCEANC2Q96MN5 208 aa15.95■□□□□ 0.14
SNU13-204ENST00000402458 UPF3BQ9BZI7 483 aaKnown RBP15.95■□□□□ 0.14
SNU13-204ENST00000402458 TANGO6Q9C0B7 1094 aa15.95■□□□□ 0.14
SNU13-204ENST00000402458 RPAP3Q9H6T3 665 aaPredicted RBP15.95■□□□□ 0.14
SNU13-204ENST00000402458 LY9Q9HBG7 655 aa15.95■□□□□ 0.14
SNU13-204ENST00000402458 PDHXO00330 501 aa15.94■□□□□ 0.14
SNU13-204ENST00000402458 IRX3P78415 501 aaPredicted RBP15.94■□□□□ 0.14
SNU13-204ENST00000402458 CCDC96Q2M329 555 aa15.94■□□□□ 0.14
SNU13-204ENST00000402458 TREML2Q5T2D2 321 aa15.94■□□□□ 0.14
SNU13-204ENST00000402458 GPAT2Q6NUI2 795 aa15.94■□□□□ 0.14
SNU13-204ENST00000402458 Q6ZUG5 572 aa15.94■□□□□ 0.14
SNU13-204ENST00000402458 TBC1D32Q96NH3 1257 aa15.94■□□□□ 0.14
SNU13-204ENST00000402458 PTPN18Q99952 460 aa15.94■□□□□ 0.14
SNU13-204ENST00000402458 PDRG1Q9NUG6 133 aa15.94■□□□□ 0.14
SNU13-204ENST00000402458 IGF2BP3O00425 579 aaKnown RBP eCLIP15.93■□□□□ 0.14
SNU13-204ENST00000402458 BMP3P12645 472 aa15.93■□□□□ 0.14
SNU13-204ENST00000402458 HOXA7P31268 230 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms