RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 PATL2C9JE40 543 aaKnown RBP10.03□□□□□ -0.8
USP16-202ENST00000399973 SLC3A2P08195 630 aaKnown RBP10.03□□□□□ -0.8
USP16-202ENST00000399973 RASA1P20936 1047 aa10.03□□□□□ -0.8
USP16-202ENST00000399973 PPARAQ07869 468 aa10.03□□□□□ -0.8
USP16-202ENST00000399973 VPS53Q5VIR6 699 aa10.03□□□□□ -0.8
USP16-202ENST00000399973 WDR78Q5VTH9 848 aa10.03□□□□□ -0.8
USP16-202ENST00000399973 NBPF11Q86T75 865 aa10.03□□□□□ -0.8
USP16-202ENST00000399973 ARMC5Q96C12 935 aa10.03□□□□□ -0.8
USP16-202ENST00000399973 ZNF287Q9HBT7 754 aa10.03□□□□□ -0.8
USP16-202ENST00000399973 MORF4L1Q9UBU8 362 aa10.03□□□□□ -0.8
USP16-202ENST00000399973 GABRQQ9UN88 632 aa10.03□□□□□ -0.8
USP16-202ENST00000399973 CCDC171Q6TFL3 1326 aa10.03□□□□□ -0.8
USP16-202ENST00000399973 FRMPD3Q5JV73 1810 aa10.03□□□□□ -0.8
USP16-202ENST00000399973 EEF2P13639 858 aaKnown RBP10.02□□□□□ -0.81
USP16-202ENST00000399973 ELNP15502 786 aa10.02□□□□□ -0.81
USP16-202ENST00000399973 GRK4P32298 578 aa10.02□□□□□ -0.81
USP16-202ENST00000399973 FLT3LGP49771 235 aa10.02□□□□□ -0.81
USP16-202ENST00000399973 ERVK-9P63128 1117 aa10.02□□□□□ -0.81
USP16-202ENST00000399973 ERVK-24P63145 666 aa10.02□□□□□ -0.81
USP16-202ENST00000399973 CTDSPL2Q05D32 466 aa10.02□□□□□ -0.81
USP16-202ENST00000399973 PDE4BQ07343 736 aa10.02□□□□□ -0.81
USP16-202ENST00000399973 ZNF444Q8N0Y2 327 aaPredicted RBP10.02□□□□□ -0.81
USP16-202ENST00000399973 GPRC5AQ8NFJ5 357 aa10.02□□□□□ -0.81
USP16-202ENST00000399973 GTF3C2Q8WUA4 911 aaPredicted RBP10.02□□□□□ -0.81
USP16-202ENST00000399973 ZNF333Q96JL9 665 aa10.02□□□□□ -0.81
USP16-202ENST00000399973 TMEM106CQ9BVX2 250 aa10.02□□□□□ -0.81
USP16-202ENST00000399973 KANSL2Q9H9L4 492 aa10.02□□□□□ -0.81
USP16-202ENST00000399973 GOPCQ9HD26 462 aa10.02□□□□□ -0.81
USP16-202ENST00000399973 TXNRD2Q9NNW7 524 aa10.02□□□□□ -0.81
USP16-202ENST00000399973 HELLSQ9NRZ9 838 aa10.02□□□□□ -0.81
USP16-202ENST00000399973 TOMM22Q9NS69 142 aa10.02□□□□□ -0.81
USP16-202ENST00000399973 ISY1Q9ULR0 285 aaKnown RBP10.02□□□□□ -0.81
USP16-202ENST00000399973 TMX2Q9Y320 296 aa10.02□□□□□ -0.81
USP16-202ENST00000399973 ZNF236Q9UL36 1845 aa10.02□□□□□ -0.81
USP16-202ENST00000399973 PLXNA1Q9UIW2 1896 aa10.02□□□□□ -0.81
USP16-202ENST00000399973 POTEFA5A3E0 1075 aa10.01□□□□□ -0.81
USP16-202ENST00000399973 SPDYE16A6NNV3 312 aaPredicted RBP10.01□□□□□ -0.81
USP16-202ENST00000399973 FOXP2O15409 715 aa10.01□□□□□ -0.81
USP16-202ENST00000399973 ADCY3O60266 1144 aa10.01□□□□□ -0.81
USP16-202ENST00000399973 FLOT1O75955 427 aa10.01□□□□□ -0.81
USP16-202ENST00000399973 TSPY3P0CV98 308 aa10.01□□□□□ -0.81
USP16-202ENST00000399973 TSPY8P0CW00 308 aa10.01□□□□□ -0.81
USP16-202ENST00000399973 SDSP20132 328 aa10.01□□□□□ -0.81
USP16-202ENST00000399973 PDE4AP27815 886 aa10.01□□□□□ -0.81
USP16-202ENST00000399973 MCMDC2Q4G0Z9 681 aa10.01□□□□□ -0.81
USP16-202ENST00000399973 KIAA1755Q5JYT7 1200 aa10.01□□□□□ -0.81
USP16-202ENST00000399973 CATSPERGQ6ZRH7 1159 aa10.01□□□□□ -0.81
USP16-202ENST00000399973 ZNF589Q86UQ0 364 aaPredicted RBP10.01□□□□□ -0.81
USP16-202ENST00000399973 LRRC47Q8N1G4 583 aaKnown RBP10.01□□□□□ -0.81
USP16-202ENST00000399973 SLAIN1Q8ND83 568 aa10.01□□□□□ -0.81
USP16-202ENST00000399973 LPAR1Q92633 364 aa10.01□□□□□ -0.81
USP16-202ENST00000399973 PORCNQ9H237 461 aa10.01□□□□□ -0.81
USP16-202ENST00000399973 OSBPL3Q9H4L5 887 aa10.01□□□□□ -0.81
USP16-202ENST00000399973 VCPKMTQ9H867 229 aa10.01□□□□□ -0.81
USP16-202ENST00000399973 RBPJLQ9UBG7 517 aa10.01□□□□□ -0.81
USP16-202ENST00000399973 WDR46O15213 610 aaKnown RBP10□□□□□ -0.81
USP16-202ENST00000399973 MFAP1P55081 439 aaKnown RBP10□□□□□ -0.81
USP16-202ENST00000399973 UBXN2AP68543 259 aa10□□□□□ -0.81
USP16-202ENST00000399973 PLS1Q14651 629 aa10□□□□□ -0.81
USP16-202ENST00000399973 MTFR1Q15390 333 aa10□□□□□ -0.81
USP16-202ENST00000399973 FAM47AQ5JRC9 791 aa10□□□□□ -0.81
USP16-202ENST00000399973 RRP12Q5JTH9 1297 aaKnown RBP10□□□□□ -0.81
USP16-202ENST00000399973 FAM83BQ5T0W9 1011 aa10□□□□□ -0.81
USP16-202ENST00000399973 TTC22Q5TAA0 569 aa10□□□□□ -0.81
USP16-202ENST00000399973 CWC27Q6UX04 472 aaKnown RBP10□□□□□ -0.81
USP16-202ENST00000399973 SIAH1Q8IUQ4 282 aa10□□□□□ -0.81
USP16-202ENST00000399973 CEP95Q96GE4 821 aa10□□□□□ -0.81
USP16-202ENST00000399973 NUP88Q99567 741 aaPredicted RBP10□□□□□ -0.81
USP16-202ENST00000399973 GNL3Q9BVP2 549 aaKnown RBP eCLIP10□□□□□ -0.81
USP16-202ENST00000399973 RABGAP1Q9Y3P9 1069 aa10□□□□□ -0.81
USP16-202ENST00000399973 KIAA0100Q14667 2235 aaKnown RBP10□□□□□ -0.81
USP16-202ENST00000399973 PLIN4Q96Q06 1357 aa10□□□□□ -0.81
USP16-202ENST00000399973 TSPY2A6NKD2 308 aa9.99□□□□□ -0.81
USP16-202ENST00000399973 HIP1O00291 1037 aa9.99□□□□□ -0.81
USP16-202ENST00000399973 RANBP6O60518 1105 aaKnown RBP9.99□□□□□ -0.81
USP16-202ENST00000399973 CNMDO75829 334 aa9.99□□□□□ -0.81
USP16-202ENST00000399973 INHAP05111 366 aa9.99□□□□□ -0.81
USP16-202ENST00000399973 CCL5P13501 91 aa9.99□□□□□ -0.81
USP16-202ENST00000399973 GSPT1P15170 499 aaKnown RBP9.99□□□□□ -0.81
USP16-202ENST00000399973 MAPK4P31152 587 aa9.99□□□□□ -0.81
USP16-202ENST00000399973 RGS19P49795 217 aa9.99□□□□□ -0.81
USP16-202ENST00000399973 HAND2P61296 217 aa9.99□□□□□ -0.81
USP16-202ENST00000399973 CCNA1P78396 465 aa9.99□□□□□ -0.81
USP16-202ENST00000399973 TFAP4Q01664 338 aa9.99□□□□□ -0.81
USP16-202ENST00000399973 GPR142Q7Z601 462 aa9.99□□□□□ -0.81
USP16-202ENST00000399973 SOCS4Q8WXH5 440 aa9.99□□□□□ -0.81
USP16-202ENST00000399973 CHMP4CQ96CF2 233 aa9.99□□□□□ -0.81
USP16-202ENST00000399973 ATG4CQ96DT6 458 aa9.99□□□□□ -0.81
USP16-202ENST00000399973 BTBD7Q9P203 1132 aa9.99□□□□□ -0.81
USP16-202ENST00000399973 CLIP2Q9UDT6 1046 aa9.99□□□□□ -0.81
USP16-202ENST00000399973 CENPFP49454 3210 aa9.99□□□□□ -0.81
USP16-202ENST00000399973 ZNFX1Q9P2E3 1918 aaKnown RBP9.98□□□□□ -0.81
USP16-202ENST00000399973 HSPD1P10809 573 aaKnown RBP9.98□□□□□ -0.81
USP16-202ENST00000399973 EN2P19622 333 aaPredicted RBP9.98□□□□□ -0.81
USP16-202ENST00000399973 CYP2B6P20813 491 aa9.98□□□□□ -0.81
USP16-202ENST00000399973 IRF5Q13568 498 aa9.98□□□□□ -0.81
USP16-202ENST00000399973 COG2Q14746 738 aa9.98□□□□□ -0.81
USP16-202ENST00000399973 Q3C1V9 767 aa9.98□□□□□ -0.81
USP16-202ENST00000399973 POTEEQ6S8J3 1075 aa9.98□□□□□ -0.81
USP16-202ENST00000399973 PLEKHH3Q7Z736 793 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms