RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 HP1BP3Q5SSJ5 553 aaPredicted RBP9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 RUNDC3BQ96NL0 473 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 ANAPC5Q9UJX4 755 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 SRGAP2BP0DMP2 458 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 PPP2R5CQ13362 524 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 ERO1AQ96HE7 468 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 FHDC1Q9C0D6 1143 aaPredicted RBP9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 ASIC3Q9UHC3 531 aa9.42□□□□□ -0.9
CACNA1C-220ENST00000399655 IQCA1LA6NCM1 817 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 CASP14P31944 242 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 CDKL2Q92772 493 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 MTRQ99707 1265 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 CASP2P42575 452 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 SCG3Q8WXD2 468 aaKnown RBP9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 KNL1Q8NG31 2342 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 EPB41P11171 864 aaKnown RBP9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 WASHC5Q12768 1159 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 C18orf25Q96B23 403 aaPredicted RBP9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 ATG3Q9NT62 314 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 GOLGA8FQ08AF8 430 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 GOLGA8DPQ0D2H9 430 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 KLHL24Q6TFL4 600 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 OSBPL10Q9BXB5 764 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 CLTAP09496 248 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 YWHAEP62258 255 aaKnown RBP9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 PTK2BQ14289 1009 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 SAAL1Q96ER3 474 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 ABCF3Q9NUQ8 709 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 FOSL2P15408 326 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 IKBIPQ70UQ0 350 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 TYW5A2RUC4 315 aaKnown RBP9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 FOXP3Q9BZS1 431 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 VPS16Q9H269 839 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 TRPC5Q9UL62 973 aaPredicted RBP9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 RGS20O76081 388 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 HLA-DOAP06340 250 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 USP48Q86UV5 1035 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 FAM178BQ8IXR5 827 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 SKA2Q8WVK7 121 aaPredicted RBP9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 HMOX1P09601 288 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 PSMC1P62191 440 aaKnown RBP9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 RFT1Q96AA3 541 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 FKBP14Q9NWM8 211 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 ORC3Q9UBD5 711 aaPredicted RBP9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 P4HA1P13674 534 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 STON1Q9Y6Q2 735 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 RAD51AP2Q09MP3 1159 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 MAP3K12Q12852 859 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 TEX11Q8IYF3 940 aa9.41□□□□□ -0.9
CACNA1C-220ENST00000399655 CARD10Q9BWT7 1032 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 BRIP1Q9BX63 1249 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 SPZ1Q9BXG8 430 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 ASPSCR1Q9BZE9 553 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 SPDYE2BA6NHP3 402 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 SPDYE6P0CI01 402 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 MSH2P43246 934 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 KAZNQ674X7 775 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 PPP4R3CPQ6ZMV5 832 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 SYNPO2Q9UMS6 1093 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 C16orf96A6NNT2 1141 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 OATP04181 439 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 E4F1Q66K89 784 aaPredicted RBP9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 FAM200AQ8TCP9 573 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 NDE1Q9NXR1 346 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 CATSPER1Q8NEC5 780 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 TRAK1Q9UPV9 953 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 NUTM2FA1L443 756 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 GOLGA8KD6RF30 607 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 NUTM2GQ5VZR2 741 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 MLPHQ9BV36 600 aaPredicted RBP9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 NHEJ1Q9H9Q4 299 aaPredicted RBP9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 FMN1Q68DA7 1419 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 GPC4O75487 556 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 CAPN1P07384 714 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 TTLL7Q6ZT98 887 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 NECTIN2Q92692 538 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 MBIPQ9NS73 344 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 WARS2Q9UGM6 360 aaKnown RBP9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 TTF2Q9UNY4 1162 aaKnown RBP9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 SERPINB1P30740 379 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 POLR2BP30876 1174 aaKnown RBP9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 PMS2P54278 862 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 C6orf203Q9P0P8 240 aaPredicted RBP9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 CEP126Q9P2H0 1117 aa9.4□□□□□ -0.9
CACNA1C-220ENST00000399655 S100A1P23297 94 aa9.4□□□□□ -0.91
CACNA1C-220ENST00000399655 POLE2P56282 527 aa9.4□□□□□ -0.91
CACNA1C-220ENST00000399655 ART3Q13508 389 aa9.4□□□□□ -0.91
CACNA1C-220ENST00000399655 HEXIM1O94992 359 aaKnown RBP9.4□□□□□ -0.91
CACNA1C-220ENST00000399655 BRDTQ58F21 947 aaPredicted RBP9.4□□□□□ -0.91
CACNA1C-220ENST00000399655 ASZ1Q8WWH4 475 aa9.4□□□□□ -0.91
CACNA1C-220ENST00000399655 OLA1Q9NTK5 396 aaKnown RBP9.4□□□□□ -0.91
CACNA1C-220ENST00000399655 ING3Q9NXR8 418 aa9.4□□□□□ -0.91
CACNA1C-220ENST00000399655 MMS22LQ6ZRQ5 1243 aa9.4□□□□□ -0.91
CACNA1C-220ENST00000399655 GOLGA5Q8TBA6 731 aa9.4□□□□□ -0.91
CACNA1C-220ENST00000399655 SCYL1Q96KG9 808 aa9.4□□□□□ -0.91
CACNA1C-220ENST00000399655 KCNG1Q9UIX4 513 aa9.4□□□□□ -0.91
CACNA1C-220ENST00000399655 IMPDH2P12268 514 aa9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 NOLC1Q14978 699 aaKnown RBP eCLIP9.39□□□□□ -0.91
CACNA1C-220ENST00000399655 ESRP1Q6NXG1 681 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms