RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 PHF20Q9BVI0 1012 aa13.5□□□□□ -0.25
COL25A1-202ENST00000399127 NAT10Q9H0A0 1025 aaKnown RBP13.5□□□□□ -0.25
COL25A1-202ENST00000399127 TMX4Q9H1E5 349 aaPredicted RBP13.5□□□□□ -0.25
COL25A1-202ENST00000399127 KAT14Q9H8E8 782 aa13.5□□□□□ -0.25
COL25A1-202ENST00000399127 CLIP2Q9UDT6 1046 aa13.5□□□□□ -0.25
COL25A1-202ENST00000399127 FBXO2Q9UK22 296 aaPredicted RBP13.5□□□□□ -0.25
COL25A1-202ENST00000399127 TSPY3P0CV98 308 aa13.49□□□□□ -0.25
COL25A1-202ENST00000399127 TSPY8P0CW00 308 aa13.49□□□□□ -0.25
COL25A1-202ENST00000399127 IL1R1P14778 569 aa13.49□□□□□ -0.25
COL25A1-202ENST00000399127 ALDH1B1P30837 517 aa13.49□□□□□ -0.25
COL25A1-202ENST00000399127 C15orf52Q6ZUT6 534 aaKnown RBP13.49□□□□□ -0.25
COL25A1-202ENST00000399127 USP49Q70CQ1 688 aa13.49□□□□□ -0.25
COL25A1-202ENST00000399127 SP8Q8IXZ3 490 aa13.49□□□□□ -0.25
COL25A1-202ENST00000399127 MASTLQ96GX5 879 aa13.49□□□□□ -0.25
COL25A1-202ENST00000399127 STX8Q9UNK0 236 aa13.49□□□□□ -0.25
COL25A1-202ENST00000399127 DLEC1Q9Y238 1755 aa13.49□□□□□ -0.25
COL25A1-202ENST00000399127 H0YIN7 160 aa13.49□□□□□ -0.25
COL25A1-202ENST00000399127 ADAMTS3O15072 1205 aa13.49□□□□□ -0.25
COL25A1-202ENST00000399127 LDHCP07864 332 aa13.49□□□□□ -0.25
COL25A1-202ENST00000399127 CHRNA5P30532 468 aa13.49□□□□□ -0.25
COL25A1-202ENST00000399127 GTF2IP78347 998 aa13.49□□□□□ -0.25
COL25A1-202ENST00000399127 RASGRP2Q7LDG7 609 aa13.49□□□□□ -0.25
COL25A1-202ENST00000399127 AMOTL1Q8IY63 956 aa13.49□□□□□ -0.25
COL25A1-202ENST00000399127 TEX11Q8IYF3 940 aa13.49□□□□□ -0.25
COL25A1-202ENST00000399127 STAG2Q8N3U4 1231 aa13.49□□□□□ -0.25
COL25A1-202ENST00000399127 PNMA1Q8ND90 353 aa13.49□□□□□ -0.25
COL25A1-202ENST00000399127 CNNM3Q8NE01 707 aa13.49□□□□□ -0.25
COL25A1-202ENST00000399127 ATP6V0A2Q9Y487 856 aa13.49□□□□□ -0.25
COL25A1-202ENST00000399127 PPP4CP60510 307 aa13.48□□□□□ -0.25
COL25A1-202ENST00000399127 NOLC1Q14978 699 aaKnown RBP eCLIP13.48□□□□□ -0.25
COL25A1-202ENST00000399127 CCDC144BQ3MJ40 725 aa13.48□□□□□ -0.25
COL25A1-202ENST00000399127 DNTTIP2Q5QJE6 756 aaKnown RBP13.48□□□□□ -0.25
COL25A1-202ENST00000399127 TAF3Q5VWG9 929 aa13.48□□□□□ -0.25
COL25A1-202ENST00000399127 METTL16Q86W50 562 aaKnown RBP13.48□□□□□ -0.25
COL25A1-202ENST00000399127 POLR2DO15514 142 aaKnown RBP13.48□□□□□ -0.25
COL25A1-202ENST00000399127 NPY5RQ15761 445 aa13.48□□□□□ -0.25
COL25A1-202ENST00000399127 ZNF444Q8N0Y2 327 aaPredicted RBP13.48□□□□□ -0.25
COL25A1-202ENST00000399127 GPKOWQ92917 476 aaPredicted RBP eCLIP13.48□□□□□ -0.25
COL25A1-202ENST00000399127 MXD3Q9BW11 206 aa13.48□□□□□ -0.25
COL25A1-202ENST00000399127 RGPD3A6NKT7 1758 aaPredicted RBP13.47□□□□□ -0.25
COL25A1-202ENST00000399127 RGPD4Q7Z3J3 1758 aa13.47□□□□□ -0.25
COL25A1-202ENST00000399127 ANKRD31Q8N7Z5 1873 aa13.47□□□□□ -0.25
COL25A1-202ENST00000399127 PTPREP23469 700 aa13.47□□□□□ -0.25
COL25A1-202ENST00000399127 NLRP12P59046 1061 aa13.47□□□□□ -0.25
COL25A1-202ENST00000399127 TMED8Q6PL24 325 aaPredicted RBP13.47□□□□□ -0.25
COL25A1-202ENST00000399127 KRBA2Q6ZNG9 492 aa13.47□□□□□ -0.25
COL25A1-202ENST00000399127 FOXP4Q8IVH2 680 aaPredicted RBP13.47□□□□□ -0.25
COL25A1-202ENST00000399127 TIGD1Q96MW7 591 aa13.47□□□□□ -0.25
COL25A1-202ENST00000399127 CSRNP2Q9H175 543 aa13.47□□□□□ -0.25
COL25A1-202ENST00000399127 GPR75-ASB3A0A0A6YYF3 556 aa13.47□□□□□ -0.25
COL25A1-202ENST00000399127 TRIM75PA6NK02 468 aa13.47□□□□□ -0.25
COL25A1-202ENST00000399127 SCG2P13521 617 aa13.47□□□□□ -0.25
COL25A1-202ENST00000399127 ZNF174Q15697 407 aa13.47□□□□□ -0.25
COL25A1-202ENST00000399127 DPP8Q6V1X1 898 aaPredicted RBP13.47□□□□□ -0.25
COL25A1-202ENST00000399127 TMC4Q7Z404 712 aa13.47□□□□□ -0.25
COL25A1-202ENST00000399127 GRAMD1CQ8IYS0 662 aa13.47□□□□□ -0.25
COL25A1-202ENST00000399127 FLT1P17948 1338 aa13.46□□□□□ -0.25
COL25A1-202ENST00000399127 NAV1Q8NEY1 1877 aa13.46□□□□□ -0.25
COL25A1-202ENST00000399127 FAM237AA0A1B0GTK4 181 aa13.46□□□□□ -0.25
COL25A1-202ENST00000399127 GOLGA8HP0CJ92 632 aa13.46□□□□□ -0.25
COL25A1-202ENST00000399127 RASA1P20936 1047 aa13.46□□□□□ -0.25
COL25A1-202ENST00000399127 NLRP5P59047 1200 aa13.46□□□□□ -0.25
COL25A1-202ENST00000399127 PICALMQ13492 652 aa13.46□□□□□ -0.25
COL25A1-202ENST00000399127 ARID5BQ14865 1188 aa13.46□□□□□ -0.25
COL25A1-202ENST00000399127 DOK7Q18PE1 504 aa13.46□□□□□ -0.25
COL25A1-202ENST00000399127 SARM1Q6SZW1 724 aa13.46□□□□□ -0.25
COL25A1-202ENST00000399127 CPVLQ9H3G5 476 aa13.46□□□□□ -0.25
COL25A1-202ENST00000399127 G3V3G9 751 aa13.46□□□□□ -0.26
COL25A1-202ENST00000399127 KIF5BP33176 963 aa13.46□□□□□ -0.26
COL25A1-202ENST00000399127 DCAF8Q5TAQ9 597 aa13.46□□□□□ -0.26
COL25A1-202ENST00000399127 PIK3AP1Q6ZUJ8 805 aa13.46□□□□□ -0.26
COL25A1-202ENST00000399127 FILIP1Q7Z7B0 1213 aa13.46□□□□□ -0.26
COL25A1-202ENST00000399127 DGKHQ86XP1 1220 aa13.46□□□□□ -0.26
COL25A1-202ENST00000399127 BRMS1Q9HCU9 246 aa13.46□□□□□ -0.26
COL25A1-202ENST00000399127 SERTAD1Q9UHV2 236 aa13.46□□□□□ -0.26
COL25A1-202ENST00000399127 PCDHA5Q9Y5H7 936 aa13.46□□□□□ -0.26
COL25A1-202ENST00000399127 SRPRBQ9Y5M8 271 aaKnown RBP13.46□□□□□ -0.26
COL25A1-202ENST00000399127 ROBO3Q96MS0 1386 aa13.45□□□□□ -0.26
COL25A1-202ENST00000399127 CDK8P49336 464 aa13.45□□□□□ -0.26
COL25A1-202ENST00000399127 RHBDL3P58872 404 aa13.45□□□□□ -0.26
COL25A1-202ENST00000399127 CBX1P83916 185 aa13.45□□□□□ -0.26
COL25A1-202ENST00000399127 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.45□□□□□ -0.26
COL25A1-202ENST00000399127 KIAA1524Q8TCG1 905 aa13.45□□□□□ -0.26
COL25A1-202ENST00000399127 EPSTI1Q96J88 318 aa13.45□□□□□ -0.26
COL25A1-202ENST00000399127 ZC3H12CQ9C0D7 883 aaKnown RBP13.45□□□□□ -0.26
COL25A1-202ENST00000399127 CGNQ9P2M7 1197 aaKnown RBP13.45□□□□□ -0.26
COL25A1-202ENST00000399127 TUBE1Q9UJT0 475 aa13.45□□□□□ -0.26
COL25A1-202ENST00000399127 CEP131Q9UPN4 1083 aa13.45□□□□□ -0.26
COL25A1-202ENST00000399127 CDK5RAP2Q96SN8 1893 aa13.45□□□□□ -0.26
COL25A1-202ENST00000399127 TPM3P06753 285 aa13.45□□□□□ -0.26
COL25A1-202ENST00000399127 PRR29P0C7W0 189 aa13.45□□□□□ -0.26
COL25A1-202ENST00000399127 LMOD1P29536 600 aaPredicted RBP13.45□□□□□ -0.26
COL25A1-202ENST00000399127 PFKFB3Q16875 520 aaPredicted RBP13.45□□□□□ -0.26
COL25A1-202ENST00000399127 RASGRP4Q8TDF6 673 aa13.45□□□□□ -0.26
COL25A1-202ENST00000399127 CACTINQ8WUQ7 758 aaKnown RBP13.45□□□□□ -0.26
COL25A1-202ENST00000399127 TNFRSF25Q93038 417 aa13.45□□□□□ -0.26
COL25A1-202ENST00000399127 TMEM47Q9BQJ4 181 aa13.45□□□□□ -0.26
COL25A1-202ENST00000399127 DAGLAQ9Y4D2 1042 aa13.45□□□□□ -0.26
COL25A1-202ENST00000399127 NRXN2Q9P2S2 1712 aa13.44□□□□□ -0.26
COL25A1-202ENST00000399127 SLC35G1Q2M3R5 365 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms