RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 SYNRGQ9UMZ2 1314 aa29.09■■■□□ 2.25
COL13A1-203ENST00000398969 WNT7AO00755 349 aa29.09■■■□□ 2.25
COL13A1-203ENST00000398969 ZRANB2O95218 330 aaKnown RBP eCLIP29.09■■■□□ 2.25
COL13A1-203ENST00000398969 ERFEQ4G0M1 354 aa29.09■■■□□ 2.25
COL13A1-203ENST00000398969 TBC1D9BQ66K14 1250 aa29.09■■■□□ 2.25
COL13A1-203ENST00000398969 ST7Q9NRC1 585 aa29.09■■■□□ 2.25
COL13A1-203ENST00000398969 RBM28Q9NW13 759 aaKnown RBP29.09■■■□□ 2.25
COL13A1-203ENST00000398969 MYH2Q9UKX2 1941 aa29.09■■■□□ 2.25
COL13A1-203ENST00000398969 SCN7AQ01118 1682 aa29.09■■■□□ 2.25
COL13A1-203ENST00000398969 CACNA1SQ13698 1873 aa29.09■■■□□ 2.25
COL13A1-203ENST00000398969 CYP2D7A0A087X1C5 515 aa29.09■■■□□ 2.25
COL13A1-203ENST00000398969 TEX33O43247 280 aa29.09■■■□□ 2.25
COL13A1-203ENST00000398969 BMP15O95972 392 aa29.09■■■□□ 2.25
COL13A1-203ENST00000398969 PNMA6AP0CW24 399 aaPredicted RBP29.09■■■□□ 2.25
COL13A1-203ENST00000398969 KIFC2Q96AC6 838 aa29.09■■■□□ 2.25
COL13A1-203ENST00000398969 DESI2Q9BSY9 194 aa29.09■■■□□ 2.25
COL13A1-203ENST00000398969 AKR1B15C9JRZ8 316 aaPredicted RBP29.08■■■□□ 2.25
COL13A1-203ENST00000398969 TPM1P09493 284 aa29.08■■■□□ 2.25
COL13A1-203ENST00000398969 CASP1P29466 404 aa29.08■■■□□ 2.25
COL13A1-203ENST00000398969 BICDL1Q6ZP65 573 aa29.08■■■□□ 2.25
COL13A1-203ENST00000398969 PANX2Q96RD6 677 aa29.08■■■□□ 2.25
COL13A1-203ENST00000398969 CDC5LQ99459 802 aaKnown RBP29.08■■■□□ 2.25
COL13A1-203ENST00000398969 GNL3LQ9NVN8 582 aaKnown RBP29.08■■■□□ 2.25
COL13A1-203ENST00000398969 LY75O60449 1722 aa29.08■■■□□ 2.25
COL13A1-203ENST00000398969 TROAPQ12815 778 aa29.08■■■□□ 2.25
COL13A1-203ENST00000398969 DPYDQ12882 1025 aa29.08■■■□□ 2.25
COL13A1-203ENST00000398969 KLHL10Q6JEL2 608 aa29.08■■■□□ 2.25
COL13A1-203ENST00000398969 TMCO3Q6UWJ1 677 aa29.08■■■□□ 2.25
COL13A1-203ENST00000398969 TNFRSF25Q93038 417 aa29.08■■■□□ 2.25
COL13A1-203ENST00000398969 BRIP1Q9BX63 1249 aa29.08■■■□□ 2.25
COL13A1-203ENST00000398969 MRFAP1Q9Y605 127 aa29.08■■■□□ 2.25
COL13A1-203ENST00000398969 DYNLL1P63167 89 aaKnown RBP29.07■■■□□ 2.24
COL13A1-203ENST00000398969 CDKAL1Q5VV42 579 aa29.07■■■□□ 2.24
COL13A1-203ENST00000398969 SRP68Q9UHB9 627 aaKnown RBP29.07■■■□□ 2.24
COL13A1-203ENST00000398969 RTCBQ9Y3I0 505 aaKnown RBP29.07■■■□□ 2.24
COL13A1-203ENST00000398969 STX17P56962 302 aa29.06■■■□□ 2.24
COL13A1-203ENST00000398969 MTF1Q14872 753 aa29.06■■■□□ 2.24
COL13A1-203ENST00000398969 NPY5RQ15761 445 aa29.06■■■□□ 2.24
COL13A1-203ENST00000398969 GSDMAQ96QA5 445 aa29.06■■■□□ 2.24
COL13A1-203ENST00000398969 FGRP09769 529 aa29.06■■■□□ 2.24
COL13A1-203ENST00000398969 IQCA1Q86XH1 822 aa29.06■■■□□ 2.24
COL13A1-203ENST00000398969 QTRT2Q9H974 415 aaKnown RBP29.06■■■□□ 2.24
COL13A1-203ENST00000398969 BRMS1Q9HCU9 246 aa29.06■■■□□ 2.24
COL13A1-203ENST00000398969 BAZ2AQ9UIF9 1905 aaKnown RBP29.06■■■□□ 2.24
COL13A1-203ENST00000398969 DLEC1Q9Y238 1755 aa29.05■■■□□ 2.24
COL13A1-203ENST00000398969 WTIPA6NIX2 430 aaPredicted RBP29.05■■■□□ 2.24
COL13A1-203ENST00000398969 CALM1P0DP23 149 aa29.05■■■□□ 2.24
COL13A1-203ENST00000398969 CALM2P0DP24 149 aa29.05■■■□□ 2.24
COL13A1-203ENST00000398969 CALM3P0DP25 149 aa29.05■■■□□ 2.24
COL13A1-203ENST00000398969 PBX1P40424 430 aa29.05■■■□□ 2.24
COL13A1-203ENST00000398969 ZNF174Q15697 407 aa29.05■■■□□ 2.24
COL13A1-203ENST00000398969 NOM1Q5C9Z4 860 aaKnown RBP29.05■■■□□ 2.24
COL13A1-203ENST00000398969 MRPL44Q9H9J2 332 aaKnown RBP29.05■■■□□ 2.24
COL13A1-203ENST00000398969 ADD3Q9UEY8 706 aaKnown RBP29.05■■■□□ 2.24
COL13A1-203ENST00000398969 SOWAHDA6NJG2 315 aa29.05■■■□□ 2.24
COL13A1-203ENST00000398969 ZPR1O75312 459 aa29.05■■■□□ 2.24
COL13A1-203ENST00000398969 TMTC3Q6ZXV5 915 aa29.05■■■□□ 2.24
COL13A1-203ENST00000398969 AMIGO3Q86WK7 504 aa29.05■■■□□ 2.24
COL13A1-203ENST00000398969 IGSF22Q8N9C0 903 aa29.05■■■□□ 2.24
COL13A1-203ENST00000398969 TAF1LQ8IZX4 1826 aa29.04■■■□□ 2.24
COL13A1-203ENST00000398969 PPP1R3GB7ZBB8 358 aa29.04■■■□□ 2.24
COL13A1-203ENST00000398969 CCDC175P0C221 793 aa29.04■■■□□ 2.24
COL13A1-203ENST00000398969 PPP2R3AQ06190 1150 aa29.04■■■□□ 2.24
COL13A1-203ENST00000398969 RBL2Q08999 1139 aa29.04■■■□□ 2.24
COL13A1-203ENST00000398969 KARSQ15046 597 aaKnown RBP29.04■■■□□ 2.24
COL13A1-203ENST00000398969 SF3B3Q15393 1217 aaKnown RBP29.04■■■□□ 2.24
COL13A1-203ENST00000398969 TTC38Q5R3I4 469 aa29.04■■■□□ 2.24
COL13A1-203ENST00000398969 C3orf67Q6ZVT6 689 aa29.04■■■□□ 2.24
COL13A1-203ENST00000398969 DDAH1O94760 285 aa29.04■■■□□ 2.24
COL13A1-203ENST00000398969 PCP11498 1178 aaKnown RBP29.04■■■□□ 2.24
COL13A1-203ENST00000398969 SMYD4Q8IYR2 804 aaPredicted RBP29.04■■■□□ 2.24
COL13A1-203ENST00000398969 A0A1B0GUL6 1792 aa29.03■■■□□ 2.24
COL13A1-203ENST00000398969 PLA2G4AP47712 749 aa29.03■■■□□ 2.24
COL13A1-203ENST00000398969 UBE4AQ14139 1066 aa29.03■■■□□ 2.24
COL13A1-203ENST00000398969 PPFIBP1Q86W92 1011 aa29.03■■■□□ 2.24
COL13A1-203ENST00000398969 ZNF384Q8TF68 577 aa29.03■■■□□ 2.24
COL13A1-203ENST00000398969 ARHGEF1Q92888 912 aaKnown RBP29.03■■■□□ 2.24
COL13A1-203ENST00000398969 SEMA3EO15041 775 aa29.03■■■□□ 2.24
COL13A1-203ENST00000398969 ATP2C1P98194 919 aaPredicted RBP29.03■■■□□ 2.24
COL13A1-203ENST00000398969 SLC10A5Q5PT55 438 aa29.03■■■□□ 2.24
COL13A1-203ENST00000398969 CTR9Q6PD62 1173 aa29.03■■■□□ 2.24
COL13A1-203ENST00000398969 CTAGE1Q96RT6 745 aa29.03■■■□□ 2.24
COL13A1-203ENST00000398969 SETDB2Q96T68 719 aa29.03■■■□□ 2.24
COL13A1-203ENST00000398969 NAA15Q9BXJ9 866 aaKnown RBP29.03■■■□□ 2.24
COL13A1-203ENST00000398969 CNTNAP5Q8WYK1 1306 aa29.02■■■□□ 2.24
COL13A1-203ENST00000398969 GTF2E1P29083 439 aaPredicted RBP29.02■■■□□ 2.24
COL13A1-203ENST00000398969 RSRC2Q7L4I2 434 aaKnown RBP29.02■■■□□ 2.24
COL13A1-203ENST00000398969 ANKRD18AQ8IVF6 992 aa29.02■■■□□ 2.24
COL13A1-203ENST00000398969 EPC1Q9H2F5 836 aa29.02■■■□□ 2.24
COL13A1-203ENST00000398969 PTGDRQ13258 359 aa29.01■■■□□ 2.24
COL13A1-203ENST00000398969 RAD9BQ6WBX8 426 aa29.01■■■□□ 2.24
COL13A1-203ENST00000398969 GPR161Q8N6U8 529 aaKnown RBP29.01■■■□□ 2.23
COL13A1-203ENST00000398969 ADGRG1Q9Y653 693 aa29.01■■■□□ 2.23
COL13A1-203ENST00000398969 CAVIN4Q5BKX8 364 aa29■■■□□ 2.23
COL13A1-203ENST00000398969 NYXQ9GZU5 481 aa29■■■□□ 2.23
COL13A1-203ENST00000398969 XDHP47989 1333 aa29■■■□□ 2.23
COL13A1-203ENST00000398969 FAM193AP78312 1265 aa29■■■□□ 2.23
COL13A1-203ENST00000398969 E2F4Q16254 413 aa29■■■□□ 2.23
COL13A1-203ENST00000398969 SRBD1Q8N5C6 995 aaKnown RBP29■■■□□ 2.23
COL13A1-203ENST00000398969 CCDC12Q8WUD4 166 aaPredicted RBP29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms