RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 MAP2K1Q02750 393 aaPredicted RBP20.44■□□□□ 0.86
CSNK1D-204ENST00000398519 KRT32Q14532 448 aa20.44■□□□□ 0.86
CSNK1D-204ENST00000398519 ANKRD23Q86SG2 305 aa20.44■□□□□ 0.86
CSNK1D-204ENST00000398519 VCPKMTQ9H867 229 aa20.44■□□□□ 0.86
CSNK1D-204ENST00000398519 TNKSO95271 1327 aa20.44■□□□□ 0.86
CSNK1D-204ENST00000398519 VCAM1P19320 739 aa20.43■□□□□ 0.86
CSNK1D-204ENST00000398519 MCCP23508 829 aa20.43■□□□□ 0.86
CSNK1D-204ENST00000398519 CHST3Q7LGC8 479 aa20.43■□□□□ 0.86
CSNK1D-204ENST00000398519 ENAHQ8N8S7 591 aaPredicted RBP20.43■□□□□ 0.86
CSNK1D-204ENST00000398519 NEK1Q96PY6 1258 aa20.43■□□□□ 0.86
CSNK1D-204ENST00000398519 UBAC1Q9BSL1 405 aa20.43■□□□□ 0.86
CSNK1D-204ENST00000398519 SYNPO2Q9UMS6 1093 aa20.43■□□□□ 0.86
CSNK1D-204ENST00000398519 PDHXO00330 501 aa20.42■□□□□ 0.86
CSNK1D-204ENST00000398519 DGKHQ86XP1 1220 aa20.42■□□□□ 0.86
CSNK1D-204ENST00000398519 SPICE1Q8N0Z3 855 aa20.42■□□□□ 0.86
CSNK1D-204ENST00000398519 TTC14Q96N46 770 aa20.42■□□□□ 0.86
CSNK1D-204ENST00000398519 TMEM47Q9BQJ4 181 aa20.42■□□□□ 0.86
CSNK1D-204ENST00000398519 GOPCQ9HD26 462 aa20.42■□□□□ 0.86
CSNK1D-204ENST00000398519 WBP1LQ9NX94 342 aa20.42■□□□□ 0.86
CSNK1D-204ENST00000398519 SEC23AQ15436 765 aa20.42■□□□□ 0.86
CSNK1D-204ENST00000398519 CCDC178Q5BJE1 867 aa20.42■□□□□ 0.86
CSNK1D-204ENST00000398519 OTUD7BQ6GQQ9 843 aa20.42■□□□□ 0.86
CSNK1D-204ENST00000398519 GMCL1P1Q8NEA9 526 aa20.42■□□□□ 0.86
CSNK1D-204ENST00000398519 LPAR1Q92633 364 aa20.42■□□□□ 0.86
CSNK1D-204ENST00000398519 ZCCHC17Q9NP64 241 aaKnown RBP20.42■□□□□ 0.86
CSNK1D-204ENST00000398519 RNF186Q9NXI6 227 aa20.42■□□□□ 0.86
CSNK1D-204ENST00000398519 F5H6K3 240 aa20.41■□□□□ 0.86
CSNK1D-204ENST00000398519 PRC1O43663 620 aa20.41■□□□□ 0.86
CSNK1D-204ENST00000398519 RAD21O60216 631 aa20.41■□□□□ 0.86
CSNK1D-204ENST00000398519 NDUFB10O96000 172 aa20.41■□□□□ 0.86
CSNK1D-204ENST00000398519 TOP1P11387 765 aaKnown RBP20.41■□□□□ 0.86
CSNK1D-204ENST00000398519 MCM5P33992 734 aa20.41■□□□□ 0.86
CSNK1D-204ENST00000398519 KLRC3Q07444 240 aa20.41■□□□□ 0.86
CSNK1D-204ENST00000398519 ANKS1AQ92625 1134 aa20.41■□□□□ 0.86
CSNK1D-204ENST00000398519 JAKMIP1Q96N16 626 aaKnown RBP20.41■□□□□ 0.86
CSNK1D-204ENST00000398519 SLC45A1Q9Y2W3 748 aa20.41■□□□□ 0.86
CSNK1D-204ENST00000398519 ALDH1A1P00352 501 aa20.4■□□□□ 0.86
CSNK1D-204ENST00000398519 IFIT3O14879 490 aaKnown RBP20.39■□□□□ 0.85
CSNK1D-204ENST00000398519 TRPA1O75762 1119 aa20.39■□□□□ 0.85
CSNK1D-204ENST00000398519 HOXA7P31268 230 aaPredicted RBP20.39■□□□□ 0.85
CSNK1D-204ENST00000398519 IGDCC4Q8TDY8 1250 aa20.39■□□□□ 0.85
CSNK1D-204ENST00000398519 RPAP3Q9H6T3 665 aaPredicted RBP20.39■□□□□ 0.85
CSNK1D-204ENST00000398519 WDR46O15213 610 aaKnown RBP20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 HMGB1P09429 215 aaKnown RBP20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 CYP2C8P10632 490 aa20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 CPA1P15085 419 aa20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 EXOSC10Q01780 885 aaKnown RBP20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 PABPC4Q13310 644 aaKnown RBP eCLIP20.38■□□□□ 0.855e-8■□□□□ 8
CSNK1D-204ENST00000398519 SART3Q15020 963 aaKnown RBP20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 TAF1CQ15572 869 aaPredicted RBP20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 IFIT1BQ5T764 474 aaKnown RBP20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 SLFN13Q68D06 897 aa20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 DHX32Q7L7V1 743 aaKnown RBP20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 RASGRP2Q7LDG7 609 aa20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 NUP88Q99567 741 aaPredicted RBP20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 MTA3Q9BTC8 594 aa20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 BEGAINQ9BUH8 593 aa20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 SENP2Q9HC62 589 aa20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 GPHNQ9NQX3 736 aaPredicted RBP20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 SAGE1Q9NXZ1 904 aa20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 WDR19Q8NEZ3 1342 aa20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 ERICH2A1L162 156 aa20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 CA12O43570 354 aa20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 ANAPC15P60006 121 aa20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 CRHR2Q13324 411 aa20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 TMEM67Q5HYA8 995 aa20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 FAM83BQ5T0W9 1011 aa20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 CATSPERGQ6ZRH7 1159 aa20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 TCEANC2Q96MN5 208 aa20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 CFHR5Q9BXR6 569 aa20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 LRRC2Q9BYS8 371 aa20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 BACH2Q9BYV9 841 aa20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 ASCC2Q9H1I8 757 aaPredicted RBP20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 KAT14Q9H8E8 782 aa20.38■□□□□ 0.85
CSNK1D-204ENST00000398519 USP17L15C9J2P7 530 aa20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 USP17L13C9JLJ4 530 aa20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 USP17L11C9JVI0 530 aa20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 USP17L18D6R9N7 530 aa20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 USP17L22D6RA61 530 aa20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 USP17L17D6RBQ6 530 aa20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 USP17L19D6RCP7 530 aa20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 USP17L20D6RJB6 530 aa20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 SH2B2O14492 632 aaPredicted RBP20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 CASTP20810 708 aaKnown RBP20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 PSMA5P28066 241 aa20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 USP17L24Q0WX57 530 aa20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 WTAPQ15007 396 aa20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 BLOC1S2Q6QNY1 142 aa20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 PNMA1Q8ND90 353 aa20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 CHMP4CQ96CF2 233 aa20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 IL17RAQ96F46 866 aa20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 GMCL1Q96IK5 515 aa20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 TMEM87BQ96K49 555 aa20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 PARK7Q99497 189 aaKnown RBP20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 TANGO6Q9C0B7 1094 aa20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 R3HDMLQ9H3Y0 253 aa20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 LY9Q9HBG7 655 aa20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 PNMA3Q9UL41 463 aa20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 MTMR7Q9Y216 660 aa20.37■□□□□ 0.85
CSNK1D-204ENST00000398519 TBC1D8O95759 1140 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms