RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 PPP4R3BQ5MIZ7 849 aa22.43■■□□□ 1.18
PDLIM2-204ENST00000397760 TMEM179Q6ZVK1 233 aa22.43■■□□□ 1.18
PDLIM2-204ENST00000397760 ZSCAN30Q86W11 494 aa22.43■■□□□ 1.18
PDLIM2-204ENST00000397760 CLEC10AQ8IUN9 316 aa22.43■■□□□ 1.18
PDLIM2-204ENST00000397760 CTCFLQ8NI51 663 aaPredicted RBP22.43■■□□□ 1.18
PDLIM2-204ENST00000397760 RBM28Q9NW13 759 aaKnown RBP22.43■■□□□ 1.18
PDLIM2-204ENST00000397760 CLIP2Q9UDT6 1046 aa22.43■■□□□ 1.18
PDLIM2-204ENST00000397760 ATP6V1DQ9Y5K8 247 aa22.43■■□□□ 1.18
PDLIM2-204ENST00000397760 STX6O43752 255 aa22.42■■□□□ 1.18
PDLIM2-204ENST00000397760 CABP5Q9NP86 173 aa22.42■■□□□ 1.18
PDLIM2-204ENST00000397760 KIF3AQ9Y496 699 aa22.42■■□□□ 1.18
PDLIM2-204ENST00000397760 FDPSP14324 419 aaKnown RBP22.41■■□□□ 1.18
PDLIM2-204ENST00000397760 IFNAR1P17181 557 aa22.41■■□□□ 1.18
PDLIM2-204ENST00000397760 MAP3K14Q99558 947 aa22.41■■□□□ 1.18
PDLIM2-204ENST00000397760 KANSL2Q9H9L4 492 aa22.41■■□□□ 1.18
PDLIM2-204ENST00000397760 ORC3Q9UBD5 711 aaPredicted RBP22.41■■□□□ 1.18
PDLIM2-204ENST00000397760 GH2P01242 217 aa22.41■■□□□ 1.18
PDLIM2-204ENST00000397760 JAG1P78504 1218 aa22.41■■□□□ 1.18
PDLIM2-204ENST00000397760 SEPT2Q15019 361 aa22.41■■□□□ 1.18
PDLIM2-204ENST00000397760 PHKBQ93100 1093 aa22.41■■□□□ 1.18
PDLIM2-204ENST00000397760 PITPNM2Q9BZ72 1349 aa22.4■■□□□ 1.18
PDLIM2-204ENST00000397760 KIF5BP33176 963 aa22.4■■□□□ 1.18
PDLIM2-204ENST00000397760 GUCY1A2P33402 732 aa22.4■■□□□ 1.18
PDLIM2-204ENST00000397760 EPHX2P34913 555 aa22.4■■□□□ 1.18
PDLIM2-204ENST00000397760 ATP2B2Q01814 1243 aa22.4■■□□□ 1.18
PDLIM2-204ENST00000397760 NBPF12Q5TAG4 269 aaPredicted RBP22.4■■□□□ 1.18
PDLIM2-204ENST00000397760 FOXD4L5Q5VV16 416 aaPredicted RBP22.4■■□□□ 1.18
PDLIM2-204ENST00000397760 CMTR1Q8N1G2 835 aaKnown RBP22.4■■□□□ 1.18
PDLIM2-204ENST00000397760 FOXD4L4Q8WXT5 416 aaPredicted RBP22.4■■□□□ 1.18
PDLIM2-204ENST00000397760 RBM27Q9P2N5 1060 aaKnown RBP22.4■■□□□ 1.18
PDLIM2-204ENST00000397760 MTMR7Q9Y216 660 aa22.4■■□□□ 1.18
PDLIM2-204ENST00000397760 ZSCAN22P10073 491 aaPredicted RBP22.39■■□□□ 1.17
PDLIM2-204ENST00000397760 SSRP1Q08945 709 aaKnown RBP22.39■■□□□ 1.17
PDLIM2-204ENST00000397760 USP50Q70EL3 339 aaPredicted RBP22.39■■□□□ 1.17
PDLIM2-204ENST00000397760 CCDC82Q8N4S0 544 aa22.39■■□□□ 1.17
PDLIM2-204ENST00000397760 PPP2R3BQ9Y5P8 575 aa22.39■■□□□ 1.17
PDLIM2-204ENST00000397760 GRM4Q14833 912 aa22.38■■□□□ 1.17
PDLIM2-204ENST00000397760 PRAMEF18Q5VWM3 479 aa22.38■■□□□ 1.17
PDLIM2-204ENST00000397760 LRRC47Q8N1G4 583 aaKnown RBP22.38■■□□□ 1.17
PDLIM2-204ENST00000397760 DCPSQ96C86 337 aaKnown RBP22.38■■□□□ 1.17
PDLIM2-204ENST00000397760 SLC26A6Q9BXS9 759 aa22.38■■□□□ 1.17
PDLIM2-204ENST00000397760 NYAP2Q9P242 653 aa22.38■■□□□ 1.17
PDLIM2-204ENST00000397760 LETM1O95202 739 aaPredicted RBP22.38■■□□□ 1.17
PDLIM2-204ENST00000397760 PLEKHA8P1O95397 391 aa22.38■■□□□ 1.17
PDLIM2-204ENST00000397760 FMNL1O95466 1100 aaPredicted RBP22.38■■□□□ 1.17
PDLIM2-204ENST00000397760 EEF2P13639 858 aaKnown RBP22.38■■□□□ 1.17
PDLIM2-204ENST00000397760 ICA1Q05084 483 aa22.38■■□□□ 1.17
PDLIM2-204ENST00000397760 CSPP1Q1MSJ5 1256 aa22.38■■□□□ 1.17
PDLIM2-204ENST00000397760 TMTC3Q6ZXV5 915 aa22.38■■□□□ 1.17
PDLIM2-204ENST00000397760 MTMR6Q9Y217 621 aa22.38■■□□□ 1.17
PDLIM2-204ENST00000397760 MYH8P13535 1937 aa22.37■■□□□ 1.17
PDLIM2-204ENST00000397760 SYCE3A1L190 88 aa22.37■■□□□ 1.17
PDLIM2-204ENST00000397760 VPS37CA5D8V6 355 aaPredicted RBP22.37■■□□□ 1.17
PDLIM2-204ENST00000397760 IQCA1LA6NCM1 817 aa22.37■■□□□ 1.17
PDLIM2-204ENST00000397760 CAP2P40123 477 aa22.37■■□□□ 1.17
PDLIM2-204ENST00000397760 NBPF11Q86T75 865 aa22.37■■□□□ 1.17
PDLIM2-204ENST00000397760 TRIM22Q8IYM9 498 aa22.37■■□□□ 1.17
PDLIM2-204ENST00000397760 HOOK2Q96ED9 719 aa22.37■■□□□ 1.17
PDLIM2-204ENST00000397760 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.37■■□□□ 1.17
PDLIM2-204ENST00000397760 PHF20L1A8MW92 1017 aa22.36■■□□□ 1.17
PDLIM2-204ENST00000397760 DCAF15Q66K64 600 aa22.36■■□□□ 1.17
PDLIM2-204ENST00000397760 SIAH1Q8IUQ4 282 aa22.36■■□□□ 1.17
PDLIM2-204ENST00000397760 MKL1Q969V6 931 aa22.36■■□□□ 1.17
PDLIM2-204ENST00000397760 MAD2L2Q9UI95 211 aa22.36■■□□□ 1.17
PDLIM2-204ENST00000397760 ZBTB21Q9ULJ3 1066 aa22.36■■□□□ 1.17
PDLIM2-204ENST00000397760 STK36Q9NRP7 1315 aa22.36■■□□□ 1.17
PDLIM2-204ENST00000397760 FUT2Q10981 343 aa22.36■■□□□ 1.17
PDLIM2-204ENST00000397760 STAG2Q8N3U4 1231 aa22.36■■□□□ 1.17
PDLIM2-204ENST00000397760 SRBD1Q8N5C6 995 aaKnown RBP22.36■■□□□ 1.17
PDLIM2-204ENST00000397760 TAF1DQ9H5J8 278 aaPredicted RBP22.36■■□□□ 1.17
PDLIM2-204ENST00000397760 GREB1LQ9C091 1923 aaPredicted RBP22.35■■□□□ 1.17
PDLIM2-204ENST00000397760 H3BQV1 296 aa22.35■■□□□ 1.17
PDLIM2-204ENST00000397760 GNAQP50148 359 aa22.35■■□□□ 1.17
PDLIM2-204ENST00000397760 FOSBP53539 338 aa22.35■■□□□ 1.17
PDLIM2-204ENST00000397760 IFFO2Q5TF58 517 aa22.35■■□□□ 1.17
PDLIM2-204ENST00000397760 USP48Q86UV5 1035 aa22.35■■□□□ 1.17
PDLIM2-204ENST00000397760 SULF1Q8IWU6 871 aa22.35■■□□□ 1.17
PDLIM2-204ENST00000397760 TSPY26PQ9H489 355 aa22.35■■□□□ 1.17
PDLIM2-204ENST00000397760 PALM3A6NDB9 673 aaPredicted RBP22.34■■□□□ 1.17
PDLIM2-204ENST00000397760 DCAF8L1A6NGE4 600 aa22.34■■□□□ 1.17
PDLIM2-204ENST00000397760 USP17L5A8MUK1 530 aa22.34■■□□□ 1.17
PDLIM2-204ENST00000397760 POTECB2RU33 542 aa22.34■■□□□ 1.17
PDLIM2-204ENST00000397760 PARP1P09874 1014 aaKnown RBP22.34■■□□□ 1.17
PDLIM2-204ENST00000397760 USP17L2Q6R6M4 530 aa22.34■■□□□ 1.17
PDLIM2-204ENST00000397760 CDC37L1Q7L3B6 337 aa22.34■■□□□ 1.17
PDLIM2-204ENST00000397760 RASGRP2Q7LDG7 609 aa22.34■■□□□ 1.17
PDLIM2-204ENST00000397760 ZC3H15Q8WU90 426 aaKnown RBP22.34■■□□□ 1.17
PDLIM2-204ENST00000397760 ALG1Q9BT22 464 aa22.34■■□□□ 1.17
PDLIM2-204ENST00000397760 RNF26Q9BY78 433 aaPredicted RBP22.34■■□□□ 1.17
PDLIM2-204ENST00000397760 PDHBP11177 359 aa22.34■■□□□ 1.17
PDLIM2-204ENST00000397760 MSNP26038 577 aaKnown RBP22.34■■□□□ 1.17
PDLIM2-204ENST00000397760 AKAP17AQ02040 695 aaKnown RBP22.34■■□□□ 1.17
PDLIM2-204ENST00000397760 SUPT20HL1Q3ZLR7 823 aa22.34■■□□□ 1.17
PDLIM2-204ENST00000397760 C8orf76Q96K31 380 aa22.34■■□□□ 1.17
PDLIM2-204ENST00000397760 ZNF341Q9BYN7 854 aa22.34■■□□□ 1.17
PDLIM2-204ENST00000397760 NOL7Q9UMY1 257 aaKnown RBP22.34■■□□□ 1.17
PDLIM2-204ENST00000397760 UBE2Q2LH0YL09 131 aa22.33■■□□□ 1.16
PDLIM2-204ENST00000397760 PRPF3O43395 683 aaKnown RBP22.33■■□□□ 1.16
PDLIM2-204ENST00000397760 F13A1P00488 732 aa22.33■■□□□ 1.16
PDLIM2-204ENST00000397760 GOLGA8HP0CJ92 632 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms