RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 FBXL16Q8N461 479 aa27.67■■■□□ 2.02
TSPAN4-203ENST00000397397 AGXT2Q9BYV1 514 aa27.67■■■□□ 2.02
TSPAN4-203ENST00000397397 TMX2Q9Y320 296 aa27.67■■■□□ 2.02
TSPAN4-203ENST00000397397 IRF6O14896 467 aa27.66■■■□□ 2.02
TSPAN4-203ENST00000397397 AK2P54819 239 aa27.66■■■□□ 2.02
TSPAN4-203ENST00000397397 MTMR2Q13614 643 aa27.66■■■□□ 2.02
TSPAN4-203ENST00000397397 ZYXQ15942 572 aaKnown RBP27.66■■■□□ 2.02
TSPAN4-203ENST00000397397 HHIPL1Q96JK4 782 aa27.66■■■□□ 2.02
TSPAN4-203ENST00000397397 CYP4F22Q6NT55 531 aa27.65■■■□□ 2.02
TSPAN4-203ENST00000397397 RASAL3Q86YV0 1011 aa27.65■■■□□ 2.02
TSPAN4-203ENST00000397397 PNMA1Q8ND90 353 aa27.65■■■□□ 2.02
TSPAN4-203ENST00000397397 KIAA1683Q9H0B3 1180 aa27.65■■■□□ 2.02
TSPAN4-203ENST00000397397 SYNPO2Q9UMS6 1093 aa27.65■■■□□ 2.02
TSPAN4-203ENST00000397397 RAD21O60216 631 aa27.64■■■□□ 2.02
TSPAN4-203ENST00000397397 ST18O60284 1047 aa27.64■■■□□ 2.02
TSPAN4-203ENST00000397397 BACE1P56817 501 aa27.64■■■□□ 2.02
TSPAN4-203ENST00000397397 APOBRQ0VD83 1088 aa27.64■■■□□ 2.02
TSPAN4-203ENST00000397397 MKRN3Q13064 507 aaKnown RBP27.64■■■□□ 2.02
TSPAN4-203ENST00000397397 ANKRD1Q15327 319 aa27.64■■■□□ 2.02
TSPAN4-203ENST00000397397 SPRYD7Q5W111 196 aa27.64■■■□□ 2.02
TSPAN4-203ENST00000397397 PAXIP1Q6ZW49 1069 aaPredicted RBP27.64■■■□□ 2.02
TSPAN4-203ENST00000397397 SGMS1Q86VZ5 419 aa27.64■■■□□ 2.02
TSPAN4-203ENST00000397397 IL27Q8NEV9 243 aa27.64■■■□□ 2.02
TSPAN4-203ENST00000397397 GOPCQ9HD26 462 aa27.64■■■□□ 2.02
TSPAN4-203ENST00000397397 MTMR7Q9Y216 660 aa27.64■■■□□ 2.02
TSPAN4-203ENST00000397397 WDR33Q9C0J8 1336 aaKnown RBP27.64■■■□□ 2.01
TSPAN4-203ENST00000397397 CXCL11O14625 94 aa27.63■■■□□ 2.01
TSPAN4-203ENST00000397397 NOL8Q76FK4 1167 aaKnown RBP27.63■■■□□ 2.01
TSPAN4-203ENST00000397397 CATIPQ7Z7H3 387 aa27.63■■■□□ 2.01
TSPAN4-203ENST00000397397 LARP6Q9BRS8 491 aaKnown RBP27.63■■■□□ 2.01
TSPAN4-203ENST00000397397 NAP1L2Q9ULW6 460 aaPredicted RBP27.63■■■□□ 2.01
TSPAN4-203ENST00000397397 KCNH4Q9UQ05 1017 aa27.63■■■□□ 2.01
TSPAN4-203ENST00000397397 KLF18A0A0U1RQI7 1052 aa27.62■■■□□ 2.01
TSPAN4-203ENST00000397397 C19orf81C9J6K1 198 aa27.62■■■□□ 2.01
TSPAN4-203ENST00000397397 ZBTB48P10074 688 aaPredicted RBP27.62■■■□□ 2.01
TSPAN4-203ENST00000397397 USP14P54578 494 aa27.62■■■□□ 2.01
TSPAN4-203ENST00000397397 USP17L2Q6R6M4 530 aa27.62■■■□□ 2.01
TSPAN4-203ENST00000397397 SYNE3Q6ZMZ3 975 aa27.62■■■□□ 2.01
TSPAN4-203ENST00000397397 ZNF654Q8IZM8 581 aa27.62■■■□□ 2.01
TSPAN4-203ENST00000397397 CAPNS2Q96L46 248 aa27.62■■■□□ 2.01
TSPAN4-203ENST00000397397 VCPKMTQ9H867 229 aa27.62■■■□□ 2.01
TSPAN4-203ENST00000397397 BRPF3Q9ULD4 1205 aa27.62■■■□□ 2.01
TSPAN4-203ENST00000397397 SLC12A7Q9Y666 1083 aa27.62■■■□□ 2.01
TSPAN4-203ENST00000397397 PTPRFP10586 1907 aa27.62■■■□□ 2.01
TSPAN4-203ENST00000397397 F5H6K3 240 aa27.61■■■□□ 2.01
TSPAN4-203ENST00000397397 SLC10A3P09131 477 aa27.61■■■□□ 2.01
TSPAN4-203ENST00000397397 HMGCS2P54868 508 aa27.61■■■□□ 2.01
TSPAN4-203ENST00000397397 KLRC3Q07444 240 aa27.61■■■□□ 2.01
TSPAN4-203ENST00000397397 GRM1Q13255 1194 aa27.61■■■□□ 2.01
TSPAN4-203ENST00000397397 SLFN13Q68D06 897 aa27.61■■■□□ 2.01
TSPAN4-203ENST00000397397 GMCL1P1Q8NEA9 526 aa27.61■■■□□ 2.01
TSPAN4-203ENST00000397397 CCDC102AQ96A19 550 aa27.61■■■□□ 2.01
TSPAN4-203ENST00000397397 CHMP4CQ96CF2 233 aa27.61■■■□□ 2.01
TSPAN4-203ENST00000397397 SNAPC2Q13487 334 aa27.6■■■□□ 2.01
TSPAN4-203ENST00000397397 DGKZQ13574 1117 aa27.6■■■□□ 2.01
TSPAN4-203ENST00000397397 EMILIN3Q9NT22 766 aa27.6■■■□□ 2.01
TSPAN4-203ENST00000397397 TMOD4Q9NZQ9 345 aa27.6■■■□□ 2.01
TSPAN4-203ENST00000397397 PCNTO95613 3336 aa27.6■■■□□ 2.01
TSPAN4-203ENST00000397397 A0A0G2JLL6 359 aaPredicted RBP27.59■■■□□ 2.01
TSPAN4-203ENST00000397397 NDUFB10O96000 172 aa27.59■■■□□ 2.01
TSPAN4-203ENST00000397397 HSPA1AP0DMV8 641 aaKnown RBP27.59■■■□□ 2.01
TSPAN4-203ENST00000397397 HSPA1BP0DMV9 641 aaKnown RBP27.59■■■□□ 2.01
TSPAN4-203ENST00000397397 SH3D19Q5HYK7 790 aa27.59■■■□□ 2.01
TSPAN4-203ENST00000397397 KIAA1755Q5JYT7 1200 aa27.59■■■□□ 2.01
TSPAN4-203ENST00000397397 APOA5Q6Q788 366 aa27.59■■■□□ 2.01
TSPAN4-203ENST00000397397 PRRT2Q7Z6L0 340 aaPredicted RBP27.59■■■□□ 2.01
TSPAN4-203ENST00000397397 RAB11FIP4Q86YS3 637 aa27.59■■■□□ 2.01
TSPAN4-203ENST00000397397 SPICE1Q8N0Z3 855 aa27.59■■■□□ 2.01
TSPAN4-203ENST00000397397 NUP133Q8WUM0 1156 aa27.59■■■□□ 2.01
TSPAN4-203ENST00000397397 MYL10Q9BUA6 226 aa27.59■■■□□ 2.01
TSPAN4-203ENST00000397397 DDAH1O94760 285 aa27.58■■■□□ 2.01
TSPAN4-203ENST00000397397 ZBTB43O43298 467 aa27.58■■■□□ 2
TSPAN4-203ENST00000397397 GTF2A2P52657 109 aa27.58■■■□□ 2
TSPAN4-203ENST00000397397 EVCP57679 992 aa27.58■■■□□ 2
TSPAN4-203ENST00000397397 GADL1Q6ZQY3 521 aa27.58■■■□□ 2
TSPAN4-203ENST00000397397 DCAF4Q8WV16 495 aa27.58■■■□□ 2
TSPAN4-203ENST00000397397 C12orf42Q96LP6 360 aa27.58■■■□□ 2
TSPAN4-203ENST00000397397 TPCN1Q9ULQ1 816 aa27.58■■■□□ 2
TSPAN4-203ENST00000397397 GOLGA8BA8MQT2 603 aa27.57■■■□□ 2
TSPAN4-203ENST00000397397 FAM155AB1AL88 458 aaPredicted RBP27.57■■■□□ 2
TSPAN4-203ENST00000397397 CALM1P0DP23 149 aa27.57■■■□□ 2
TSPAN4-203ENST00000397397 CALM2P0DP24 149 aa27.57■■■□□ 2
TSPAN4-203ENST00000397397 CALM3P0DP25 149 aa27.57■■■□□ 2
TSPAN4-203ENST00000397397 RXRAP19793 462 aa27.57■■■□□ 2
TSPAN4-203ENST00000397397 TROAPQ12815 778 aa27.57■■■□□ 2
TSPAN4-203ENST00000397397 RASGRP2Q7LDG7 609 aa27.57■■■□□ 2
TSPAN4-203ENST00000397397 MICU3Q86XE3 530 aa27.57■■■□□ 2
TSPAN4-203ENST00000397397 LPAR1Q92633 364 aa27.57■■■□□ 2
TSPAN4-203ENST00000397397 THSD7BQ9C0I4 1608 aa27.56■■■□□ 2
TSPAN4-203ENST00000397397 LOC285556D6RIA3 1793 aa27.56■■■□□ 2
TSPAN4-203ENST00000397397 AOC2O75106 756 aa27.56■■■□□ 2
TSPAN4-203ENST00000397397 CD2BP2O95400 341 aaKnown RBP27.56■■■□□ 2
TSPAN4-203ENST00000397397 PDHBP11177 359 aa27.56■■■□□ 2
TSPAN4-203ENST00000397397 SLC1A4P43007 532 aa27.56■■■□□ 2
TSPAN4-203ENST00000397397 GMCL1Q96IK5 515 aa27.56■■■□□ 2
TSPAN4-203ENST00000397397 ISY1Q9ULR0 285 aaKnown RBP27.56■■■□□ 2
TSPAN4-203ENST00000397397 LIMCH1Q9UPQ0 1083 aa27.56■■■□□ 2
TSPAN4-203ENST00000397397 CETPP11597 493 aa27.55■■■□□ 2
TSPAN4-203ENST00000397397 PDIA3P30101 505 aaKnown RBP27.55■■■□□ 2
TSPAN4-203ENST00000397397 CCDC96Q2M329 555 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms