RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 JAG1P78504 1218 aa27.47■■□□□ 1.99
TSPAN4-202ENST00000397396 NECAB1Q8N987 351 aa27.47■■□□□ 1.99
TSPAN4-202ENST00000397396 GMCL1P1Q8NEA9 526 aa27.47■■□□□ 1.99
TSPAN4-202ENST00000397396 MYL10Q9BUA6 226 aa27.47■■□□□ 1.99
TSPAN4-202ENST00000397396 PAPPA2Q9BXP8 1791 aa27.47■■□□□ 1.99
TSPAN4-202ENST00000397396 PRKG1Q13976 671 aa27.46■■□□□ 1.99
TSPAN4-202ENST00000397396 SHROOM1Q2M3G4 852 aaPredicted RBP27.46■■□□□ 1.99
TSPAN4-202ENST00000397396 CLEC10AQ8IUN9 316 aa27.46■■□□□ 1.99
TSPAN4-202ENST00000397396 LRRC47Q8N1G4 583 aaKnown RBP27.46■■□□□ 1.99
TSPAN4-202ENST00000397396 GOPCQ9HD26 462 aa27.46■■□□□ 1.99
TSPAN4-202ENST00000397396 TMX2Q9Y320 296 aa27.46■■□□□ 1.99
TSPAN4-202ENST00000397396 KIF3AQ9Y496 699 aa27.46■■□□□ 1.99
TSPAN4-202ENST00000397396 MYH4Q9Y623 1939 aa27.46■■□□□ 1.99
TSPAN4-202ENST00000397396 GRM4Q14833 912 aa27.45■■□□□ 1.99
TSPAN4-202ENST00000397396 LZTS2Q9BRK4 669 aa27.45■■□□□ 1.99
TSPAN4-202ENST00000397396 CWC22Q9HCG8 908 aaKnown RBP27.45■■□□□ 1.99
TSPAN4-202ENST00000397396 HMGN5P82970 282 aaKnown RBP27.44■■□□□ 1.98
TSPAN4-202ENST00000397396 ASPRV1Q53RT3 343 aa27.44■■□□□ 1.98
TSPAN4-202ENST00000397396 DCAF4Q8WV16 495 aa27.44■■□□□ 1.98
TSPAN4-202ENST00000397396 ZKSCAN4Q969J2 545 aaPredicted RBP27.44■■□□□ 1.98
TSPAN4-202ENST00000397396 WDR18Q9BV38 432 aa27.44■■□□□ 1.98
TSPAN4-202ENST00000397396 SMC3Q9UQE7 1217 aa27.44■■□□□ 1.98
TSPAN4-202ENST00000397396 TRAF5O00463 557 aa27.43■■□□□ 1.98
TSPAN4-202ENST00000397396 PARP1P09874 1014 aaKnown RBP27.43■■□□□ 1.98
TSPAN4-202ENST00000397396 SNHG28P0DPA3 235 aa27.43■■□□□ 1.98
TSPAN4-202ENST00000397396 PTPRAP18433 802 aa27.43■■□□□ 1.98
TSPAN4-202ENST00000397396 RXRAP19793 462 aa27.43■■□□□ 1.98
TSPAN4-202ENST00000397396 SLC4A3P48751 1232 aa27.43■■□□□ 1.98
TSPAN4-202ENST00000397396 USP14P54578 494 aa27.43■■□□□ 1.98
TSPAN4-202ENST00000397396 VGLL4Q14135 290 aa27.43■■□□□ 1.98
TSPAN4-202ENST00000397396 GPATCH4Q5T3I0 446 aaKnown RBP27.43■■□□□ 1.98
TSPAN4-202ENST00000397396 DLK2Q6UY11 383 aa27.43■■□□□ 1.98
TSPAN4-202ENST00000397396 SIAH1Q8IUQ4 282 aa27.43■■□□□ 1.98
TSPAN4-202ENST00000397396 FEZ1Q99689 392 aa27.43■■□□□ 1.98
TSPAN4-202ENST00000397396 PDHBP11177 359 aa27.42■■□□□ 1.98
TSPAN4-202ENST00000397396 ST3GAL1Q11201 340 aa27.42■■□□□ 1.98
TSPAN4-202ENST00000397396 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.42■■□□□ 1.98
TSPAN4-202ENST00000397396 RAB11FIP4Q86YS3 637 aa27.42■■□□□ 1.98
TSPAN4-202ENST00000397396 CCDC144CPQ8IYA2 1237 aa27.42■■□□□ 1.98
TSPAN4-202ENST00000397396 C2orf69Q8N8R5 385 aa27.42■■□□□ 1.98
TSPAN4-202ENST00000397396 SMC1BQ8NDV3 1235 aa27.42■■□□□ 1.98
TSPAN4-202ENST00000397396 GMCL1Q96IK5 515 aa27.42■■□□□ 1.98
TSPAN4-202ENST00000397396 ZNF408Q9H9D4 720 aa27.42■■□□□ 1.98
TSPAN4-202ENST00000397396 NCOA5Q9HCD5 579 aaKnown RBP27.42■■□□□ 1.98
TSPAN4-202ENST00000397396 SLFN13Q68D06 897 aa27.41■■□□□ 1.98
TSPAN4-202ENST00000397396 KIAA1683Q9H0B3 1180 aa27.41■■□□□ 1.98
TSPAN4-202ENST00000397396 VCPKMTQ9H867 229 aa27.41■■□□□ 1.98
TSPAN4-202ENST00000397396 GBA2Q9HCG7 927 aaPredicted RBP27.41■■□□□ 1.98
TSPAN4-202ENST00000397396 SNCAIPQ9Y6H5 919 aa27.41■■□□□ 1.98
TSPAN4-202ENST00000397396 OTOFQ9HC10 1997 aa27.41■■□□□ 1.98
TSPAN4-202ENST00000397396 KIF3CO14782 793 aa27.41■■□□□ 1.98
TSPAN4-202ENST00000397396 IFNAR1P17181 557 aa27.41■■□□□ 1.98
TSPAN4-202ENST00000397396 CDC27P30260 824 aa27.41■■□□□ 1.98
TSPAN4-202ENST00000397396 TMTC3Q6ZXV5 915 aa27.41■■□□□ 1.98
TSPAN4-202ENST00000397396 TRIM22Q8IYM9 498 aa27.41■■□□□ 1.98
TSPAN4-202ENST00000397396 ZNF280CQ8ND82 737 aa27.41■■□□□ 1.98
TSPAN4-202ENST00000397396 NSUN7Q8NE18 718 aaKnown RBP27.41■■□□□ 1.98
TSPAN4-202ENST00000397396 LPAR1Q92633 364 aa27.41■■□□□ 1.98
TSPAN4-202ENST00000397396 FAM217BQ9NTX9 383 aaPredicted RBP27.41■■□□□ 1.98
TSPAN4-202ENST00000397396 RBM27Q9P2N5 1060 aaKnown RBP27.41■■□□□ 1.98
TSPAN4-202ENST00000397396 FZD1Q9UP38 647 aa27.41■■□□□ 1.98
TSPAN4-202ENST00000397396 STK36Q9NRP7 1315 aa27.4■■□□□ 1.98
TSPAN4-202ENST00000397396 USP17L10C9JJH3 530 aa27.4■■□□□ 1.98
TSPAN4-202ENST00000397396 F5H6K3 240 aa27.4■■□□□ 1.98
TSPAN4-202ENST00000397396 CELF2O95319 508 aaKnown RBP27.4■■□□□ 1.98
TSPAN4-202ENST00000397396 ITGBL1O95965 494 aaPredicted RBP27.4■■□□□ 1.98
TSPAN4-202ENST00000397396 PDIA4P13667 645 aaKnown RBP27.4■■□□□ 1.98
TSPAN4-202ENST00000397396 YY1P25490 414 aa27.4■■□□□ 1.98
TSPAN4-202ENST00000397396 SMARCA1P28370 1054 aa27.4■■□□□ 1.98
TSPAN4-202ENST00000397396 ADD1P35611 737 aaKnown RBP27.4■■□□□ 1.98
TSPAN4-202ENST00000397396 SLC1A4P43007 532 aa27.4■■□□□ 1.98
TSPAN4-202ENST00000397396 KLRC3Q07444 240 aa27.4■■□□□ 1.98
TSPAN4-202ENST00000397396 ERO1BQ86YB8 467 aa27.4■■□□□ 1.98
TSPAN4-202ENST00000397396 SMARCC2Q8TAQ2 1214 aa27.4■■□□□ 1.98
TSPAN4-202ENST00000397396 RBM46Q8TBY0 533 aaKnown RBP27.4■■□□□ 1.98
TSPAN4-202ENST00000397396 MTMR7Q9Y216 660 aa27.4■■□□□ 1.98
TSPAN4-202ENST00000397396 A0A1W2PRG0 241 aa27.39■■□□□ 1.97
TSPAN4-202ENST00000397396 PTPDC1A2A3K4 754 aa27.39■■□□□ 1.97
TSPAN4-202ENST00000397396 PALM3A6NDB9 673 aaPredicted RBP27.39■■□□□ 1.97
TSPAN4-202ENST00000397396 C19orf81C9J6K1 198 aa27.39■■□□□ 1.97
TSPAN4-202ENST00000397396 NDUFB10O96000 172 aa27.39■■□□□ 1.97
TSPAN4-202ENST00000397396 ECE1P42892 770 aa27.39■■□□□ 1.97
TSPAN4-202ENST00000397396 PPATQ06203 517 aa27.39■■□□□ 1.97
TSPAN4-202ENST00000397396 ZNF543Q08ER8 600 aa27.39■■□□□ 1.97
TSPAN4-202ENST00000397396 CCDC96Q2M329 555 aa27.39■■□□□ 1.97
TSPAN4-202ENST00000397396 LDLRAD1Q5T700 205 aa27.39■■□□□ 1.97
TSPAN4-202ENST00000397396 ACER1Q8TDN7 264 aa27.39■■□□□ 1.97
TSPAN4-202ENST00000397396 MAD2L2Q9UI95 211 aa27.39■■□□□ 1.97
TSPAN4-202ENST00000397396 RAD21O60216 631 aa27.38■■□□□ 1.97
TSPAN4-202ENST00000397396 FAM184AQ8NB25 1140 aa27.38■■□□□ 1.97
TSPAN4-202ENST00000397396 SPRYD3Q8NCJ5 442 aa27.38■■□□□ 1.97
TSPAN4-202ENST00000397396 RNF26Q9BY78 433 aaPredicted RBP27.38■■□□□ 1.97
TSPAN4-202ENST00000397396 FOXD4L1Q9NU39 408 aa27.38■■□□□ 1.97
TSPAN4-202ENST00000397396 ZHX2Q9Y6X8 837 aa27.38■■□□□ 1.97
TSPAN4-202ENST00000397396 SPDYE5A6NIY4 337 aa27.37■■□□□ 1.97
TSPAN4-202ENST00000397396 PDCP20941 246 aa27.37■■□□□ 1.97
TSPAN4-202ENST00000397396 AKAP17AQ02040 695 aaKnown RBP27.37■■□□□ 1.97
TSPAN4-202ENST00000397396 SSRP1Q08945 709 aaKnown RBP27.37■■□□□ 1.97
TSPAN4-202ENST00000397396 NTRK3Q16288 839 aa27.37■■□□□ 1.97
TSPAN4-202ENST00000397396 WASF1Q92558 559 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms