RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 IFIT1BQ5T764 474 aaKnown RBP17.36■□□□□ 0.37
CAPN3-207ENST00000397200 DGKHQ86XP1 1220 aa17.36■□□□□ 0.37
CAPN3-207ENST00000397200 SCYL3Q8IZE3 742 aa17.36■□□□□ 0.37
CAPN3-207ENST00000397200 ZKSCAN4Q969J2 545 aaPredicted RBP17.36■□□□□ 0.37
CAPN3-207ENST00000397200 KANSL2Q9H9L4 492 aa17.36■□□□□ 0.37
CAPN3-207ENST00000397200 GPHNQ9NQX3 736 aaPredicted RBP17.36■□□□□ 0.37
CAPN3-207ENST00000397200 MTMR4Q9NYA4 1195 aa17.36■□□□□ 0.37
CAPN3-207ENST00000397200 STX8Q9UNK0 236 aa17.36■□□□□ 0.37
CAPN3-207ENST00000397200 MYH4Q9Y623 1939 aa17.35■□□□□ 0.37
CAPN3-207ENST00000397200 GUCY1A2P33402 732 aa17.35■□□□□ 0.37
CAPN3-207ENST00000397200 ICA1Q05084 483 aa17.35■□□□□ 0.37
CAPN3-207ENST00000397200 SEC23AQ15436 765 aa17.35■□□□□ 0.37
CAPN3-207ENST00000397200 MAP3K11Q16584 847 aa17.35■□□□□ 0.37
CAPN3-207ENST00000397200 TMTC2Q8N394 836 aa17.35■□□□□ 0.37
CAPN3-207ENST00000397200 LY9Q9HBG7 655 aa17.35■□□□□ 0.37
CAPN3-207ENST00000397200 GBA2Q9HCG7 927 aaPredicted RBP17.35■□□□□ 0.37
CAPN3-207ENST00000397200 PICK1Q9NRD5 415 aa17.35■□□□□ 0.37
CAPN3-207ENST00000397200 BRPF3Q9ULD4 1205 aa17.35■□□□□ 0.37
CAPN3-207ENST00000397200 CSADQ9Y600 493 aa17.35■□□□□ 0.37
CAPN3-207ENST00000397200 TTLL1O95922 423 aa17.34■□□□□ 0.37
CAPN3-207ENST00000397200 LIFRP42702 1097 aa17.34■□□□□ 0.37
CAPN3-207ENST00000397200 FKBP1BP68106 108 aa17.34■□□□□ 0.37
CAPN3-207ENST00000397200 SCRN1Q12765 414 aa17.34■□□□□ 0.37
CAPN3-207ENST00000397200 NOL9Q5SY16 702 aaKnown RBP17.34■□□□□ 0.37
CAPN3-207ENST00000397200 LARP1BQ659C4 914 aaKnown RBP17.34■□□□□ 0.37
CAPN3-207ENST00000397200 NFXL1Q6ZNB6 911 aa17.34■□□□□ 0.37
CAPN3-207ENST00000397200 MOB2Q70IA6 237 aa17.34■□□□□ 0.37
CAPN3-207ENST00000397200 CLEC10AQ8IUN9 316 aa17.34■□□□□ 0.37
CAPN3-207ENST00000397200 C2orf69Q8N8R5 385 aa17.34■□□□□ 0.37
CAPN3-207ENST00000397200 ZNF274Q96GC6 653 aaPredicted RBP17.34■□□□□ 0.37
CAPN3-207ENST00000397200 TMEM63CQ9P1W3 806 aa17.34■□□□□ 0.37
CAPN3-207ENST00000397200 CCDC69A6NI79 296 aa17.33■□□□□ 0.37
CAPN3-207ENST00000397200 ATP2B2Q01814 1243 aa17.33■□□□□ 0.37
CAPN3-207ENST00000397200 VGLL4Q14135 290 aa17.33■□□□□ 0.37
CAPN3-207ENST00000397200 RCSD1Q6JBY9 416 aa17.33■□□□□ 0.37
CAPN3-207ENST00000397200 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.33■□□□□ 0.37
CAPN3-207ENST00000397200 ANKRD13AQ8IZ07 590 aa17.33■□□□□ 0.37
CAPN3-207ENST00000397200 ANKS1AQ92625 1134 aa17.33■□□□□ 0.37
CAPN3-207ENST00000397200 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.33■□□□□ 0.37
CAPN3-207ENST00000397200 CNPY2Q9Y2B0 182 aa17.33■□□□□ 0.37
CAPN3-207ENST00000397200 NOVP48745 357 aa17.32■□□□□ 0.36
CAPN3-207ENST00000397200 APOBRQ0VD83 1088 aa17.32■□□□□ 0.36
CAPN3-207ENST00000397200 STK3Q13188 491 aa17.32■□□□□ 0.36
CAPN3-207ENST00000397200 SGMS1Q86VZ5 419 aa17.32■□□□□ 0.36
CAPN3-207ENST00000397200 NSUN7Q8NE18 718 aaKnown RBP17.32■□□□□ 0.36
CAPN3-207ENST00000397200 KAT14Q9H8E8 782 aa17.32■□□□□ 0.36
CAPN3-207ENST00000397200 SENP2Q9HC62 589 aa17.32■□□□□ 0.36
CAPN3-207ENST00000397200 NYAP2Q9P242 653 aa17.32■□□□□ 0.36
CAPN3-207ENST00000397200 CLIP2Q9UDT6 1046 aa17.32■□□□□ 0.36
CAPN3-207ENST00000397200 PASKQ96RG2 1323 aa17.32■□□□□ 0.36
CAPN3-207ENST00000397200 VPS37CA5D8V6 355 aaPredicted RBP17.32■□□□□ 0.36
CAPN3-207ENST00000397200 USP17L5A8MUK1 530 aa17.32■□□□□ 0.36
CAPN3-207ENST00000397200 UBE2Q2LH0YL09 131 aa17.32■□□□□ 0.36
CAPN3-207ENST00000397200 JAK2O60674 1132 aa17.32■□□□□ 0.36
CAPN3-207ENST00000397200 TOP1P11387 765 aaKnown RBP17.32■□□□□ 0.36
CAPN3-207ENST00000397200 EEF2P13639 858 aaKnown RBP17.32■□□□□ 0.36
CAPN3-207ENST00000397200 CSPP1Q1MSJ5 1256 aa17.32■□□□□ 0.36
CAPN3-207ENST00000397200 CHMP4CQ96CF2 233 aa17.32■□□□□ 0.36
CAPN3-207ENST00000397200 TMEM47Q9BQJ4 181 aa17.32■□□□□ 0.36
CAPN3-207ENST00000397200 ARHGEF10LQ9HCE6 1279 aa17.32■□□□□ 0.36
CAPN3-207ENST00000397200 RBM27Q9P2N5 1060 aaKnown RBP17.32■□□□□ 0.36
CAPN3-207ENST00000397200 NAP1L2Q9ULW6 460 aaPredicted RBP17.32■□□□□ 0.36
CAPN3-207ENST00000397200 SNCAIPQ9Y6H5 919 aa17.32■□□□□ 0.36
CAPN3-207ENST00000397200 KLF18A0A0U1RQI7 1052 aa17.31■□□□□ 0.36
CAPN3-207ENST00000397200 UNCXA6NJT0 531 aa17.31■□□□□ 0.36
CAPN3-207ENST00000397200 GADD45BO75293 160 aaPredicted RBP17.31■□□□□ 0.36
CAPN3-207ENST00000397200 PTPRAP18433 802 aa17.31■□□□□ 0.36
CAPN3-207ENST00000397200 NCLP19338 710 aaKnown RBP17.31■□□□□ 0.36
CAPN3-207ENST00000397200 HMGN5P82970 282 aaKnown RBP17.31■□□□□ 0.36
CAPN3-207ENST00000397200 FSTL1Q12841 308 aa17.31■□□□□ 0.36
CAPN3-207ENST00000397200 CST9Q5W186 159 aa17.31■□□□□ 0.36
CAPN3-207ENST00000397200 SYNE3Q6ZMZ3 975 aa17.31■□□□□ 0.36
CAPN3-207ENST00000397200 CCDC84Q86UT8 332 aaPredicted RBP17.31■□□□□ 0.36
CAPN3-207ENST00000397200 AS3MTQ9HBK9 375 aa17.31■□□□□ 0.36
CAPN3-207ENST00000397200 GDPD2Q9HCC8 539 aa17.31■□□□□ 0.36
CAPN3-207ENST00000397200 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.31■□□□□ 0.36
CAPN3-207ENST00000397200 SLC12A7Q9Y666 1083 aa17.31■□□□□ 0.36
CAPN3-207ENST00000397200 PHIPQ8WWQ0 1821 aa17.31■□□□□ 0.36
CAPN3-207ENST00000397200 ELP1O95163 1332 aa17.3■□□□□ 0.36
CAPN3-207ENST00000397200 CTDNEP1O95476 244 aa17.3■□□□□ 0.36
CAPN3-207ENST00000397200 PDIA3P30101 505 aaKnown RBP17.3■□□□□ 0.36
CAPN3-207ENST00000397200 UBE2HP62256 183 aa17.3■□□□□ 0.36
CAPN3-207ENST00000397200 LDLRAD1Q5T700 205 aa17.3■□□□□ 0.36
CAPN3-207ENST00000397200 CATIPQ7Z7H3 387 aa17.3■□□□□ 0.36
CAPN3-207ENST00000397200 PNMA1Q8ND90 353 aa17.3■□□□□ 0.36
CAPN3-207ENST00000397200 PANK2Q9BZ23 570 aa17.3■□□□□ 0.36
CAPN3-207ENST00000397200 SH2D4AQ9H788 454 aa17.3■□□□□ 0.36
CAPN3-207ENST00000397200 ELP3Q9H9T3 547 aa17.3■□□□□ 0.36
CAPN3-207ENST00000397200 DNM1Q05193 864 aaKnown RBP17.29■□□□□ 0.36
CAPN3-207ENST00000397200 APOA5Q6Q788 366 aa17.29■□□□□ 0.36
CAPN3-207ENST00000397200 SIAH1Q8IUQ4 282 aa17.29■□□□□ 0.36
CAPN3-207ENST00000397200 ZNF654Q8IZM8 581 aa17.29■□□□□ 0.36
CAPN3-207ENST00000397200 LRRC47Q8N1G4 583 aaKnown RBP17.29■□□□□ 0.36
CAPN3-207ENST00000397200 MKL1Q969V6 931 aa17.29■□□□□ 0.36
CAPN3-207ENST00000397200 SYAP1Q96A49 352 aaPredicted RBP17.29■□□□□ 0.36
CAPN3-207ENST00000397200 CLMNQ96JQ2 1002 aa17.29■□□□□ 0.36
CAPN3-207ENST00000397200 ZHX2Q9Y6X8 837 aa17.29■□□□□ 0.36
CAPN3-207ENST00000397200 GOLGA8BA8MQT2 603 aa17.29■□□□□ 0.36
CAPN3-207ENST00000397200 DTNBO60941 627 aa17.29■□□□□ 0.36
CAPN3-207ENST00000397200 RESTQ13127 1097 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms