RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 DDRGK1Q96HY6 314 aa12.53□□□□□ -0.4
NUP98-205ENST00000397007 TMEM47Q9BQJ4 181 aa12.53□□□□□ -0.4
NUP98-205ENST00000397007 KIAA1217Q5T5P2 1943 aa12.53□□□□□ -0.4
NUP98-205ENST00000397007 DHX32Q7L7V1 743 aaKnown RBP12.53□□□□□ -0.4
NUP98-205ENST00000397007 ESR2Q92731 530 aa12.53□□□□□ -0.4
NUP98-205ENST00000397007 TMEM87BQ96K49 555 aa12.53□□□□□ -0.4
NUP98-205ENST00000397007 AGTPBP1Q9UPW5 1226 aa12.53□□□□□ -0.4
NUP98-205ENST00000397007 PALM3A6NDB9 673 aaPredicted RBP12.52□□□□□ -0.4
NUP98-205ENST00000397007 TREML2Q5T2D2 321 aa12.52□□□□□ -0.4
NUP98-205ENST00000397007 CCDC84Q86UT8 332 aaPredicted RBP12.52□□□□□ -0.4
NUP98-205ENST00000397007 LPAR1Q92633 364 aa12.52□□□□□ -0.4
NUP98-205ENST00000397007 TNKSO95271 1327 aa12.52□□□□□ -0.4
NUP98-205ENST00000397007 ATP2A1O14983 1001 aa12.52□□□□□ -0.41
NUP98-205ENST00000397007 KDM4AO75164 1064 aa12.52□□□□□ -0.41
NUP98-205ENST00000397007 SLC3A2P08195 630 aaKnown RBP12.52□□□□□ -0.41
NUP98-205ENST00000397007 DEFB115Q30KQ5 88 aa12.52□□□□□ -0.41
NUP98-205ENST00000397007 CAPNS2Q96L46 248 aa12.52□□□□□ -0.41
NUP98-205ENST00000397007 NEK1Q96PY6 1258 aa12.52□□□□□ -0.41
NUP98-205ENST00000397007 MAD2L2Q9UI95 211 aa12.52□□□□□ -0.41
NUP98-205ENST00000397007 APPP05067 770 aa12.52□□□□□ -0.41
NUP98-205ENST00000397007 PDHBP11177 359 aa12.52□□□□□ -0.41
NUP98-205ENST00000397007 GTF2A2P52657 109 aa12.52□□□□□ -0.41
NUP98-205ENST00000397007 HTRA3P83110 453 aa12.52□□□□□ -0.41
NUP98-205ENST00000397007 CAP1Q01518 475 aa12.52□□□□□ -0.41
NUP98-205ENST00000397007 CATSPERGQ6ZRH7 1159 aa12.52□□□□□ -0.41
NUP98-205ENST00000397007 IFNL1Q8IU54 200 aa12.52□□□□□ -0.41
NUP98-205ENST00000397007 ZSCAN29Q8IWY8 852 aaPredicted RBP12.52□□□□□ -0.41
NUP98-205ENST00000397007 BRPF3Q9ULD4 1205 aa12.52□□□□□ -0.41
NUP98-205ENST00000397007 HMGB1P09429 215 aaKnown RBP12.51□□□□□ -0.41
NUP98-205ENST00000397007 INHBEP58166 350 aa12.51□□□□□ -0.41
NUP98-205ENST00000397007 CYP4F22Q6NT55 531 aa12.51□□□□□ -0.41
NUP98-205ENST00000397007 GPHNQ9NQX3 736 aaPredicted RBP12.51□□□□□ -0.41
NUP98-205ENST00000397007 MANSC4A6NHS7 340 aaPredicted RBP12.51□□□□□ -0.41
NUP98-205ENST00000397007 VCAM1P19320 739 aa12.51□□□□□ -0.41
NUP98-205ENST00000397007 SMARCA1P28370 1054 aa12.51□□□□□ -0.41
NUP98-205ENST00000397007 CCDC178Q5BJE1 867 aa12.51□□□□□ -0.41
NUP98-205ENST00000397007 USP17L2Q6R6M4 530 aa12.51□□□□□ -0.41
NUP98-205ENST00000397007 RASGRP2Q7LDG7 609 aa12.51□□□□□ -0.41
NUP98-205ENST00000397007 AMOTL1Q8IY63 956 aa12.51□□□□□ -0.41
NUP98-205ENST00000397007 FAM43AQ8N2R8 423 aa12.51□□□□□ -0.41
NUP98-205ENST00000397007 ZNF536O15090 1300 aa12.51□□□□□ -0.41
NUP98-205ENST00000397007 CRACR2BQ8N4Y2 399 aaPredicted RBP12.51□□□□□ -0.41
NUP98-205ENST00000397007 CSADQ9Y600 493 aa12.51□□□□□ -0.41
NUP98-205ENST00000397007 WDR81Q562E7 1941 aa12.51□□□□□ -0.41
NUP98-205ENST00000397007 BTBD19C9JJ37 291 aa12.5□□□□□ -0.41
NUP98-205ENST00000397007 USP17L10C9JJH3 530 aa12.5□□□□□ -0.41
NUP98-205ENST00000397007 TOP1P11387 765 aaKnown RBP12.5□□□□□ -0.41
NUP98-205ENST00000397007 ICA1Q05084 483 aa12.5□□□□□ -0.41
NUP98-205ENST00000397007 NOGQ13253 232 aa12.5□□□□□ -0.41
NUP98-205ENST00000397007 MTMR2Q13614 643 aa12.5□□□□□ -0.41
NUP98-205ENST00000397007 GRM4Q14833 912 aa12.5□□□□□ -0.41
NUP98-205ENST00000397007 NTRK3Q16288 839 aa12.5□□□□□ -0.41
NUP98-205ENST00000397007 PPP4R3BQ5MIZ7 849 aa12.5□□□□□ -0.41
NUP98-205ENST00000397007 NBPF11Q86T75 865 aa12.5□□□□□ -0.41
NUP98-205ENST00000397007 AS3MTQ9HBK9 375 aa12.5□□□□□ -0.41
NUP98-205ENST00000397007 ZHX2Q9Y6X8 837 aa12.5□□□□□ -0.41
NUP98-205ENST00000397007 BCRP11274 1271 aa12.5□□□□□ -0.41
NUP98-205ENST00000397007 RNF20Q5VTR2 975 aa12.5□□□□□ -0.41
NUP98-205ENST00000397007 DCAF4Q8WV16 495 aa12.5□□□□□ -0.41
NUP98-205ENST00000397007 MORF4L1Q9UBU8 362 aa12.5□□□□□ -0.41
NUP98-205ENST00000397007 WDR46O15213 610 aaKnown RBP12.5□□□□□ -0.41
NUP98-205ENST00000397007 AOC2O75106 756 aa12.5□□□□□ -0.41
NUP98-205ENST00000397007 NDUFB10O96000 172 aa12.5□□□□□ -0.41
NUP98-205ENST00000397007 MCM5P33992 734 aa12.5□□□□□ -0.41
NUP98-205ENST00000397007 SNAPC2Q13487 334 aa12.5□□□□□ -0.41
NUP98-205ENST00000397007 KIAA1211Q6ZU35 1233 aa12.5□□□□□ -0.41
NUP98-205ENST00000397007 WBP1LQ9NX94 342 aa12.5□□□□□ -0.41
NUP98-205ENST00000397007 SLC10A4Q96EP9 437 aa12.49□□□□□ -0.41
NUP98-205ENST00000397007 DDAH1O94760 285 aa12.49□□□□□ -0.41
NUP98-205ENST00000397007 TSPY3P0CV98 308 aa12.49□□□□□ -0.41
NUP98-205ENST00000397007 TSPY8P0CW00 308 aa12.49□□□□□ -0.41
NUP98-205ENST00000397007 CETPP11597 493 aa12.49□□□□□ -0.41
NUP98-205ENST00000397007 C17orf99Q6UX52 265 aa12.49□□□□□ -0.41
NUP98-205ENST00000397007 SHISA4Q96DD7 197 aa12.49□□□□□ -0.41
NUP98-205ENST00000397007 C22orf23Q9BZE7 217 aa12.49□□□□□ -0.41
NUP98-205ENST00000397007 RIOX1Q9H6W3 641 aa12.49□□□□□ -0.41
NUP98-205ENST00000397007 PRC1O43663 620 aa12.49□□□□□ -0.41
NUP98-205ENST00000397007 ZNF157P51786 506 aaPredicted RBP12.49□□□□□ -0.41
NUP98-205ENST00000397007 KIF23Q02241 960 aaPredicted RBP12.49□□□□□ -0.41
NUP98-205ENST00000397007 ZNF543Q08ER8 600 aa12.49□□□□□ -0.41
NUP98-205ENST00000397007 OTUD5Q96G74 571 aa12.49□□□□□ -0.41
NUP98-205ENST00000397007 MKNK2Q9HBH9 465 aa12.49□□□□□ -0.41
NUP98-205ENST00000397007 F5H6K3 240 aa12.48□□□□□ -0.41
NUP98-205ENST00000397007 CD2BP2O95400 341 aaKnown RBP12.48□□□□□ -0.41
NUP98-205ENST00000397007 USP14P54578 494 aa12.48□□□□□ -0.41
NUP98-205ENST00000397007 KLRC3Q07444 240 aa12.48□□□□□ -0.41
NUP98-205ENST00000397007 SPP2Q13103 211 aa12.48□□□□□ -0.41
NUP98-205ENST00000397007 RANBP17Q9H2T7 1088 aaKnown RBP12.48□□□□□ -0.41
NUP98-205ENST00000397007 BRCA2P51587 3418 aa12.48□□□□□ -0.41
NUP98-205ENST00000397007 CYTH3O43739 400 aa12.48□□□□□ -0.41
NUP98-205ENST00000397007 ZNF444Q8N0Y2 327 aaPredicted RBP12.48□□□□□ -0.41
NUP98-205ENST00000397007 PICK1Q9NRD5 415 aa12.48□□□□□ -0.41
NUP98-205ENST00000397007 DOCK3Q8IZD9 2030 aa12.48□□□□□ -0.41
NUP98-205ENST00000397007 CPA1P15085 419 aa12.48□□□□□ -0.41
NUP98-205ENST00000397007 PRKG1Q13976 671 aa12.48□□□□□ -0.41
NUP98-205ENST00000397007 MAF1Q9H063 256 aa12.48□□□□□ -0.41
NUP98-205ENST00000397007 SPDYE16A6NNV3 312 aaPredicted RBP12.47□□□□□ -0.41
NUP98-205ENST00000397007 CTGFP29279 349 aa12.47□□□□□ -0.41
NUP98-205ENST00000397007 APOA5Q6Q788 366 aa12.47□□□□□ -0.41
NUP98-205ENST00000397007 R3HDMLQ9H3Y0 253 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms