RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 PDZD4Q76G19 769 aaPredicted RBP17.36■□□□□ 0.37
GNE-202ENST00000396594 CALR3Q96L12 384 aaKnown RBP17.36■□□□□ 0.37
GNE-202ENST00000396594 TRPC6Q9Y210 931 aa17.36■□□□□ 0.37
GNE-202ENST00000396594 OVOS2A0A0G2JMS6 1433 aa17.36■□□□□ 0.37
GNE-202ENST00000396594 OVOS2A0A0J9YW53 1432 aa17.36■□□□□ 0.37
GNE-202ENST00000396594 OVOS2Q6IE36 1432 aa17.36■□□□□ 0.37
GNE-202ENST00000396594 FAM184BQ9ULE4 1060 aa17.36■□□□□ 0.37
GNE-202ENST00000396594 DCAF17Q5H9S7 520 aaPredicted RBP17.36■□□□□ 0.37
GNE-202ENST00000396594 NBPF11Q86T75 865 aa17.36■□□□□ 0.37
GNE-202ENST00000396594 TEKT3Q9BXF9 490 aa17.36■□□□□ 0.37
GNE-202ENST00000396594 NRBP2Q9NSY0 501 aa17.36■□□□□ 0.37
GNE-202ENST00000396594 ANAPC4Q9UJX5 808 aa17.36■□□□□ 0.37
GNE-202ENST00000396594 ZNF804BA4D1E1 1349 aa17.36■□□□□ 0.37
GNE-202ENST00000396594 CCDC169A6NNP5 214 aa17.35■□□□□ 0.37
GNE-202ENST00000396594 ZNF202O95125 648 aa17.35■□□□□ 0.37
GNE-202ENST00000396594 IBSPP21815 317 aaPredicted RBP17.35■□□□□ 0.37
GNE-202ENST00000396594 C2CD5Q86YS7 1000 aa17.35■□□□□ 0.37
GNE-202ENST00000396594 IPO4Q8TEX9 1081 aaKnown RBP17.35■□□□□ 0.37
GNE-202ENST00000396594 CD2APQ9Y5K6 639 aa17.35■□□□□ 0.37
GNE-202ENST00000396594 METP08581 1390 aa17.35■□□□□ 0.37
GNE-202ENST00000396594 EIF3CLB5ME19 914 aaKnown RBP17.35■□□□□ 0.37
GNE-202ENST00000396594 DNA2P51530 1060 aa17.35■□□□□ 0.37
GNE-202ENST00000396594 TFDP1Q14186 410 aa17.35■□□□□ 0.37
GNE-202ENST00000396594 SETDB1Q15047 1291 aa17.35■□□□□ 0.37
GNE-202ENST00000396594 NOSTRINQ8IVI9 506 aa17.35■□□□□ 0.37
GNE-202ENST00000396594 EIF3CQ99613 913 aaKnown RBP17.35■□□□□ 0.37
GNE-202ENST00000396594 NKIRAS1Q9NYS0 192 aa17.35■□□□□ 0.37
GNE-202ENST00000396594 LCMT1Q9UIC8 334 aa17.35■□□□□ 0.37
GNE-202ENST00000396594 GTPBP6O43824 516 aaPredicted RBP17.35■□□□□ 0.37
GNE-202ENST00000396594 BRD1O95696 1058 aa17.35■□□□□ 0.37
GNE-202ENST00000396594 CMA1P23946 247 aa17.35■□□□□ 0.37
GNE-202ENST00000396594 BPIFB4P59827 614 aa17.35■□□□□ 0.37
GNE-202ENST00000396594 SUPT20HL1Q3ZLR7 823 aa17.35■□□□□ 0.37
GNE-202ENST00000396594 NCAPH2Q6IBW4 605 aa17.35■□□□□ 0.37
GNE-202ENST00000396594 NEK8Q86SG6 692 aa17.35■□□□□ 0.37
GNE-202ENST00000396594 SECISBP2LQ93073 1101 aaKnown RBP17.35■□□□□ 0.37
GNE-202ENST00000396594 COL4A3BPQ9Y5P4 624 aa17.35■□□□□ 0.37
GNE-202ENST00000396594 BZW2Q9Y6E2 419 aaKnown RBP17.35■□□□□ 0.37
GNE-202ENST00000396594 PLCB3Q01970 1234 aa17.35■□□□□ 0.37
GNE-202ENST00000396594 CNPY4Q8N129 248 aa17.35■□□□□ 0.37
GNE-202ENST00000396594 FOXP1Q9H334 677 aaPredicted RBP17.35■□□□□ 0.37
GNE-202ENST00000396594 UTP11Q9Y3A2 253 aaKnown RBP17.35■□□□□ 0.37
GNE-202ENST00000396594 WDR19Q8NEZ3 1342 aa17.35■□□□□ 0.37
GNE-202ENST00000396594 SPOPO43791 374 aa17.34■□□□□ 0.37
GNE-202ENST00000396594 GAS7O60861 476 aa17.34■□□□□ 0.37
GNE-202ENST00000396594 ZNF569Q5MCW4 686 aa17.34■□□□□ 0.37
GNE-202ENST00000396594 MYSM1Q5VVJ2 828 aa17.34■□□□□ 0.37
GNE-202ENST00000396594 MIER3Q7Z3K6 550 aa17.34■□□□□ 0.37
GNE-202ENST00000396594 TRIM11Q96F44 468 aa17.34■□□□□ 0.37
GNE-202ENST00000396594 TULP4Q9NRJ4 1543 aa17.34■□□□□ 0.37
GNE-202ENST00000396594 SCG2P13521 617 aa17.34■□□□□ 0.37
GNE-202ENST00000396594 FANCCQ00597 558 aa17.34■□□□□ 0.37
GNE-202ENST00000396594 ISM2Q6H9L7 571 aa17.34■□□□□ 0.37
GNE-202ENST00000396594 ZNF354CQ86Y25 554 aa17.34■□□□□ 0.37
GNE-202ENST00000396594 GRK7Q8WTQ7 553 aa17.34■□□□□ 0.37
GNE-202ENST00000396594 TRIM6Q9C030 488 aaPredicted RBP17.34■□□□□ 0.37
GNE-202ENST00000396594 BBOF1Q8ND07 529 aa17.34■□□□□ 0.37
GNE-202ENST00000396594 PPP6R2O75170 966 aa17.34■□□□□ 0.37
GNE-202ENST00000396594 RAPGEF1Q13905 1077 aa17.34■□□□□ 0.37
GNE-202ENST00000396594 CDC37Q16543 378 aaPredicted RBP17.34■□□□□ 0.37
GNE-202ENST00000396594 SFMBT2Q5VUG0 894 aa17.34■□□□□ 0.37
GNE-202ENST00000396594 FANCBQ8NB91 859 aa17.34■□□□□ 0.37
GNE-202ENST00000396594 HAUS1Q96CS2 278 aa17.34■□□□□ 0.37
GNE-202ENST00000396594 RNF216Q9NWF9 866 aaPredicted RBP17.34■□□□□ 0.37
GNE-202ENST00000396594 ADCY9O60503 1353 aa17.34■□□□□ 0.37
GNE-202ENST00000396594 PNMA6EA0A0J9YXQ4 647 aa17.34■□□□□ 0.37
GNE-202ENST00000396594 TXKP42681 527 aa17.34■□□□□ 0.37
GNE-202ENST00000396594 ZMYM1Q5SVZ6 1142 aa17.34■□□□□ 0.37
GNE-202ENST00000396594 FBXO11Q86XK2 927 aa17.34■□□□□ 0.37
GNE-202ENST00000396594 FBF1Q8TES7 1133 aa17.34■□□□□ 0.37
GNE-202ENST00000396594 SPHKAPQ2M3C7 1700 aa17.33■□□□□ 0.37
GNE-202ENST00000396594 SMCO2A6NFE2 343 aa17.33■□□□□ 0.37
GNE-202ENST00000396594 OR52Z1P0C646 297 aa17.33■□□□□ 0.37
GNE-202ENST00000396594 HERC4Q5GLZ8 1057 aaPredicted RBP17.33■□□□□ 0.37
GNE-202ENST00000396594 AGTPBP1Q9UPW5 1226 aa17.33■□□□□ 0.37
GNE-202ENST00000396594 ERBB3P21860 1342 aa17.33■□□□□ 0.37
GNE-202ENST00000396594 DLC1Q96QB1 1528 aa17.33■□□□□ 0.36
GNE-202ENST00000396594 KRT5P13647 590 aa17.33■□□□□ 0.36
GNE-202ENST00000396594 SLC4A8Q2Y0W8 1093 aa17.33■□□□□ 0.36
GNE-202ENST00000396594 RTKN2Q8IZC4 609 aa17.33■□□□□ 0.36
GNE-202ENST00000396594 TGFBRAP1Q8WUH2 860 aa17.33■□□□□ 0.36
GNE-202ENST00000396594 WDR11Q9BZH6 1224 aa17.33■□□□□ 0.36
GNE-202ENST00000396594 SAMD15Q9P1V8 674 aa17.33■□□□□ 0.36
GNE-202ENST00000396594 PPEF1O14829 653 aaPredicted RBP17.33■□□□□ 0.36
GNE-202ENST00000396594 ZNF365Q70YC5 407 aa17.33■□□□□ 0.36
GNE-202ENST00000396594 FAM160B2Q86V87 743 aa17.33■□□□□ 0.36
GNE-202ENST00000396594 RAB17Q9H0T7 212 aa17.33■□□□□ 0.36
GNE-202ENST00000396594 USP31Q70CQ4 1352 aa17.33■□□□□ 0.36
GNE-202ENST00000396594 TMOD1P28289 359 aa17.33■□□□□ 0.36
GNE-202ENST00000396594 ODR4Q5SWX8 454 aa17.33■□□□□ 0.36
GNE-202ENST00000396594 LARSQ9P2J5 1176 aaKnown RBP17.33■□□□□ 0.36
GNE-202ENST00000396594 ADD3Q9UEY8 706 aaKnown RBP17.33■□□□□ 0.36
GNE-202ENST00000396594 GUCA1BQ9UMX6 200 aa17.33■□□□□ 0.36
GNE-202ENST00000396594 KDM6BO15054 1643 aa17.32■□□□□ 0.36
GNE-202ENST00000396594 EXOC3O60645 756 aa17.32■□□□□ 0.36
GNE-202ENST00000396594 ZNF853P0CG23 659 aa17.32■□□□□ 0.36
GNE-202ENST00000396594 MAN1A1P33908 653 aa17.32■□□□□ 0.36
GNE-202ENST00000396594 CERKLQ49MI3 558 aaPredicted RBP17.32■□□□□ 0.36
GNE-202ENST00000396594 MYOCDQ8IZQ8 938 aa17.32■□□□□ 0.36
GNE-202ENST00000396594 P3H4Q92791 437 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms