RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 HYOU1Q9Y4L1 999 aa15.38■□□□□ 0.05
COL4A3-202ENST00000396578 TEX11Q8IYF3 940 aa15.38■□□□□ 0.05
COL4A3-202ENST00000396578 BANK1Q8NDB2 785 aa15.38■□□□□ 0.05
COL4A3-202ENST00000396578 SCYL1Q96KG9 808 aa15.38■□□□□ 0.05
COL4A3-202ENST00000396578 V9GY48 417 aaPredicted RBP15.38■□□□□ 0.05
COL4A3-202ENST00000396578 XRCC5P13010 732 aaKnown RBP15.37■□□□□ 0.05
COL4A3-202ENST00000396578 PPP2R5BQ15173 497 aa15.37■□□□□ 0.05
COL4A3-202ENST00000396578 JADE1Q6IE81 842 aa15.37■□□□□ 0.05
COL4A3-202ENST00000396578 TEKT1Q969V4 418 aa15.37■□□□□ 0.05
COL4A3-202ENST00000396578 PLEKHA4Q9H4M7 779 aa15.37■□□□□ 0.05
COL4A3-202ENST00000396578 LIG3P49916 1009 aa15.37■□□□□ 0.05
COL4A3-202ENST00000396578 CWF19L2Q2TBE0 894 aaKnown RBP15.37■□□□□ 0.05
COL4A3-202ENST00000396578 KRT25Q7Z3Z0 450 aa15.37■□□□□ 0.05
COL4A3-202ENST00000396578 PICK1Q9NRD5 415 aa15.37■□□□□ 0.05
COL4A3-202ENST00000396578 RAB20Q9NX57 234 aa15.37■□□□□ 0.05
COL4A3-202ENST00000396578 KDM3AQ9Y4C1 1321 aa15.37■□□□□ 0.05
COL4A3-202ENST00000396578 SEC24BO95487 1268 aa15.37■□□□□ 0.05
COL4A3-202ENST00000396578 TRIM56Q9BRZ2 755 aaKnown RBP15.37■□□□□ 0.05
COL4A3-202ENST00000396578 XPO4Q9C0E2 1151 aaKnown RBP15.37■□□□□ 0.05
COL4A3-202ENST00000396578 NCOA5Q9HCD5 579 aaKnown RBP15.37■□□□□ 0.05
COL4A3-202ENST00000396578 ORC6Q9Y5N6 252 aa15.37■□□□□ 0.05
COL4A3-202ENST00000396578 TOPBP1Q92547 1522 aa15.37■□□□□ 0.05
COL4A3-202ENST00000396578 KRT19P08727 400 aa15.37■□□□□ 0.05
COL4A3-202ENST00000396578 LRRC8CQ8TDW0 803 aa15.37■□□□□ 0.05
COL4A3-202ENST00000396578 IBTKQ9P2D0 1353 aaPredicted RBP15.37■□□□□ 0.05
COL4A3-202ENST00000396578 SUN1O94901 812 aa15.37■□□□□ 0.05
COL4A3-202ENST00000396578 APOEP02649 317 aa15.37■□□□□ 0.05
COL4A3-202ENST00000396578 MORC4Q8TE76 937 aa15.37■□□□□ 0.05
COL4A3-202ENST00000396578 TTC4O95801 387 aa15.37■□□□□ 0.05
COL4A3-202ENST00000396578 ZNF277Q9NRM2 450 aaPredicted RBP15.37■□□□□ 0.05
COL4A3-202ENST00000396578 ADCY7P51828 1080 aa15.36■□□□□ 0.05
COL4A3-202ENST00000396578 BIRC2Q13490 618 aa15.36■□□□□ 0.05
COL4A3-202ENST00000396578 BRDTQ58F21 947 aaPredicted RBP15.36■□□□□ 0.05
COL4A3-202ENST00000396578 DYMQ7RTS9 669 aa15.36■□□□□ 0.05
COL4A3-202ENST00000396578 HELBQ8NG08 1087 aaPredicted RBP15.36■□□□□ 0.05
COL4A3-202ENST00000396578 EYA3Q99504 573 aa15.36■□□□□ 0.05
COL4A3-202ENST00000396578 NSFL1CQ9UNZ2 370 aaKnown RBP15.36■□□□□ 0.05
COL4A3-202ENST00000396578 ARHGAP44Q17R89 818 aa15.36■□□□□ 0.05
COL4A3-202ENST00000396578 TSC1Q92574 1164 aa15.36■□□□□ 0.05
COL4A3-202ENST00000396578 KCNJ18B7U540 433 aa15.36■□□□□ 0.05
COL4A3-202ENST00000396578 CD19P15391 556 aa15.36■□□□□ 0.05
COL4A3-202ENST00000396578 PNOCQ13519 176 aa15.36■□□□□ 0.05
COL4A3-202ENST00000396578 KCNJ12Q14500 433 aa15.36■□□□□ 0.05
COL4A3-202ENST00000396578 SEPT10Q9P0V9 454 aa15.36■□□□□ 0.05
COL4A3-202ENST00000396578 LRWD1Q9UFC0 647 aa15.36■□□□□ 0.05
COL4A3-202ENST00000396578 IFNB1P01574 187 aa15.36■□□□□ 0.05
COL4A3-202ENST00000396578 PUM3Q15397 648 aaKnown RBP15.36■□□□□ 0.05
COL4A3-202ENST00000396578 ANKRD20A4Q4UJ75 823 aa15.36■□□□□ 0.05
COL4A3-202ENST00000396578 ANKRD20A8PQ5CZ79 823 aa15.36■□□□□ 0.05
COL4A3-202ENST00000396578 ANKRD20A2Q5SQ80 823 aa15.36■□□□□ 0.05
COL4A3-202ENST00000396578 ANKRD20A1Q5TYW2 823 aa15.36■□□□□ 0.05
COL4A3-202ENST00000396578 DIS3L2Q8IYB7 885 aaKnown RBP15.36■□□□□ 0.05
COL4A3-202ENST00000396578 OR8K1Q8NGG5 319 aa15.36■□□□□ 0.05
COL4A3-202ENST00000396578 CLEC11AQ9Y240 323 aa15.36■□□□□ 0.05
COL4A3-202ENST00000396578 ABCC1P33527 1531 aa15.36■□□□□ 0.05
COL4A3-202ENST00000396578 ZFYVE9O95405 1425 aa15.36■□□□□ 0.05
COL4A3-202ENST00000396578 CDC37L1Q7L3B6 337 aa15.36■□□□□ 0.05
COL4A3-202ENST00000396578 PDCD7Q8N8D1 485 aaKnown RBP15.36■□□□□ 0.05
COL4A3-202ENST00000396578 PSPC1Q8WXF1 523 aaKnown RBP15.36■□□□□ 0.05
COL4A3-202ENST00000396578 EIF2AQ9BY44 585 aaKnown RBP15.36■□□□□ 0.05
COL4A3-202ENST00000396578 SNX14Q9Y5W7 946 aa15.36■□□□□ 0.05
COL4A3-202ENST00000396578 GADD45BO75293 160 aaPredicted RBP15.35■□□□□ 0.05
COL4A3-202ENST00000396578 STAM2O75886 525 aa15.35■□□□□ 0.05
COL4A3-202ENST00000396578 PPME1Q9Y570 386 aa15.35■□□□□ 0.05
COL4A3-202ENST00000396578 TNNI1P19237 187 aa15.35■□□□□ 0.05
COL4A3-202ENST00000396578 TRIM50Q86XT4 487 aa15.35■□□□□ 0.05
COL4A3-202ENST00000396578 NT5C3AQ9H0P0 336 aa15.35■□□□□ 0.05
COL4A3-202ENST00000396578 CABP7Q86V35 215 aa15.35■□□□□ 0.05
COL4A3-202ENST00000396578 JAG2Q9Y219 1238 aa15.35■□□□□ 0.05
COL4A3-202ENST00000396578 DDX39AO00148 427 aaKnown RBP15.35■□□□□ 0.05
COL4A3-202ENST00000396578 PFDN6O15212 129 aa15.35■□□□□ 0.05
COL4A3-202ENST00000396578 U2AF1L4Q8WU68 220 aaKnown RBP15.35■□□□□ 0.05
COL4A3-202ENST00000396578 RUNDC3BQ96NL0 473 aa15.35■□□□□ 0.05
COL4A3-202ENST00000396578 KCNG1Q9UIX4 513 aa15.35■□□□□ 0.05
COL4A3-202ENST00000396578 CD2APQ9Y5K6 639 aa15.35■□□□□ 0.05
COL4A3-202ENST00000396578 WDR7Q9Y4E6 1490 aa15.35■□□□□ 0.05
COL4A3-202ENST00000396578 FRMD3A2A2Y4 597 aa15.35■□□□□ 0.05
COL4A3-202ENST00000396578 SART1O43290 800 aaKnown RBP15.35■□□□□ 0.05
COL4A3-202ENST00000396578 ABCB4P21439 1286 aa15.35■□□□□ 0.05
COL4A3-202ENST00000396578 DNM2P50570 870 aa15.35■□□□□ 0.05
COL4A3-202ENST00000396578 ESRRGP62508 458 aa15.35■□□□□ 0.05
COL4A3-202ENST00000396578 TRPC6Q9Y210 931 aa15.35■□□□□ 0.05
COL4A3-202ENST00000396578 PHKBQ93100 1093 aa15.34■□□□□ 0.05
COL4A3-202ENST00000396578 ACSBG1Q96GR2 724 aa15.34■□□□□ 0.05
COL4A3-202ENST00000396578 C14orf93Q9H972 538 aaKnown RBP15.34■□□□□ 0.05
COL4A3-202ENST00000396578 NLRC4Q9NPP4 1024 aa15.34■□□□□ 0.05
COL4A3-202ENST00000396578 NOD1Q9Y239 953 aa15.34■□□□□ 0.05
COL4A3-202ENST00000396578 GARSP41250 739 aaKnown RBP15.34■□□□□ 0.05
COL4A3-202ENST00000396578 MORC3Q14149 939 aa15.34■□□□□ 0.05
COL4A3-202ENST00000396578 CD109Q6YHK3 1445 aa15.34■□□□□ 0.05
COL4A3-202ENST00000396578 MYCLP12524 364 aaPredicted RBP15.34■□□□□ 0.05
COL4A3-202ENST00000396578 APBA1Q02410 837 aa15.34■□□□□ 0.05
COL4A3-202ENST00000396578 NONOQ15233 471 aaKnown RBP eCLIP15.34■□□□□ 0.05
COL4A3-202ENST00000396578 GPHNQ9NQX3 736 aaPredicted RBP15.34■□□□□ 0.05
COL4A3-202ENST00000396578 GPAA1O43292 621 aa15.34■□□□□ 0.05
COL4A3-202ENST00000396578 GRM1Q13255 1194 aa15.34■□□□□ 0.05
COL4A3-202ENST00000396578 APPBP2Q92624 585 aa15.34■□□□□ 0.05
COL4A3-202ENST00000396578 CTTNBP2Q8WZ74 1663 aa15.34■□□□□ 0.05
COL4A3-202ENST00000396578 CHRNA2Q15822 529 aa15.34■□□□□ 0.05
COL4A3-202ENST00000396578 TRMT44Q8IYL2 757 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms