RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 ASPRV1Q53RT3 343 aa15.9■□□□□ 0.14
VAPB-202ENST00000395802 GPATCH4Q5T3I0 446 aaKnown RBP15.9■□□□□ 0.14
VAPB-202ENST00000395802 RAB11FIP4Q86YS3 637 aa15.9■□□□□ 0.14
VAPB-202ENST00000395802 GMCL1P1Q8NEA9 526 aa15.9■□□□□ 0.14
VAPB-202ENST00000395802 RNF26Q9BY78 433 aaPredicted RBP15.9■□□□□ 0.14
VAPB-202ENST00000395802 ZNF112Q9UJU3 913 aa15.9■□□□□ 0.14
VAPB-202ENST00000395802 GREB1LQ9C091 1923 aaPredicted RBP15.9■□□□□ 0.14
VAPB-202ENST00000395802 WDR33Q9C0J8 1336 aaKnown RBP15.9■□□□□ 0.14
VAPB-202ENST00000395802 NBR1Q14596 966 aa15.89■□□□□ 0.13
VAPB-202ENST00000395802 AS3MTQ9HBK9 375 aa15.89■□□□□ 0.13
VAPB-202ENST00000395802 GOPCQ9HD26 462 aa15.89■□□□□ 0.13
VAPB-202ENST00000395802 PICK1Q9NRD5 415 aa15.89■□□□□ 0.13
VAPB-202ENST00000395802 FAM217BQ9NTX9 383 aaPredicted RBP15.89■□□□□ 0.13
VAPB-202ENST00000395802 ORC3Q9UBD5 711 aaPredicted RBP15.89■□□□□ 0.13
VAPB-202ENST00000395802 STX6O43752 255 aa15.89■□□□□ 0.13
VAPB-202ENST00000395802 DEXIO95424 95 aa15.89■□□□□ 0.13
VAPB-202ENST00000395802 FMNL1O95466 1100 aaPredicted RBP15.89■□□□□ 0.13
VAPB-202ENST00000395802 CTDNEP1O95476 244 aa15.89■□□□□ 0.13
VAPB-202ENST00000395802 SLURP2P0DP57 97 aa15.89■□□□□ 0.13
VAPB-202ENST00000395802 XBP1P17861 261 aa15.89■□□□□ 0.13
VAPB-202ENST00000395802 GUCY1A2P33402 732 aa15.89■□□□□ 0.13
VAPB-202ENST00000395802 NTRK3Q16288 839 aa15.89■□□□□ 0.13
VAPB-202ENST00000395802 TMTC3Q6ZXV5 915 aa15.89■□□□□ 0.13
VAPB-202ENST00000395802 DCAF4Q8WV16 495 aa15.89■□□□□ 0.13
VAPB-202ENST00000395802 DDX11Q96FC9 970 aa15.89■□□□□ 0.13
VAPB-202ENST00000395802 WRNIP1Q96S55 665 aa15.89■□□□□ 0.13
VAPB-202ENST00000395802 RRAGCQ9HB90 399 aa15.89■□□□□ 0.13
VAPB-202ENST00000395802 H3BQV1 296 aa15.88■□□□□ 0.13
VAPB-202ENST00000395802 JAK2O60674 1132 aa15.88■□□□□ 0.13
VAPB-202ENST00000395802 PDHBP11177 359 aa15.88■□□□□ 0.13
VAPB-202ENST00000395802 IREB2P48200 963 aaKnown RBP15.88■□□□□ 0.13
VAPB-202ENST00000395802 IFFO2Q5TF58 517 aa15.88■□□□□ 0.13
VAPB-202ENST00000395802 LDHDQ86WU2 507 aa15.88■□□□□ 0.13
VAPB-202ENST00000395802 SCYL3Q8IZE3 742 aa15.88■□□□□ 0.13
VAPB-202ENST00000395802 LRRC47Q8N1G4 583 aaKnown RBP15.88■□□□□ 0.13
VAPB-202ENST00000395802 KLRG1Q96E93 195 aa15.88■□□□□ 0.13
VAPB-202ENST00000395802 ATP6V1DQ9Y5K8 247 aa15.88■□□□□ 0.13
VAPB-202ENST00000395802 PALM3A6NDB9 673 aaPredicted RBP15.87■□□□□ 0.13
VAPB-202ENST00000395802 USP17L5A8MUK1 530 aa15.87■□□□□ 0.13
VAPB-202ENST00000395802 SNHG28P0DPA3 235 aa15.87■□□□□ 0.13
VAPB-202ENST00000395802 SYT1P21579 422 aa15.87■□□□□ 0.13
VAPB-202ENST00000395802 SLC1A4P43007 532 aa15.87■□□□□ 0.13
VAPB-202ENST00000395802 TRIM29Q14134 588 aa15.87■□□□□ 0.13
VAPB-202ENST00000395802 SLC26A6Q9BXS9 759 aa15.87■□□□□ 0.13
VAPB-202ENST00000395802 MAD2L2Q9UI95 211 aa15.87■□□□□ 0.13
VAPB-202ENST00000395802 TMX2Q9Y320 296 aa15.87■□□□□ 0.13
VAPB-202ENST00000395802 ADM5C9JUS6 153 aa15.87■□□□□ 0.13
VAPB-202ENST00000395802 KLRF2D3W0D1 207 aa15.87■□□□□ 0.13
VAPB-202ENST00000395802 PRPF3O43395 683 aaKnown RBP15.87■□□□□ 0.13
VAPB-202ENST00000395802 RRP1BQ14684 758 aaKnown RBP15.87■□□□□ 0.13
VAPB-202ENST00000395802 PRAMEF18Q5VWM3 479 aa15.87■□□□□ 0.13
VAPB-202ENST00000395802 CDCA5Q96FF9 252 aa15.87■□□□□ 0.13
VAPB-202ENST00000395802 GMCL1Q96IK5 515 aa15.87■□□□□ 0.13
VAPB-202ENST00000395802 MTMR7Q9Y216 660 aa15.87■□□□□ 0.13
VAPB-202ENST00000395802 CSADQ9Y600 493 aa15.87■□□□□ 0.13
VAPB-202ENST00000395802 POLR2AP24928 1970 aaKnown RBP15.86■□□□□ 0.13
VAPB-202ENST00000395802 UNCXA6NJT0 531 aa15.86■□□□□ 0.13
VAPB-202ENST00000395802 F5H6K3 240 aa15.86■□□□□ 0.13
VAPB-202ENST00000395802 USP14P54578 494 aa15.86■□□□□ 0.13
VAPB-202ENST00000395802 MAP3K9P80192 1104 aa15.86■□□□□ 0.13
VAPB-202ENST00000395802 KLRC3Q07444 240 aa15.86■□□□□ 0.13
VAPB-202ENST00000395802 PKP1Q13835 747 aa15.86■□□□□ 0.13
VAPB-202ENST00000395802 NOL9Q5SY16 702 aaKnown RBP15.86■□□□□ 0.13
VAPB-202ENST00000395802 SLFN13Q68D06 897 aa15.86■□□□□ 0.13
VAPB-202ENST00000395802 TNPO1Q92973 898 aaKnown RBP15.86■□□□□ 0.13
VAPB-202ENST00000395802 PHKBQ93100 1093 aa15.86■□□□□ 0.13
VAPB-202ENST00000395802 FEZ1Q99689 392 aa15.86■□□□□ 0.13
VAPB-202ENST00000395802 SPZ1Q9BXG8 430 aa15.86■□□□□ 0.13
VAPB-202ENST00000395802 RAD21O60216 631 aa15.85■□□□□ 0.13
VAPB-202ENST00000395802 ARMC9Q7Z3E5 817 aa15.85■□□□□ 0.13
VAPB-202ENST00000395802 NBPF11Q86T75 865 aa15.85■□□□□ 0.13
VAPB-202ENST00000395802 CLEC10AQ8IUN9 316 aa15.85■□□□□ 0.13
VAPB-202ENST00000395802 FAM177A1Q8N128 213 aaPredicted RBP15.85■□□□□ 0.13
VAPB-202ENST00000395802 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.85■□□□□ 0.13
VAPB-202ENST00000395802 C8orf76Q96K31 380 aa15.85■□□□□ 0.13
VAPB-202ENST00000395802 MYH4Q9Y623 1939 aa15.85■□□□□ 0.13
VAPB-202ENST00000395802 BRD1O95696 1058 aa15.84■□□□□ 0.13
VAPB-202ENST00000395802 ZNF543Q08ER8 600 aa15.84■□□□□ 0.13
VAPB-202ENST00000395802 CCDC96Q2M329 555 aa15.84■□□□□ 0.13
VAPB-202ENST00000395802 USP17L2Q6R6M4 530 aa15.84■□□□□ 0.13
VAPB-202ENST00000395802 SIAH1Q8IUQ4 282 aa15.84■□□□□ 0.13
VAPB-202ENST00000395802 CCDC82Q8N4S0 544 aa15.84■□□□□ 0.13
VAPB-202ENST00000395802 LPAR1Q92633 364 aa15.84■□□□□ 0.13
VAPB-202ENST00000395802 ALG1Q9BT22 464 aa15.84■□□□□ 0.13
VAPB-202ENST00000395802 SEC63Q9UGP8 760 aaKnown RBP15.84■□□□□ 0.13
VAPB-202ENST00000395802 VPS37CA5D8V6 355 aaPredicted RBP15.84■□□□□ 0.13
VAPB-202ENST00000395802 USP2O75604 605 aaPredicted RBP15.84■□□□□ 0.13
VAPB-202ENST00000395802 PLEKHA8P1O95397 391 aa15.84■□□□□ 0.13
VAPB-202ENST00000395802 ZSCAN22P10073 491 aaPredicted RBP15.84■□□□□ 0.13
VAPB-202ENST00000395802 FDPSP14324 419 aaKnown RBP15.84■□□□□ 0.13
VAPB-202ENST00000395802 INPP5BP32019 993 aa15.84■□□□□ 0.13
VAPB-202ENST00000395802 JAG1P78504 1218 aa15.84■□□□□ 0.13
VAPB-202ENST00000395802 TTLL12Q14166 644 aaPredicted RBP15.84■□□□□ 0.13
VAPB-202ENST00000395802 ANKRD13AQ8IZ07 590 aa15.84■□□□□ 0.13
VAPB-202ENST00000395802 SRBD1Q8N5C6 995 aaKnown RBP15.84■□□□□ 0.13
VAPB-202ENST00000395802 WDR18Q9BV38 432 aa15.84■□□□□ 0.13
VAPB-202ENST00000395802 GLIS2Q9BZE0 524 aaPredicted RBP15.84■□□□□ 0.13
VAPB-202ENST00000395802 VCPKMTQ9H867 229 aa15.84■□□□□ 0.13
VAPB-202ENST00000395802 V9GY48 417 aaPredicted RBP15.84■□□□□ 0.13
VAPB-202ENST00000395802 USP17L10C9JJH3 530 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms