RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 VCPKMTQ9H867 229 aa19.44■□□□□ 0.7
CXCL12-206ENST00000395795 FLRT1Q9NZU1 646 aa19.44■□□□□ 0.7
CXCL12-206ENST00000395795 MYH8P13535 1937 aa19.44■□□□□ 0.7
CXCL12-206ENST00000395795 RPTORQ8N122 1335 aa19.44■□□□□ 0.7
CXCL12-206ENST00000395795 PARP14Q460N5 1801 aa19.44■□□□□ 0.7
CXCL12-206ENST00000395795 CEP290O15078 2479 aa19.43■□□□□ 0.7
CXCL12-206ENST00000395795 GPAA1O43292 621 aa19.43■□□□□ 0.7
CXCL12-206ENST00000395795 RASA1P20936 1047 aa19.43■□□□□ 0.7
CXCL12-206ENST00000395795 ICA1Q05084 483 aa19.43■□□□□ 0.7
CXCL12-206ENST00000395795 HABP4Q5JVS0 413 aaKnown RBP19.43■□□□□ 0.7
CXCL12-206ENST00000395795 GIMAP6Q6P9H5 292 aa19.43■□□□□ 0.7
CXCL12-206ENST00000395795 DIS3LQ8TF46 1054 aaKnown RBP19.43■□□□□ 0.7
CXCL12-206ENST00000395795 ARPP21Q9UBL0 812 aaPredicted RBP19.43■□□□□ 0.7
CXCL12-206ENST00000395795 EEF2P13639 858 aaKnown RBP19.42■□□□□ 0.7
CXCL12-206ENST00000395795 PTPREP23469 700 aa19.42■□□□□ 0.7
CXCL12-206ENST00000395795 DSG3P32926 999 aa19.42■□□□□ 0.7
CXCL12-206ENST00000395795 CACNB2Q08289 660 aaPredicted RBP19.42■□□□□ 0.7
CXCL12-206ENST00000395795 MAP2K5Q13163 448 aa19.42■□□□□ 0.7
CXCL12-206ENST00000395795 HDAC1Q13547 482 aaPredicted RBP19.42■□□□□ 0.7
CXCL12-206ENST00000395795 COG2Q14746 738 aa19.42■□□□□ 0.7
CXCL12-206ENST00000395795 GPATCH3Q96I76 525 aa19.42■□□□□ 0.7
CXCL12-206ENST00000395795 IGKV6D-41A0A0C4DH26 115 aa19.41■□□□□ 0.7
CXCL12-206ENST00000395795 GLRX3O76003 335 aaKnown RBP19.41■□□□□ 0.7
CXCL12-206ENST00000395795 ZFYP08048 801 aaPredicted RBP19.41■□□□□ 0.7
CXCL12-206ENST00000395795 HOXC6P09630 235 aa19.41■□□□□ 0.7
CXCL12-206ENST00000395795 PRKAR2AP13861 404 aaKnown RBP19.41■□□□□ 0.7
CXCL12-206ENST00000395795 MX1P20591 662 aa19.41■□□□□ 0.7
CXCL12-206ENST00000395795 GRB14Q14449 540 aa19.41■□□□□ 0.7
CXCL12-206ENST00000395795 ZMYM1Q5SVZ6 1142 aa19.41■□□□□ 0.7
CXCL12-206ENST00000395795 SPICE1Q8N0Z3 855 aa19.41■□□□□ 0.7
CXCL12-206ENST00000395795 LPAR1Q92633 364 aa19.41■□□□□ 0.7
CXCL12-206ENST00000395795 APBA2Q99767 749 aa19.41■□□□□ 0.7
CXCL12-206ENST00000395795 MOV10L1Q9BXT6 1211 aaKnown RBP19.41■□□□□ 0.7
CXCL12-206ENST00000395795 HMX1Q9NP08 348 aaPredicted RBP19.41■□□□□ 0.7
CXCL12-206ENST00000395795 ADAMTS5Q9UNA0 930 aa19.41■□□□□ 0.7
CXCL12-206ENST00000395795 ALPK3Q96L96 1907 aa19.41■□□□□ 0.7
CXCL12-206ENST00000395795 SLC15A5A6NIM6 579 aa19.4■□□□□ 0.7
CXCL12-206ENST00000395795 TFRCP02786 760 aaKnown RBP19.4■□□□□ 0.7
CXCL12-206ENST00000395795 RGS2P41220 211 aa19.4■□□□□ 0.7
CXCL12-206ENST00000395795 LHX8Q68G74 356 aa19.4■□□□□ 0.7
CXCL12-206ENST00000395795 NPLOC4Q8TAT6 608 aa19.4■□□□□ 0.7
CXCL12-206ENST00000395795 ATG4CQ96DT6 458 aa19.4■□□□□ 0.7
CXCL12-206ENST00000395795 PRO3102Q9H379 93 aa19.4■□□□□ 0.7
CXCL12-206ENST00000395795 KANSL2Q9H9L4 492 aa19.4■□□□□ 0.7
CXCL12-206ENST00000395795 HOXC10Q9NYD6 342 aa19.4■□□□□ 0.7
CXCL12-206ENST00000395795 STAP2Q9UGK3 403 aa19.4■□□□□ 0.7
CXCL12-206ENST00000395795 OGDHLQ9ULD0 1010 aa19.4■□□□□ 0.7
CXCL12-206ENST00000395795 COLQQ9Y215 455 aaPredicted RBP19.4■□□□□ 0.7
CXCL12-206ENST00000395795 CAPN2P17655 700 aa19.39■□□□□ 0.69
CXCL12-206ENST00000395795 CCND3P30281 292 aaPredicted RBP19.39■□□□□ 0.69
CXCL12-206ENST00000395795 CCNA1P78396 465 aa19.39■□□□□ 0.69
CXCL12-206ENST00000395795 GCC1Q96CN9 775 aa19.39■□□□□ 0.69
CXCL12-206ENST00000395795 PAWRQ96IZ0 340 aaKnown RBP19.39■□□□□ 0.69
CXCL12-206ENST00000395795 TANGO6Q9C0B7 1094 aa19.39■□□□□ 0.69
CXCL12-206ENST00000395795 SPATC1LQ9H0A9 340 aa19.39■□□□□ 0.69
CXCL12-206ENST00000395795 ARHGEF10LQ9HCE6 1279 aa19.39■□□□□ 0.69
CXCL12-206ENST00000395795 FBXO28Q9NVF7 368 aa19.39■□□□□ 0.69
CXCL12-206ENST00000395795 ERC2O15083 957 aa19.38■□□□□ 0.69
CXCL12-206ENST00000395795 WDR46O15213 610 aaKnown RBP19.38■□□□□ 0.69
CXCL12-206ENST00000395795 ZKSCAN1P17029 563 aaPredicted RBP19.38■□□□□ 0.69
CXCL12-206ENST00000395795 TRMT44Q8IYL2 757 aaKnown RBP19.38■□□□□ 0.69
CXCL12-206ENST00000395795 IFNL3Q8IZI9 196 aa19.38■□□□□ 0.69
CXCL12-206ENST00000395795 REPS2Q8NFH8 660 aa19.38■□□□□ 0.69
CXCL12-206ENST00000395795 ZNF236Q9UL36 1845 aa19.38■□□□□ 0.69
CXCL12-206ENST00000395795 TACC3Q9Y6A5 838 aa19.38■□□□□ 0.69
CXCL12-206ENST00000395795 PATL2C9JE40 543 aaKnown RBP19.37■□□□□ 0.69
CXCL12-206ENST00000395795 ERCC3P19447 782 aa19.37■□□□□ 0.69
CXCL12-206ENST00000395795 ANKRD45Q5TZF3 282 aa19.37■□□□□ 0.69
CXCL12-206ENST00000395795 AMOTL1Q8IY63 956 aa19.37■□□□□ 0.69
CXCL12-206ENST00000395795 STK11IPQ8N1F8 1099 aa19.37■□□□□ 0.69
CXCL12-206ENST00000395795 ANKLE1Q8NAG6 615 aa19.37■□□□□ 0.69
CXCL12-206ENST00000395795 SHCBP1Q8NEM2 672 aa19.37■□□□□ 0.69
CXCL12-206ENST00000395795 TRPV1Q8NER1 839 aa19.37■□□□□ 0.69
CXCL12-206ENST00000395795 DDRGK1Q96HY6 314 aa19.37■□□□□ 0.69
CXCL12-206ENST00000395795 YTHDC1Q96MU7 727 aaKnown RBP19.37■□□□□ 0.69
CXCL12-206ENST00000395795 MINDY4BA8MYZ0 360 aa19.36■□□□□ 0.69
CXCL12-206ENST00000395795 COBLO75128 1261 aa19.36■□□□□ 0.69
CXCL12-206ENST00000395795 FLOT1O75955 427 aa19.36■□□□□ 0.69
CXCL12-206ENST00000395795 GNAT2P19087 354 aa19.36■□□□□ 0.69
CXCL12-206ENST00000395795 PDE1AP54750 535 aa19.36■□□□□ 0.69
CXCL12-206ENST00000395795 TMEM132BQ14DG7 1078 aa19.36■□□□□ 0.69
CXCL12-206ENST00000395795 MB21D1Q8N884 522 aa19.36■□□□□ 0.69
CXCL12-206ENST00000395795 DPF3Q92784 378 aa19.36■□□□□ 0.69
CXCL12-206ENST00000395795 HTATIP2Q9BUP3 242 aa19.36■□□□□ 0.69
CXCL12-206ENST00000395795 NYAP2Q9P242 653 aa19.36■□□□□ 0.69
CXCL12-206ENST00000395795 PFASO15067 1338 aa19.35■□□□□ 0.69
CXCL12-206ENST00000395795 PRDM1O75626 825 aa19.35■□□□□ 0.69
CXCL12-206ENST00000395795 COL6A1P12109 1028 aa19.35■□□□□ 0.69
CXCL12-206ENST00000395795 CCDC129Q6ZRS4 1044 aa19.35■□□□□ 0.69
CXCL12-206ENST00000395795 SMC5Q8IY18 1101 aa19.35■□□□□ 0.69
CXCL12-206ENST00000395795 FSD1Q9BTV5 496 aa19.35■□□□□ 0.69
CXCL12-206ENST00000395795 SH2D4AQ9H788 454 aa19.35■□□□□ 0.69
CXCL12-206ENST00000395795 PLIN4Q96Q06 1357 aa19.34■□□□□ 0.69
CXCL12-206ENST00000395795 TRIOBPQ9H2D6 2365 aa19.34■□□□□ 0.69
CXCL12-206ENST00000395795 ADORA2AP29274 412 aa19.34■□□□□ 0.69
CXCL12-206ENST00000395795 FXR1P51114 621 aaKnown RBP eCLIP19.34■□□□□ 0.69
CXCL12-206ENST00000395795 FAM83BQ5T0W9 1011 aa19.34■□□□□ 0.69
CXCL12-206ENST00000395795 CCAR1Q8IX12 1150 aaKnown RBP19.34■□□□□ 0.69
CXCL12-206ENST00000395795 NUP88Q99567 741 aaPredicted RBP19.34■□□□□ 0.69
CXCL12-206ENST00000395795 ZNF214Q9UL59 606 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms