RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 CPLX1O14810 134 aa17.55■□□□□ 0.4
SCAF11-204ENST00000395454 RANBP6O60518 1105 aaKnown RBP17.55■□□□□ 0.4
SCAF11-204ENST00000395454 FBXO18Q8NFZ0 1043 aa17.55■□□□□ 0.4
SCAF11-204ENST00000395454 RBM46Q8TBY0 533 aaKnown RBP17.55■□□□□ 0.4
SCAF11-204ENST00000395454 ZNF341Q9BYN7 854 aa17.55■□□□□ 0.4
SCAF11-204ENST00000395454 ORC3Q9UBD5 711 aaPredicted RBP17.55■□□□□ 0.4
SCAF11-204ENST00000395454 CELF2O95319 508 aaKnown RBP17.54■□□□□ 0.4
SCAF11-204ENST00000395454 MAP3K10Q02779 954 aa17.54■□□□□ 0.4
SCAF11-204ENST00000395454 CERKLQ49MI3 558 aaPredicted RBP17.54■□□□□ 0.4
SCAF11-204ENST00000395454 TATDN1Q6P1N9 297 aa17.54■□□□□ 0.4
SCAF11-204ENST00000395454 FAM173BQ6P4H8 233 aa17.54■□□□□ 0.4
SCAF11-204ENST00000395454 ZNF444Q8N0Y2 327 aaPredicted RBP17.54■□□□□ 0.4
SCAF11-204ENST00000395454 LEO1Q8WVC0 666 aaPredicted RBP17.54■□□□□ 0.4
SCAF11-204ENST00000395454 WRNIP1Q96S55 665 aa17.54■□□□□ 0.4
SCAF11-204ENST00000395454 SLC12A7Q9Y666 1083 aa17.54■□□□□ 0.4
SCAF11-204ENST00000395454 RASA1P20936 1047 aa17.53■□□□□ 0.4
SCAF11-204ENST00000395454 CDC27P30260 824 aa17.53■□□□□ 0.4
SCAF11-204ENST00000395454 PPP2R5BQ15173 497 aa17.53■□□□□ 0.4
SCAF11-204ENST00000395454 CPLX2Q6PUV4 134 aaKnown RBP17.53■□□□□ 0.4
SCAF11-204ENST00000395454 LRSAM1Q6UWE0 723 aa17.53■□□□□ 0.4
SCAF11-204ENST00000395454 TAOK2Q9UL54 1235 aa17.53■□□□□ 0.4
SCAF11-204ENST00000395454 TSPY2A6NKD2 308 aa17.53■□□□□ 0.4
SCAF11-204ENST00000395454 GDF11O95390 407 aa17.53■□□□□ 0.4
SCAF11-204ENST00000395454 WTAPQ15007 396 aa17.53■□□□□ 0.4
SCAF11-204ENST00000395454 FAM47AQ5JRC9 791 aa17.53■□□□□ 0.4
SCAF11-204ENST00000395454 KLRG1Q96E93 195 aa17.53■□□□□ 0.4
SCAF11-204ENST00000395454 CFAP45Q9UL16 551 aa17.53■□□□□ 0.4
SCAF11-204ENST00000395454 CCDC69A6NI79 296 aa17.52■□□□□ 0.4
SCAF11-204ENST00000395454 PHF20L1A8MW92 1017 aa17.52■□□□□ 0.4
SCAF11-204ENST00000395454 MPHOSPH10O00566 681 aaKnown RBP17.52■□□□□ 0.4
SCAF11-204ENST00000395454 USP2O75604 605 aaPredicted RBP17.52■□□□□ 0.4
SCAF11-204ENST00000395454 TSPY3P0CV98 308 aa17.52■□□□□ 0.4
SCAF11-204ENST00000395454 TSPY8P0CW00 308 aa17.52■□□□□ 0.4
SCAF11-204ENST00000395454 IFNAR1P17181 557 aa17.52■□□□□ 0.4
SCAF11-204ENST00000395454 CCDC183Q5T5S1 534 aa17.52■□□□□ 0.4
SCAF11-204ENST00000395454 MOB2Q70IA6 237 aa17.52■□□□□ 0.4
SCAF11-204ENST00000395454 MICU3Q86XE3 530 aa17.52■□□□□ 0.4
SCAF11-204ENST00000395454 C8orf76Q96K31 380 aa17.52■□□□□ 0.4
SCAF11-204ENST00000395454 ERICH2A1L162 156 aa17.51■□□□□ 0.39
SCAF11-204ENST00000395454 GOLGA8AA7E2F4 631 aa17.51■□□□□ 0.39
SCAF11-204ENST00000395454 AKR1B1P15121 316 aa17.51■□□□□ 0.39
SCAF11-204ENST00000395454 INPP5BP32019 993 aa17.51■□□□□ 0.39
SCAF11-204ENST00000395454 IREB2P48200 963 aaKnown RBP17.51■□□□□ 0.39
SCAF11-204ENST00000395454 TFAP4Q01664 338 aa17.51■□□□□ 0.39
SCAF11-204ENST00000395454 RRP1BQ14684 758 aaKnown RBP17.51■□□□□ 0.39
SCAF11-204ENST00000395454 NFXL1Q6ZNB6 911 aa17.51■□□□□ 0.39
SCAF11-204ENST00000395454 UBAC1Q9BSL1 405 aa17.51■□□□□ 0.39
SCAF11-204ENST00000395454 TRPM7Q96QT4 1865 aa17.51■□□□□ 0.39
SCAF11-204ENST00000395454 TNKSO95271 1327 aa17.51■□□□□ 0.39
SCAF11-204ENST00000395454 PASKQ96RG2 1323 aa17.51■□□□□ 0.39
SCAF11-204ENST00000395454 ABCB5Q2M3G0 1257 aa17.51■□□□□ 0.39
SCAF11-204ENST00000395454 SHROOM1Q2M3G4 852 aaPredicted RBP17.51■□□□□ 0.39
SCAF11-204ENST00000395454 ARMC9Q7Z3E5 817 aa17.51■□□□□ 0.39
SCAF11-204ENST00000395454 ENAHQ8N8S7 591 aaPredicted RBP17.51■□□□□ 0.39
SCAF11-204ENST00000395454 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.51■□□□□ 0.39
SCAF11-204ENST00000395454 ZKSCAN4Q969J2 545 aaPredicted RBP17.51■□□□□ 0.39
SCAF11-204ENST00000395454 SPATA32Q96LK8 384 aa17.51■□□□□ 0.39
SCAF11-204ENST00000395454 ZSCAN10Q96SZ4 725 aaPredicted RBP17.51■□□□□ 0.39
SCAF11-204ENST00000395454 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.51■□□□□ 0.39
SCAF11-204ENST00000395454 RCOR1Q9UKL0 485 aa17.51■□□□□ 0.39
SCAF11-204ENST00000395454 MYH6P13533 1939 aa17.5■□□□□ 0.39
SCAF11-204ENST00000395454 PCNTO95613 3336 aa17.5■□□□□ 0.39
SCAF11-204ENST00000395454 CAP2P40123 477 aa17.5■□□□□ 0.39
SCAF11-204ENST00000395454 FSTL1Q12841 308 aa17.5■□□□□ 0.39
SCAF11-204ENST00000395454 CST9Q5W186 159 aa17.5■□□□□ 0.39
SCAF11-204ENST00000395454 SYNE3Q6ZMZ3 975 aa17.5■□□□□ 0.39
SCAF11-204ENST00000395454 BRAPQ7Z569 592 aa17.5■□□□□ 0.39
SCAF11-204ENST00000395454 RAB11FIP4Q86YS3 637 aa17.5■□□□□ 0.39
SCAF11-204ENST00000395454 ZNF654Q8IZM8 581 aa17.5■□□□□ 0.39
SCAF11-204ENST00000395454 CCDC17Q96LX7 622 aa17.5■□□□□ 0.39
SCAF11-204ENST00000395454 GBA2Q9HCG7 927 aaPredicted RBP17.5■□□□□ 0.39
SCAF11-204ENST00000395454 CCDC196A0A1B0GTZ2 297 aa17.49■□□□□ 0.39
SCAF11-204ENST00000395454 SYCE3A1L190 88 aa17.49■□□□□ 0.39
SCAF11-204ENST00000395454 CTNND1O60716 968 aaKnown RBP17.49■□□□□ 0.39
SCAF11-204ENST00000395454 LETM1O95202 739 aaPredicted RBP17.49■□□□□ 0.39
SCAF11-204ENST00000395454 FMNL1O95466 1100 aaPredicted RBP17.49■□□□□ 0.39
SCAF11-204ENST00000395454 GH2P01242 217 aa17.49■□□□□ 0.39
SCAF11-204ENST00000395454 ZKSCAN3Q9BRR0 538 aa17.49■□□□□ 0.39
SCAF11-204ENST00000395454 CABP5Q9NP86 173 aa17.49■□□□□ 0.39
SCAF11-204ENST00000395454 ZNF112Q9UJU3 913 aa17.49■□□□□ 0.39
SCAF11-204ENST00000395454 IQCA1Q86XH1 822 aa17.49■□□□□ 0.39
SCAF11-204ENST00000395454 C2orf69Q8N8R5 385 aa17.49■□□□□ 0.39
SCAF11-204ENST00000395454 ZNF396Q96N95 335 aaPredicted RBP17.49■□□□□ 0.39
SCAF11-204ENST00000395454 CSADQ9Y600 493 aa17.49■□□□□ 0.39
SCAF11-204ENST00000395454 PAPPA2Q9BXP8 1791 aa17.48■□□□□ 0.39
SCAF11-204ENST00000395454 UBE2Q2LH0YL09 131 aa17.48■□□□□ 0.39
SCAF11-204ENST00000395454 ASNSP08243 561 aa17.48■□□□□ 0.39
SCAF11-204ENST00000395454 RXRAP19793 462 aa17.48■□□□□ 0.39
SCAF11-204ENST00000395454 JAG1P78504 1218 aa17.48■□□□□ 0.39
SCAF11-204ENST00000395454 MAP3K9P80192 1104 aa17.48■□□□□ 0.39
SCAF11-204ENST00000395454 RTN1Q16799 776 aa17.48■□□□□ 0.39
SCAF11-204ENST00000395454 NBPF11Q86T75 865 aa17.48■□□□□ 0.39
SCAF11-204ENST00000395454 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.48■□□□□ 0.39
SCAF11-204ENST00000395454 TFIP11Q9UBB9 837 aaKnown RBP17.48■□□□□ 0.39
SCAF11-204ENST00000395454 ZBTB21Q9ULJ3 1066 aa17.48■□□□□ 0.39
SCAF11-204ENST00000395454 ATAD5Q96QE3 1844 aa17.48■□□□□ 0.39
SCAF11-204ENST00000395454 OTOFQ9HC10 1997 aa17.48■□□□□ 0.39
SCAF11-204ENST00000395454 NMT2O60551 498 aa17.47■□□□□ 0.39
SCAF11-204ENST00000395454 FKBP1BP68106 108 aa17.47■□□□□ 0.39
SCAF11-204ENST00000395454 KIF23Q02241 960 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms