RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 TNNI1P19237 187 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 TMTC1Q8IUR5 882 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 ZRANB1Q9UGI0 708 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 PDE4DQ08499 809 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 PAK1Q13153 545 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 ATP6V0A1Q93050 837 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 C19orf44Q9H6X5 657 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 PLEKHG3A1L390 1219 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 HNRNPCL2B2RXH8 293 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 HNRNPCL1O60812 293 aaKnown RBP8.18□□□□□ -1.1
SYNE2-205ENST00000394768 ATP2B4P23634 1241 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 BAG6P46379 1132 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 BPIFB4P59827 614 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 RNASELQ05823 741 aaKnown RBP8.18□□□□□ -1.1
SYNE2-205ENST00000394768 MYCT1Q8N699 235 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 WHAMMQ8TF30 809 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 VPS18Q9P253 973 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 LARSQ9P2J5 1176 aaKnown RBP8.18□□□□□ -1.1
SYNE2-205ENST00000394768 A6NJR5 290 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 CIITAP33076 1130 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 TMTC4Q5T4D3 741 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 MAP3K1Q13233 1512 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 NAA25Q14CX7 972 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 NRBF2Q96F24 287 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 IRAK4Q9NWZ3 460 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 JRKLQ9Y4A0 524 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 HIBADHP31937 336 aaKnown RBP8.18□□□□□ -1.1
SYNE2-205ENST00000394768 MLKLQ8NB16 471 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 SPDYE1Q8NFV5 336 aaPredicted RBP8.18□□□□□ -1.1
SYNE2-205ENST00000394768 CCHCR1Q8TD31 782 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 SEPT8Q92599 483 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 PHLPP2Q6ZVD8 1323 aa8.18□□□□□ -1.1
SYNE2-205ENST00000394768 CHMP2AO43633 222 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 LUC7L3O95232 432 aaKnown RBP8.17□□□□□ -1.1
SYNE2-205ENST00000394768 HCLS1P14317 486 aaPredicted RBP8.17□□□□□ -1.1
SYNE2-205ENST00000394768 FAM160A1Q05DH4 1040 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 ARHGEF16Q5VV41 709 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 MIER3Q7Z3K6 550 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 CSGALNACT2Q8N6G5 542 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 RETREG2Q8NC44 543 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 DCPSQ96C86 337 aaKnown RBP8.17□□□□□ -1.1
SYNE2-205ENST00000394768 LRGUKQ96M69 825 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 ACEP12821 1306 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 IPO5O00410 1097 aaKnown RBP8.17□□□□□ -1.1
SYNE2-205ENST00000394768 GAS7O60861 476 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 MYCLP12524 364 aaPredicted RBP8.17□□□□□ -1.1
SYNE2-205ENST00000394768 MAGEF1Q9HAY2 307 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 ARPP21Q9UBL0 812 aaPredicted RBP8.17□□□□□ -1.1
SYNE2-205ENST00000394768 TYRO3Q06418 890 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 PDXDC1Q6P996 788 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 PEX26Q7Z412 305 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 KIF2CQ99661 725 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 EFHD1Q9BUP0 239 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 ZNF408Q9H9D4 720 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 MBIPQ9NS73 344 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 CCNL1Q9UK58 526 aaPredicted RBP8.17□□□□□ -1.1
SYNE2-205ENST00000394768 GOLGA8FQ08AF8 430 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 GOLGA8DPQ0D2H9 430 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 IQCB1Q15051 598 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 LMBR1LQ6UX01 489 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 SULF1Q8IWU6 871 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 MLXIPQ9HAP2 919 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 ADD3Q9UEY8 706 aaKnown RBP8.17□□□□□ -1.1
SYNE2-205ENST00000394768 RUFY3Q7L099 469 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 COPS6Q7L5N1 327 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 METTL23Q86XA0 190 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 ESYT1Q9BSJ8 1104 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 ANGEL1Q9UNK9 670 aaKnown RBP8.17□□□□□ -1.1
SYNE2-205ENST00000394768 NDUFAB1O14561 156 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 ZNF189O75820 626 aaPredicted RBP8.17□□□□□ -1.1
SYNE2-205ENST00000394768 PCP11498 1178 aaKnown RBP8.17□□□□□ -1.1
SYNE2-205ENST00000394768 NMIQ13287 307 aaPredicted RBP8.17□□□□□ -1.1
SYNE2-205ENST00000394768 PATL1Q86TB9 770 aaKnown RBP8.17□□□□□ -1.1
SYNE2-205ENST00000394768 METTL13Q8N6R0 699 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 PARD3BQ8TEW8 1205 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 TMX3Q96JJ7 454 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 PDE6CP51160 858 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 WHAMMP3Q1A5X7 153 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 SFMBT2Q5VUG0 894 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 GDAP1L1Q96MZ0 367 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 ZNF215Q9UL58 517 aaPredicted RBP8.17□□□□□ -1.1
SYNE2-205ENST00000394768 SH3TC1Q8TE82 1336 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 LZTFL1Q9NQ48 299 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 KLHL14Q9P2G3 628 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 AOX1Q06278 1338 aa8.17□□□□□ -1.1
SYNE2-205ENST00000394768 DEUP1Q05D60 604 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 ANKRD20A4Q4UJ75 823 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 ANKRD20A8PQ5CZ79 823 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 ANKRD20A2Q5SQ80 823 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 ANKRD20A1Q5TYW2 823 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 HELBQ8NG08 1087 aaPredicted RBP8.16□□□□□ -1.1
SYNE2-205ENST00000394768 LRFN2Q9ULH4 789 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 CTNND2Q9UQB3 1225 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 TLR3O15455 904 aaKnown RBP8.16□□□□□ -1.1
SYNE2-205ENST00000394768 DLGAP5Q15398 846 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 IGSF22Q8N9C0 903 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 CCDC138Q96M89 665 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 LCMT1Q9UIC8 334 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 AMFRQ9UKV5 643 aa8.16□□□□□ -1.1
SYNE2-205ENST00000394768 TMCC1O94876 653 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms