RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 CAPN11Q9UMQ6 739 aa14.7□□□□□ -0.06
USP49-203ENST00000394253 KRT81Q14533 505 aa14.7□□□□□ -0.06
USP49-203ENST00000394253 TCP11Q8WWU5 503 aa14.7□□□□□ -0.06
USP49-203ENST00000394253 LRRC37BQ96QE4 947 aa14.7□□□□□ -0.06
USP49-203ENST00000394253 MRPS26Q9BYN8 205 aaKnown RBP14.7□□□□□ -0.06
USP49-203ENST00000394253 STRN3Q13033 797 aa14.7□□□□□ -0.06
USP49-203ENST00000394253 TRMT10CQ7L0Y3 403 aaKnown RBP14.7□□□□□ -0.06
USP49-203ENST00000394253 GLT8D2Q9H1C3 349 aa14.7□□□□□ -0.06
USP49-203ENST00000394253 CD2APQ9Y5K6 639 aa14.7□□□□□ -0.06
USP49-203ENST00000394253 HLA-DPA1P20036 260 aa14.7□□□□□ -0.06
USP49-203ENST00000394253 SMC5Q8IY18 1101 aa14.7□□□□□ -0.06
USP49-203ENST00000394253 SH3GL2Q99962 352 aa14.7□□□□□ -0.06
USP49-203ENST00000394253 FAM135AQ9P2D6 1515 aa14.7□□□□□ -0.06
USP49-203ENST00000394253 KPNA2P52292 529 aaKnown RBP14.7□□□□□ -0.06
USP49-203ENST00000394253 STX19Q8N4C7 294 aa14.7□□□□□ -0.06
USP49-203ENST00000394253 TTC25Q96NG3 672 aa14.7□□□□□ -0.06
USP49-203ENST00000394253 SLC38A10Q9HBR0 1119 aa14.7□□□□□ -0.06
USP49-203ENST00000394253 CCDC78A2IDD5 438 aa14.7□□□□□ -0.06
USP49-203ENST00000394253 RMDN2Q96LZ7 410 aa14.69□□□□□ -0.06
USP49-203ENST00000394253 ANAPC5Q9UJX4 755 aa14.69□□□□□ -0.06
USP49-203ENST00000394253 KRIT1O00522 736 aa14.69□□□□□ -0.06
USP49-203ENST00000394253 DDIT3P35638 169 aa14.69□□□□□ -0.06
USP49-203ENST00000394253 RAB3GAP1Q15042 981 aa14.69□□□□□ -0.06
USP49-203ENST00000394253 SFMBT2Q5VUG0 894 aa14.69□□□□□ -0.06
USP49-203ENST00000394253 WIZO95785 1651 aa14.69□□□□□ -0.06
USP49-203ENST00000394253 PASKQ96RG2 1323 aa14.69□□□□□ -0.06
USP49-203ENST00000394253 NVLO15381 856 aaKnown RBP14.69□□□□□ -0.06
USP49-203ENST00000394253 KLHL7Q8IXQ5 586 aa14.69□□□□□ -0.06
USP49-203ENST00000394253 NR1H4Q96RI1 486 aaPredicted RBP14.69□□□□□ -0.06
USP49-203ENST00000394253 MRPL40Q9NQ50 206 aaKnown RBP14.69□□□□□ -0.06
USP49-203ENST00000394253 DDX28Q9NUL7 540 aaKnown RBP14.69□□□□□ -0.06
USP49-203ENST00000394253 GPC4O75487 556 aa14.69□□□□□ -0.06
USP49-203ENST00000394253 TRIM37O94972 964 aa14.69□□□□□ -0.06
USP49-203ENST00000394253 EEF1GP26641 437 aaKnown RBP14.69□□□□□ -0.06
USP49-203ENST00000394253 SKA2Q8WVK7 121 aaPredicted RBP14.69□□□□□ -0.06
USP49-203ENST00000394253 OPTNQ96CV9 577 aa14.69□□□□□ -0.06
USP49-203ENST00000394253 TMPOP42166 694 aaKnown RBP14.69□□□□□ -0.06
USP49-203ENST00000394253 KHDRBS2Q5VWX1 349 aaKnown RBP14.69□□□□□ -0.06
USP49-203ENST00000394253 ARHGAP18Q8N392 663 aa14.69□□□□□ -0.06
USP49-203ENST00000394253 HFM1A2PYH4 1435 aa14.69□□□□□ -0.06
USP49-203ENST00000394253 OCM2P0CE71 109 aa14.69□□□□□ -0.06
USP49-203ENST00000394253 OCMP0CE72 109 aaPredicted RBP14.69□□□□□ -0.06
USP49-203ENST00000394253 PYGBP11216 843 aa14.69□□□□□ -0.06
USP49-203ENST00000394253 ADCY8P40145 1251 aa14.69□□□□□ -0.06
USP49-203ENST00000394253 HAND2P61296 217 aa14.69□□□□□ -0.06
USP49-203ENST00000394253 AKNAD1Q5T1N1 836 aa14.69□□□□□ -0.06
USP49-203ENST00000394253 GIPC2Q8TF65 315 aa14.69□□□□□ -0.06
USP49-203ENST00000394253 ARHGAP26Q9UNA1 814 aa14.69□□□□□ -0.06
USP49-203ENST00000394253 SLFN5Q08AF3 891 aa14.69□□□□□ -0.06
USP49-203ENST00000394253 INHBAP08476 426 aa14.68□□□□□ -0.06
USP49-203ENST00000394253 STX17P56962 302 aa14.68□□□□□ -0.06
USP49-203ENST00000394253 ANGPT1Q15389 498 aa14.68□□□□□ -0.06
USP49-203ENST00000394253 PPP6R3Q5H9R7 873 aaPredicted RBP14.68□□□□□ -0.06
USP49-203ENST00000394253 TRIM50Q86XT4 487 aa14.68□□□□□ -0.06
USP49-203ENST00000394253 PAK1Q13153 545 aa14.68□□□□□ -0.06
USP49-203ENST00000394253 ARHGEF18Q6ZSZ5 1173 aa14.68□□□□□ -0.06
USP49-203ENST00000394253 Q6ZUG5 572 aa14.68□□□□□ -0.06
USP49-203ENST00000394253 HDDC2Q7Z4H3 204 aa14.68□□□□□ -0.06
USP49-203ENST00000394253 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.68□□□□□ -0.06
USP49-203ENST00000394253 TRAIPQ9BWF2 469 aa14.68□□□□□ -0.06
USP49-203ENST00000394253 SFMBT1Q9UHJ3 866 aa14.68□□□□□ -0.06
USP49-203ENST00000394253 CCPG1Q9ULG6 757 aa14.68□□□□□ -0.06
USP49-203ENST00000394253 RAB14P61106 215 aa14.68□□□□□ -0.06
USP49-203ENST00000394253 RINT1Q6NUQ1 792 aa14.68□□□□□ -0.06
USP49-203ENST00000394253 CCDC51Q96ER9 411 aa14.68□□□□□ -0.06
USP49-203ENST00000394253 TSC22D4Q9Y3Q8 395 aa14.68□□□□□ -0.06
USP49-203ENST00000394253 GUCY2FP51841 1108 aa14.68□□□□□ -0.06
USP49-203ENST00000394253 SESTD1Q86VW0 696 aa14.68□□□□□ -0.06
USP49-203ENST00000394253 CHMP6Q96FZ7 201 aa14.68□□□□□ -0.06
USP49-203ENST00000394253 FGD6Q6ZV73 1430 aa14.68□□□□□ -0.06
USP49-203ENST00000394253 FAM133BQ5BKY9 247 aaKnown RBP14.68□□□□□ -0.06
USP49-203ENST00000394253 ZCRB1Q8TBF4 217 aaKnown RBP14.68□□□□□ -0.06
USP49-203ENST00000394253 INTS9Q9NV88 658 aaKnown RBP14.68□□□□□ -0.06
USP49-203ENST00000394253 DAB1O75553 588 aa14.68□□□□□ -0.06
USP49-203ENST00000394253 NOP53Q9NZM5 478 aaKnown RBP14.68□□□□□ -0.06
USP49-203ENST00000394253 IQCB1Q15051 598 aa14.68□□□□□ -0.06
USP49-203ENST00000394253 UQCRFS1P1P0C7P4 283 aa14.67□□□□□ -0.06
USP49-203ENST00000394253 PLCG2P16885 1265 aa14.67□□□□□ -0.06
USP49-203ENST00000394253 MCMDC2Q4G0Z9 681 aa14.67□□□□□ -0.06
USP49-203ENST00000394253 LARP6Q9BRS8 491 aaKnown RBP14.67□□□□□ -0.06
USP49-203ENST00000394253 TMOD3Q9NYL9 352 aa14.67□□□□□ -0.06
USP49-203ENST00000394253 ZNF229Q9UJW7 825 aa14.67□□□□□ -0.06
USP49-203ENST00000394253 PNMA2Q9UL42 364 aa14.67□□□□□ -0.06
USP49-203ENST00000394253 FAM95CA0A1B0GW59 222 aa14.67□□□□□ -0.06
USP49-203ENST00000394253 GSNP06396 782 aa14.67□□□□□ -0.06
USP49-203ENST00000394253 PLS1Q14651 629 aa14.67□□□□□ -0.06
USP49-203ENST00000394253 CSGALNACT2Q8N6G5 542 aa14.67□□□□□ -0.06
USP49-203ENST00000394253 KRT87PA6NCN2 255 aa14.67□□□□□ -0.06
USP49-203ENST00000394253 TBCCQ15814 346 aa14.67□□□□□ -0.06
USP49-203ENST00000394253 ENOX1Q8TC92 643 aaKnown RBP14.67□□□□□ -0.06
USP49-203ENST00000394253 HOOK2Q96ED9 719 aa14.67□□□□□ -0.06
USP49-203ENST00000394253 KCNG1Q9UIX4 513 aa14.67□□□□□ -0.06
USP49-203ENST00000394253 TRPC5Q9UL62 973 aaPredicted RBP14.67□□□□□ -0.06
USP49-203ENST00000394253 ZMYND8Q9ULU4 1186 aaPredicted RBP14.67□□□□□ -0.06
USP49-203ENST00000394253 ATP5HO75947 161 aa14.67□□□□□ -0.06
USP49-203ENST00000394253 SRGAP2BP0DMP2 458 aa14.67□□□□□ -0.06
USP49-203ENST00000394253 LONRF2Q1L5Z9 754 aa14.67□□□□□ -0.06
USP49-203ENST00000394253 BSPRYQ5W0U4 402 aa14.67□□□□□ -0.06
USP49-203ENST00000394253 TTC1Q99614 292 aa14.67□□□□□ -0.06
USP49-203ENST00000394253 MYO9BQ13459 2157 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms