RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 NBPF5PQ86XG9 351 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-204ENST00000394164 FANCBQ8NB91 859 aa11.29□□□□□ -0.6
PSEN1-204ENST00000394164 RABGGTAQ92696 567 aa11.29□□□□□ -0.6
PSEN1-204ENST00000394164 CXorf56Q9H5V9 222 aa11.29□□□□□ -0.6
PSEN1-204ENST00000394164 FAM204AQ9H8W3 233 aa11.29□□□□□ -0.6
PSEN1-204ENST00000394164 ZNF652Q9Y2D9 606 aa11.29□□□□□ -0.6
PSEN1-204ENST00000394164 V9GY48 417 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-204ENST00000394164 SPEF2Q9C093 1822 aa11.29□□□□□ -0.6
PSEN1-204ENST00000394164 NOSTRINQ8IVI9 506 aa11.29□□□□□ -0.6
PSEN1-204ENST00000394164 STAMQ92783 540 aa11.29□□□□□ -0.6
PSEN1-204ENST00000394164 FAM84BQ96KN1 310 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-204ENST00000394164 KCNH3Q9ULD8 1083 aa11.29□□□□□ -0.6
PSEN1-204ENST00000394164 DOT1LQ8TEK3 1739 aa11.28□□□□□ -0.6
PSEN1-204ENST00000394164 POLR2DO15514 142 aaKnown RBP11.28□□□□□ -0.6
PSEN1-204ENST00000394164 MMP14P50281 582 aa11.28□□□□□ -0.6
PSEN1-204ENST00000394164 TOB1P50616 345 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-204ENST00000394164 AKAP17AQ02040 695 aaKnown RBP11.28□□□□□ -0.6
PSEN1-204ENST00000394164 PTPAQ15257 358 aa11.28□□□□□ -0.6
PSEN1-204ENST00000394164 FBXW10Q5XX13 1052 aa11.28□□□□□ -0.6
PSEN1-204ENST00000394164 HDXQ7Z353 690 aa11.28□□□□□ -0.6
PSEN1-204ENST00000394164 TRMT44Q8IYL2 757 aaKnown RBP11.28□□□□□ -0.6
PSEN1-204ENST00000394164 IQUBQ8NA54 791 aa11.28□□□□□ -0.6
PSEN1-204ENST00000394164 ZNF384Q8TF68 577 aa11.28□□□□□ -0.6
PSEN1-204ENST00000394164 MAP3K14Q99558 947 aa11.28□□□□□ -0.6
PSEN1-204ENST00000394164 CNNM2Q9H8M5 875 aa11.28□□□□□ -0.6
PSEN1-204ENST00000394164 FMNL1O95466 1100 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-204ENST00000394164 EARS2Q5JPH6 523 aaKnown RBP11.28□□□□□ -0.6
PSEN1-204ENST00000394164 BEND6Q5SZJ8 279 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-204ENST00000394164 FOXP4Q8IVH2 680 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-204ENST00000394164 BAG1Q99933 345 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-204ENST00000394164 ANKZF1Q9H8Y5 726 aa11.28□□□□□ -0.6
PSEN1-204ENST00000394164 GNL3LQ9NVN8 582 aaKnown RBP11.28□□□□□ -0.6
PSEN1-204ENST00000394164 FANCLQ9NW38 375 aa11.28□□□□□ -0.6
PSEN1-204ENST00000394164 CCDC151A5D8V7 595 aa11.27□□□□□ -0.6
PSEN1-204ENST00000394164 MAP2K7O14733 419 aa11.27□□□□□ -0.6
PSEN1-204ENST00000394164 SGMS1Q86VZ5 419 aa11.27□□□□□ -0.6
PSEN1-204ENST00000394164 CRACR2BQ8N4Y2 399 aaPredicted RBP11.27□□□□□ -0.6
PSEN1-204ENST00000394164 ENAHQ8N8S7 591 aaPredicted RBP11.27□□□□□ -0.6
PSEN1-204ENST00000394164 RIN2Q8WYP3 895 aaPredicted RBP11.27□□□□□ -0.6
PSEN1-204ENST00000394164 HINFPQ9BQA5 517 aa11.27□□□□□ -0.6
PSEN1-204ENST00000394164 PCDHA5Q9Y5H7 936 aa11.27□□□□□ -0.6
PSEN1-204ENST00000394164 ROBO1Q9Y6N7 1651 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 MMP1P03956 469 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 VEGFAP15692 232 aaPredicted RBP11.27□□□□□ -0.61
PSEN1-204ENST00000394164 LIFRP42702 1097 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 AFMP43652 599 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 IFIT1BQ5T764 474 aaKnown RBP11.27□□□□□ -0.61
PSEN1-204ENST00000394164 MCTP2Q6DN12 878 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 CCDC91Q7Z6B0 441 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 METTL16Q86W50 562 aaKnown RBP11.27□□□□□ -0.61
PSEN1-204ENST00000394164 TICAM2Q86XR7 235 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 CPLX3Q8WVH0 158 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 STAG1Q8WVM7 1258 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 MRPL44Q9H9J2 332 aaKnown RBP11.27□□□□□ -0.61
PSEN1-204ENST00000394164 SERTAD1Q9UHV2 236 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 KCNG1Q9UIX4 513 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 SPATA31A5Q5VU36 1347 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 SPATA31A7Q8IWB4 1347 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 EIF3JO75822 258 aaKnown RBP11.27□□□□□ -0.61
PSEN1-204ENST00000394164 CCDC172P0C7W6 258 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 IFNAR1P17181 557 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 NLRP12P59046 1061 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 VSNL1P62760 191 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 PDE4BQ07343 736 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 ALX1Q15699 326 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 MMS22LQ6ZRQ5 1243 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 JMYQ8N9B5 988 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 ESR2Q92731 530 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 KAT2BQ92831 832 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 KIFC2Q96AC6 838 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 SETDB2Q96T68 719 aa11.27□□□□□ -0.61
PSEN1-204ENST00000394164 WNT7AO00755 349 aa11.26□□□□□ -0.61
PSEN1-204ENST00000394164 ZPR1O75312 459 aa11.26□□□□□ -0.61
PSEN1-204ENST00000394164 MAP2K2P36507 400 aa11.26□□□□□ -0.61
PSEN1-204ENST00000394164 MECOMQ03112 1051 aa11.26□□□□□ -0.61
PSEN1-204ENST00000394164 CASP8Q14790 479 aa11.26□□□□□ -0.61
PSEN1-204ENST00000394164 ZNF174Q15697 407 aa11.26□□□□□ -0.61
PSEN1-204ENST00000394164 KLHL10Q6JEL2 608 aa11.26□□□□□ -0.61
PSEN1-204ENST00000394164 TADA2BQ86TJ2 420 aa11.26□□□□□ -0.61
PSEN1-204ENST00000394164 KRI1Q8N9T8 703 aaKnown RBP11.26□□□□□ -0.61
PSEN1-204ENST00000394164 SHISA4Q96DD7 197 aa11.26□□□□□ -0.61
PSEN1-204ENST00000394164 ANKIB1Q9P2G1 1089 aa11.26□□□□□ -0.61
PSEN1-204ENST00000394164 WDR19Q8NEZ3 1342 aa11.26□□□□□ -0.61
PSEN1-204ENST00000394164 MYH15Q9Y2K3 1946 aa11.26□□□□□ -0.61
PSEN1-204ENST00000394164 TUBB4AP04350 444 aa11.26□□□□□ -0.61
PSEN1-204ENST00000394164 RPS8P62241 208 aaKnown RBP11.26□□□□□ -0.61
PSEN1-204ENST00000394164 TTC19Q6DKK2 380 aaPredicted RBP11.26□□□□□ -0.61
PSEN1-204ENST00000394164 ANKRD20A12PQ8NF67 263 aa11.26□□□□□ -0.61
PSEN1-204ENST00000394164 HSD3B7Q9H2F3 369 aa11.26□□□□□ -0.61
PSEN1-204ENST00000394164 CEP83Q9Y592 693 aa11.26□□□□□ -0.61
PSEN1-204ENST00000394164 ATRNO75882 1429 aa11.26□□□□□ -0.61
PSEN1-204ENST00000394164 COL1A1P02452 1464 aaPredicted RBP11.25□□□□□ -0.61
PSEN1-204ENST00000394164 NHSL1Q5SYE7 1610 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 LRRIQ3A6PVS8 624 aaPredicted RBP11.25□□□□□ -0.61
PSEN1-204ENST00000394164 GNAT2P19087 354 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 BRD3Q15059 726 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 EPSTI1Q96J88 318 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 NLRP3Q96P20 1036 aa11.25□□□□□ -0.61
PSEN1-204ENST00000394164 ZSCAN10Q96SZ4 725 aaPredicted RBP11.25□□□□□ -0.61
PSEN1-204ENST00000394164 RIOK1Q9BRS2 568 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms