RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 ZSWIM6Q9HCJ5 1215 aa10.21□□□□□ -0.77
CDH11-202ENST00000394156 MYO5BQ9ULV0 1848 aa10.21□□□□□ -0.77
CDH11-202ENST00000394156 MMP10P09238 476 aa10.21□□□□□ -0.77
CDH11-202ENST00000394156 ATXN8OSP0DMR3 200 aa10.21□□□□□ -0.77
CDH11-202ENST00000394156 PRDX5P30044 214 aa10.21□□□□□ -0.77
CDH11-202ENST00000394156 STXBP4Q6ZWJ1 553 aa10.21□□□□□ -0.77
CDH11-202ENST00000394156 LRWD1Q9UFC0 647 aa10.21□□□□□ -0.77
CDH11-202ENST00000394156 DESP17661 470 aa10.21□□□□□ -0.78
CDH11-202ENST00000394156 MARK3P27448 753 aa10.21□□□□□ -0.78
CDH11-202ENST00000394156 COMMD10Q9Y6G5 202 aa10.21□□□□□ -0.78
CDH11-202ENST00000394156 SCARF1Q14162 830 aa10.21□□□□□ -0.78
CDH11-202ENST00000394156 FAM47CQ5HY64 1035 aa10.21□□□□□ -0.78
CDH11-202ENST00000394156 SLF1Q9BQI6 1058 aa10.21□□□□□ -0.78
CDH11-202ENST00000394156 APOL6Q9BWW8 343 aa10.21□□□□□ -0.78
CDH11-202ENST00000394156 CSRNP2Q9H175 543 aa10.21□□□□□ -0.78
CDH11-202ENST00000394156 ZNF277Q9NRM2 450 aaPredicted RBP10.21□□□□□ -0.78
CDH11-202ENST00000394156 SFI1A8K8P3 1242 aa10.21□□□□□ -0.78
CDH11-202ENST00000394156 PTGDRQ13258 359 aa10.21□□□□□ -0.78
CDH11-202ENST00000394156 UAP1Q16222 522 aaPredicted RBP10.21□□□□□ -0.78
CDH11-202ENST00000394156 PRAMEF18Q5VWM3 479 aa10.21□□□□□ -0.78
CDH11-202ENST00000394156 SYMPKQ92797 1274 aaKnown RBP10.21□□□□□ -0.78
CDH11-202ENST00000394156 DSCC1Q9BVC3 393 aa10.21□□□□□ -0.78
CDH11-202ENST00000394156 CDCA7Q9BWT1 371 aaPredicted RBP10.21□□□□□ -0.78
CDH11-202ENST00000394156 PSTPIP2Q9H939 334 aa10.21□□□□□ -0.78
CDH11-202ENST00000394156 CWC15Q9P013 229 aaKnown RBP10.21□□□□□ -0.78
CDH11-202ENST00000394156 MTMR6Q9Y217 621 aa10.21□□□□□ -0.78
CDH11-202ENST00000394156 NEDD4P46934 1319 aa10.2□□□□□ -0.78
CDH11-202ENST00000394156 ARHGEF35A5YM69 484 aa10.2□□□□□ -0.78
CDH11-202ENST00000394156 BUB1O43683 1085 aa10.2□□□□□ -0.78
CDH11-202ENST00000394156 NEMFO60524 1076 aa10.2□□□□□ -0.78
CDH11-202ENST00000394156 FLOT1O75955 427 aa10.2□□□□□ -0.78
CDH11-202ENST00000394156 CCDC122Q5T0U0 273 aa10.2□□□□□ -0.78
CDH11-202ENST00000394156 TXLNBQ8N3L3 684 aa10.2□□□□□ -0.78
CDH11-202ENST00000394156 TRPC5Q9UL62 973 aaPredicted RBP10.2□□□□□ -0.78
CDH11-202ENST00000394156 FRMD4BQ9Y2L6 1034 aa10.2□□□□□ -0.78
CDH11-202ENST00000394156 HOXB7P09629 217 aa10.2□□□□□ -0.78
CDH11-202ENST00000394156 CYB5R4Q7L1T6 521 aa10.2□□□□□ -0.78
CDH11-202ENST00000394156 CCDC65Q8IXS2 484 aa10.2□□□□□ -0.78
CDH11-202ENST00000394156 MARCH10Q8NA82 808 aaPredicted RBP10.2□□□□□ -0.78
CDH11-202ENST00000394156 FANCBQ8NB91 859 aa10.2□□□□□ -0.78
CDH11-202ENST00000394156 CLSTN2Q9H4D0 955 aa10.2□□□□□ -0.78
CDH11-202ENST00000394156 TLDC2A0PJX2 215 aa10.2□□□□□ -0.78
CDH11-202ENST00000394156 CLCN1P35523 988 aa10.2□□□□□ -0.78
CDH11-202ENST00000394156 IL6STP40189 918 aaPredicted RBP10.2□□□□□ -0.78
CDH11-202ENST00000394156 ARL1P40616 181 aaPredicted RBP10.2□□□□□ -0.78
CDH11-202ENST00000394156 BAG6P46379 1132 aa10.2□□□□□ -0.78
CDH11-202ENST00000394156 GIGYF2Q6Y7W6 1299 aaKnown RBP10.2□□□□□ -0.78
CDH11-202ENST00000394156 PI4K2BQ8TCG2 481 aa10.2□□□□□ -0.78
CDH11-202ENST00000394156 TULP4Q9NRJ4 1543 aa10.2□□□□□ -0.78
CDH11-202ENST00000394156 ADD2P35612 726 aa10.2□□□□□ -0.78
CDH11-202ENST00000394156 MRPL12P52815 198 aaKnown RBP10.2□□□□□ -0.78
CDH11-202ENST00000394156 MYL5Q02045 173 aa10.2□□□□□ -0.78
CDH11-202ENST00000394156 DDX25Q9UHL0 483 aaKnown RBP10.2□□□□□ -0.78
CDH11-202ENST00000394156 ITSN1Q15811 1721 aa10.2□□□□□ -0.78
CDH11-202ENST00000394156 ZMYM6O95789 1325 aa10.2□□□□□ -0.78
CDH11-202ENST00000394156 AKR1B15C9JRZ8 316 aaPredicted RBP10.2□□□□□ -0.78
CDH11-202ENST00000394156 H7C1D1 291 aa10.2□□□□□ -0.78
CDH11-202ENST00000394156 U2AF2P26368 475 aaKnown RBP eCLIP10.2□□□□□ -0.78
CDH11-202ENST00000394156 SELENOSQ9BQE4 189 aa10.2□□□□□ -0.78
CDH11-202ENST00000394156 XPO4Q9C0E2 1151 aaKnown RBP10.2□□□□□ -0.78
CDH11-202ENST00000394156 ZC3H13Q5T200 1668 aaKnown RBP10.2□□□□□ -0.78
CDH11-202ENST00000394156 CCDC175P0C221 793 aa10.19□□□□□ -0.78
CDH11-202ENST00000394156 PAK1Q13153 545 aa10.19□□□□□ -0.78
CDH11-202ENST00000394156 UVSSAQ2YD98 709 aa10.19□□□□□ -0.78
CDH11-202ENST00000394156 SUGCTQ9HAC7 445 aa10.19□□□□□ -0.78
CDH11-202ENST00000394156 UNC13BO14795 1591 aa10.19□□□□□ -0.78
CDH11-202ENST00000394156 ABCB4P21439 1286 aa10.19□□□□□ -0.78
CDH11-202ENST00000394156 FNBP1Q96RU3 617 aa10.19□□□□□ -0.78
CDH11-202ENST00000394156 PIGSQ96S52 555 aa10.19□□□□□ -0.78
CDH11-202ENST00000394156 PCDHA7Q9UN72 937 aa10.19□□□□□ -0.78
CDH11-202ENST00000394156 NFE2L3Q9Y4A8 694 aa10.19□□□□□ -0.78
CDH11-202ENST00000394156 ZNF521Q96K83 1311 aa10.19□□□□□ -0.78
CDH11-202ENST00000394156 CYP2E1P05181 493 aaPredicted RBP10.19□□□□□ -0.78
CDH11-202ENST00000394156 CYLC1P35663 651 aaPredicted RBP10.19□□□□□ -0.78
CDH11-202ENST00000394156 ARHGEF1Q92888 912 aaKnown RBP10.19□□□□□ -0.78
CDH11-202ENST00000394156 CTAGE1Q96RT6 745 aa10.19□□□□□ -0.78
CDH11-202ENST00000394156 ANKFY1Q9P2R3 1169 aa10.19□□□□□ -0.78
CDH11-202ENST00000394156 TTLL3Q9Y4R7 772 aa10.19□□□□□ -0.78
CDH11-202ENST00000394156 SPATA31A3Q5VYP0 1347 aa10.19□□□□□ -0.78
CDH11-202ENST00000394156 GPBP1Q86WP2 473 aa10.19□□□□□ -0.78
CDH11-202ENST00000394156 REXO1Q8N1G1 1221 aaKnown RBP10.19□□□□□ -0.78
CDH11-202ENST00000394156 TTLL11Q8NHH1 800 aa10.19□□□□□ -0.78
CDH11-202ENST00000394156 CPS1P31327 1500 aa10.19□□□□□ -0.78
CDH11-202ENST00000394156 EPB41P11171 864 aaKnown RBP10.19□□□□□ -0.78
CDH11-202ENST00000394156 SSTR3P32745 418 aaPredicted RBP10.19□□□□□ -0.78
CDH11-202ENST00000394156 CGNQ9P2M7 1197 aaKnown RBP10.19□□□□□ -0.78
CDH11-202ENST00000394156 ZKSCAN5Q9Y2L8 839 aa10.19□□□□□ -0.78
CDH11-202ENST00000394156 NLRP12P59046 1061 aa10.19□□□□□ -0.78
CDH11-202ENST00000394156 ICA1Q05084 483 aa10.19□□□□□ -0.78
CDH11-202ENST00000394156 NONOQ15233 471 aaKnown RBP eCLIP10.19□□□□□ -0.78
CDH11-202ENST00000394156 MTERF4Q7Z6M4 381 aaKnown RBP10.19□□□□□ -0.78
CDH11-202ENST00000394156 CLEC10AQ8IUN9 316 aa10.19□□□□□ -0.78
CDH11-202ENST00000394156 IRX3P78415 501 aaPredicted RBP10.18□□□□□ -0.78
CDH11-202ENST00000394156 KIF5AQ12840 1032 aa10.18□□□□□ -0.78
CDH11-202ENST00000394156 KIAA0753Q2KHM9 967 aa10.18□□□□□ -0.78
CDH11-202ENST00000394156 PCIF1Q9H4Z3 704 aa10.18□□□□□ -0.78
CDH11-202ENST00000394156 CARMIL3Q8ND23 1372 aa10.18□□□□□ -0.78
CDH11-202ENST00000394156 MED23Q9ULK4 1368 aa10.18□□□□□ -0.78
CDH11-202ENST00000394156 PDIA4P13667 645 aaKnown RBP10.18□□□□□ -0.78
CDH11-202ENST00000394156 ZNF75DP51815 510 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms