RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 PROCA1Q8NCQ7 364 aaPredicted RBP29.86■■■□□ 2.37
HOMER3-202ENST00000392351 TTC14Q96N46 770 aa29.86■■■□□ 2.37
HOMER3-202ENST00000392351 UPF2Q9HAU5 1272 aaKnown RBP29.86■■■□□ 2.37
HOMER3-202ENST00000392351 IFIT3O14879 490 aaKnown RBP29.85■■■□□ 2.37
HOMER3-202ENST00000392351 HMGB1P09429 215 aaKnown RBP29.85■■■□□ 2.37
HOMER3-202ENST00000392351 PSMA5P28066 241 aa29.85■■■□□ 2.37
HOMER3-202ENST00000392351 DGKHQ86XP1 1220 aa29.85■■■□□ 2.37
HOMER3-202ENST00000392351 REM2Q8IYK8 340 aaPredicted RBP29.85■■■□□ 2.37
HOMER3-202ENST00000392351 PTPN18Q99952 460 aa29.85■■■□□ 2.37
HOMER3-202ENST00000392351 VCPKMTQ9H867 229 aa29.85■■■□□ 2.37
HOMER3-202ENST00000392351 GOPCQ9HD26 462 aa29.85■■■□□ 2.37
HOMER3-202ENST00000392351 ERICH2A1L162 156 aa29.84■■■□□ 2.37
HOMER3-202ENST00000392351 CASTP20810 708 aaKnown RBP29.84■■■□□ 2.37
HOMER3-202ENST00000392351 TM4SF4P48230 202 aa29.84■■■□□ 2.37
HOMER3-202ENST00000392351 ANAPC15P60006 121 aa29.84■■■□□ 2.37
HOMER3-202ENST00000392351 C12orf42Q96LP6 360 aa29.84■■■□□ 2.37
HOMER3-202ENST00000392351 TMEM47Q9BQJ4 181 aa29.84■■■□□ 2.37
HOMER3-202ENST00000392351 SYNPO2Q9UMS6 1093 aa29.84■■■□□ 2.37
HOMER3-202ENST00000392351 TOP1P11387 765 aaKnown RBP29.83■■■□□ 2.37
HOMER3-202ENST00000392351 BLOC1S2Q6QNY1 142 aa29.83■■■□□ 2.37
HOMER3-202ENST00000392351 DHX32Q7L7V1 743 aaKnown RBP29.83■■■□□ 2.37
HOMER3-202ENST00000392351 SPICE1Q8N0Z3 855 aa29.83■■■□□ 2.37
HOMER3-202ENST00000392351 BTBD19C9JJ37 291 aa29.82■■■□□ 2.36
HOMER3-202ENST00000392351 IGF2BP3O00425 579 aaKnown RBP eCLIP29.82■■■□□ 2.36
HOMER3-202ENST00000392351 CPA1P15085 419 aa29.82■■■□□ 2.36
HOMER3-202ENST00000392351 SEC23AQ15436 765 aa29.82■■■□□ 2.36
HOMER3-202ENST00000392351 TMEM67Q5HYA8 995 aa29.82■■■□□ 2.36
HOMER3-202ENST00000392351 KIAA1755Q5JYT7 1200 aa29.82■■■□□ 2.36
HOMER3-202ENST00000392351 TREML2Q5T2D2 321 aa29.82■■■□□ 2.36
HOMER3-202ENST00000392351 IFNL1Q8IU54 200 aa29.82■■■□□ 2.36
HOMER3-202ENST00000392351 TCEANC2Q96MN5 208 aa29.82■■■□□ 2.36
HOMER3-202ENST00000392351 C22orf23Q9BZE7 217 aa29.82■■■□□ 2.36
HOMER3-202ENST00000392351 AGTPBP1Q9UPW5 1226 aa29.82■■■□□ 2.36
HOMER3-202ENST00000392351 VCAM1P19320 739 aa29.81■■■□□ 2.36
HOMER3-202ENST00000392351 IFIT1BQ5T764 474 aaKnown RBP29.81■■■□□ 2.36
HOMER3-202ENST00000392351 GPAT2Q6NUI2 795 aa29.81■■■□□ 2.36
HOMER3-202ENST00000392351 FAM43AQ8N2R8 423 aa29.81■■■□□ 2.36
HOMER3-202ENST00000392351 LPAR1Q92633 364 aa29.81■■■□□ 2.36
HOMER3-202ENST00000392351 LRRC2Q9BYS8 371 aa29.81■■■□□ 2.36
HOMER3-202ENST00000392351 F5H6K3 240 aa29.81■■■□□ 2.36
HOMER3-202ENST00000392351 KLRC3Q07444 240 aa29.81■■■□□ 2.36
HOMER3-202ENST00000392351 WTAPQ15007 396 aa29.81■■■□□ 2.36
HOMER3-202ENST00000392351 GMCL1P1Q8NEA9 526 aa29.81■■■□□ 2.36
HOMER3-202ENST00000392351 IGDCC4Q8TDY8 1250 aa29.81■■■□□ 2.36
HOMER3-202ENST00000392351 ANKS1AQ92625 1134 aa29.81■■■□□ 2.36
HOMER3-202ENST00000392351 TMEM87BQ96K49 555 aa29.81■■■□□ 2.36
HOMER3-202ENST00000392351 MTA3Q9BTC8 594 aa29.81■■■□□ 2.36
HOMER3-202ENST00000392351 KAT14Q9H8E8 782 aa29.81■■■□□ 2.36
HOMER3-202ENST00000392351 WDR19Q8NEZ3 1342 aa29.8■■■□□ 2.36
HOMER3-202ENST00000392351 EXOSC10Q01780 885 aaKnown RBP29.8■■■□□ 2.36
HOMER3-202ENST00000392351 ANKRD23Q86SG2 305 aa29.8■■■□□ 2.36
HOMER3-202ENST00000392351 NDUFB10O96000 172 aa29.79■■■□□ 2.36
HOMER3-202ENST00000392351 OTUD7BQ6GQQ9 843 aa29.79■■■□□ 2.36
HOMER3-202ENST00000392351 TM6SF1Q9BZW5 370 aa29.79■■■□□ 2.36
HOMER3-202ENST00000392351 GPHNQ9NQX3 736 aaPredicted RBP29.79■■■□□ 2.36
HOMER3-202ENST00000392351 MTMR7Q9Y216 660 aa29.79■■■□□ 2.36
HOMER3-202ENST00000392351 PDHXO00330 501 aa29.78■■■□□ 2.36
HOMER3-202ENST00000392351 RPS6KB1P23443 525 aa29.78■■■□□ 2.36
HOMER3-202ENST00000392351 CHMP4CQ96CF2 233 aa29.78■■■□□ 2.36
HOMER3-202ENST00000392351 UPF3BQ9BZI7 483 aaKnown RBP29.78■■■□□ 2.36
HOMER3-202ENST00000392351 SENP2Q9HC62 589 aa29.78■■■□□ 2.36
HOMER3-202ENST00000392351 ZSWIM6Q9HCJ5 1215 aa29.78■■■□□ 2.36
HOMER3-202ENST00000392351 SH2B2O14492 632 aaPredicted RBP29.77■■■□□ 2.36
HOMER3-202ENST00000392351 SLFN13Q68D06 897 aa29.77■■■□□ 2.36
HOMER3-202ENST00000392351 RUFY3Q7L099 469 aa29.77■■■□□ 2.36
HOMER3-202ENST00000392351 PNMA1Q8ND90 353 aa29.77■■■□□ 2.36
HOMER3-202ENST00000392351 IL17RAQ96F46 866 aa29.77■■■□□ 2.36
HOMER3-202ENST00000392351 RPAP3Q9H6T3 665 aaPredicted RBP29.77■■■□□ 2.36
HOMER3-202ENST00000392351 LY9Q9HBG7 655 aa29.77■■■□□ 2.36
HOMER3-202ENST00000392351 CYP46A1Q9Y6A2 500 aa29.77■■■□□ 2.36
HOMER3-202ENST00000392351 WDR46O15213 610 aaKnown RBP29.77■■■□□ 2.36
HOMER3-202ENST00000392351 RBM25P49756 843 aaKnown RBP29.77■■■□□ 2.36
HOMER3-202ENST00000392351 PARP14Q460N5 1801 aa29.77■■■□□ 2.36
HOMER3-202ENST00000392351 MAP2K1Q02750 393 aaPredicted RBP29.76■■■□□ 2.35
HOMER3-202ENST00000392351 PABPC4Q13310 644 aaKnown RBP eCLIP29.76■■■□□ 2.35
HOMER3-202ENST00000392351 RASGRP2Q7LDG7 609 aa29.76■■■□□ 2.35
HOMER3-202ENST00000392351 NUP88Q99567 741 aaPredicted RBP29.76■■■□□ 2.35
HOMER3-202ENST00000392351 ZCCHC17Q9NP64 241 aaKnown RBP29.76■■■□□ 2.35
HOMER3-202ENST00000392351 SLC45A1Q9Y2W3 748 aa29.76■■■□□ 2.35
HOMER3-202ENST00000392351 FGD1P98174 961 aa29.75■■■□□ 2.35
HOMER3-202ENST00000392351 FAM83BQ5T0W9 1011 aa29.75■■■□□ 2.35
HOMER3-202ENST00000392351 TANGO6Q9C0B7 1094 aa29.75■■■□□ 2.35
HOMER3-202ENST00000392351 ALDH1A1P00352 501 aa29.74■■■□□ 2.35
HOMER3-202ENST00000392351 HOXA7P31268 230 aaPredicted RBP29.74■■■□□ 2.35
HOMER3-202ENST00000392351 LIFRP42702 1097 aa29.74■■■□□ 2.35
HOMER3-202ENST00000392351 GMCL1Q96IK5 515 aa29.74■■■□□ 2.35
HOMER3-202ENST00000392351 USP17L15C9J2P7 530 aa29.73■■■□□ 2.35
HOMER3-202ENST00000392351 USP17L13C9JLJ4 530 aa29.73■■■□□ 2.35
HOMER3-202ENST00000392351 USP17L11C9JVI0 530 aa29.73■■■□□ 2.35
HOMER3-202ENST00000392351 USP17L18D6R9N7 530 aa29.73■■■□□ 2.35
HOMER3-202ENST00000392351 USP17L22D6RA61 530 aa29.73■■■□□ 2.35
HOMER3-202ENST00000392351 USP17L17D6RBQ6 530 aa29.73■■■□□ 2.35
HOMER3-202ENST00000392351 USP17L19D6RCP7 530 aa29.73■■■□□ 2.35
HOMER3-202ENST00000392351 USP17L20D6RJB6 530 aa29.73■■■□□ 2.35
HOMER3-202ENST00000392351 SLC1A4P43007 532 aa29.73■■■□□ 2.35
HOMER3-202ENST00000392351 USP17L24Q0WX57 530 aa29.73■■■□□ 2.35
HOMER3-202ENST00000392351 TAF1CQ15572 869 aaPredicted RBP29.73■■■□□ 2.35
HOMER3-202ENST00000392351 NFXL1Q6ZNB6 911 aa29.73■■■□□ 2.35
HOMER3-202ENST00000392351 JMYQ8N9B5 988 aa29.73■■■□□ 2.35
HOMER3-202ENST00000392351 TBC1D32Q96NH3 1257 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms