RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 NBPF20Q3BBV1 942 aa16.49■□□□□ 0.23
VPS9D1-201ENST00000389386 ANKRD18AQ8IVF6 992 aa16.49■□□□□ 0.23
VPS9D1-201ENST00000389386 AENQ8WTP8 325 aaKnown RBP16.49■□□□□ 0.23
VPS9D1-201ENST00000389386 RPGRIP1Q96KN7 1286 aa16.49■□□□□ 0.23
VPS9D1-201ENST00000389386 SHANK3Q9BYB0 1731 aa16.49■□□□□ 0.23
VPS9D1-201ENST00000389386 KLF18A0A0U1RQI7 1052 aa16.49■□□□□ 0.23
VPS9D1-201ENST00000389386 GOLGA8BA8MQT2 603 aa16.49■□□□□ 0.23
VPS9D1-201ENST00000389386 SMTNP53814 917 aa16.49■□□□□ 0.23
VPS9D1-201ENST00000389386 YTHDF3Q7Z739 585 aaKnown RBP16.49■□□□□ 0.23
VPS9D1-201ENST00000389386 TRIML1Q8N9V2 468 aa16.49■□□□□ 0.23
VPS9D1-201ENST00000389386 ACSBG1Q96GR2 724 aa16.49■□□□□ 0.23
VPS9D1-201ENST00000389386 ZMYM6O95789 1325 aa16.49■□□□□ 0.23
VPS9D1-201ENST00000389386 EP400Q96L91 3159 aa16.48■□□□□ 0.23
VPS9D1-201ENST00000389386 A6NNZ2 444 aa16.48■□□□□ 0.23
VPS9D1-201ENST00000389386 ENC1O14682 589 aa16.48■□□□□ 0.23
VPS9D1-201ENST00000389386 CPLX1O14810 134 aa16.48■□□□□ 0.23
VPS9D1-201ENST00000389386 MRPL12P52815 198 aaKnown RBP16.48■□□□□ 0.23
VPS9D1-201ENST00000389386 CASP7P55210 303 aa16.48■□□□□ 0.23
VPS9D1-201ENST00000389386 TUBB8Q3ZCM7 444 aa16.48■□□□□ 0.23
VPS9D1-201ENST00000389386 MEX3CQ5U5Q3 659 aaKnown RBP16.48■□□□□ 0.23
VPS9D1-201ENST00000389386 SLF1Q9BQI6 1058 aa16.48■□□□□ 0.23
VPS9D1-201ENST00000389386 SAR1BQ9Y6B6 198 aa16.48■□□□□ 0.23
VPS9D1-201ENST00000389386 TMCO5BA8MYB1 307 aa16.48■□□□□ 0.23
VPS9D1-201ENST00000389386 RASSF9O75901 435 aa16.48■□□□□ 0.23
VPS9D1-201ENST00000389386 DDB1Q16531 1140 aa16.48■□□□□ 0.23
VPS9D1-201ENST00000389386 TTC39AQ5SRH9 613 aa16.48■□□□□ 0.23
VPS9D1-201ENST00000389386 RAB11FIP4Q86YS3 637 aa16.48■□□□□ 0.23
VPS9D1-201ENST00000389386 TEX11Q8IYF3 940 aa16.48■□□□□ 0.23
VPS9D1-201ENST00000389386 NEUROD6Q96NK8 337 aa16.48■□□□□ 0.23
VPS9D1-201ENST00000389386 AIFM3Q96NN9 605 aa16.48■□□□□ 0.23
VPS9D1-201ENST00000389386 PAGR1Q9BTK6 254 aa16.48■□□□□ 0.23
VPS9D1-201ENST00000389386 COPRSQ9NQ92 184 aa16.48■□□□□ 0.23
VPS9D1-201ENST00000389386 TMOD3Q9NYL9 352 aa16.48■□□□□ 0.23
VPS9D1-201ENST00000389386 TRIM10Q9UDY6 481 aa16.48■□□□□ 0.23
VPS9D1-201ENST00000389386 FAM184BQ9ULE4 1060 aa16.48■□□□□ 0.23
VPS9D1-201ENST00000389386 ARFGEF2Q9Y6D5 1785 aa16.48■□□□□ 0.23
VPS9D1-201ENST00000389386 ERVV-2B6SEH9 535 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 SRGAP2O75044 1071 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 PAX7P23759 505 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 NKX1-1Q15270 411 aaPredicted RBP16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 SPECC1Q5M775 1068 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 SPATA1Q5VX52 437 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 PAPD7Q5XG87 772 aaKnown RBP16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 CYP26C1Q6V0L0 522 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 IQCA1Q86XH1 822 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 SGSM3Q96HU1 749 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 ATP1A1P05023 1023 aaKnown RBP16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 EPB41P11171 864 aaKnown RBP16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 TIMM10P62072 90 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 C11orf91Q3C1V1 193 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 PIGBQ92521 554 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 GUCA1BQ9UMX6 200 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 REXO2Q9Y3B8 237 aaKnown RBP16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 MAP3K15Q6ZN16 1313 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 RNF225M0QZC1 329 aaPredicted RBP16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 KIF3CO14782 793 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 OPA1O60313 960 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 LRP6O75581 1613 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 GLI3P10071 1580 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 ERCC3P19447 782 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 FOXO4P98177 505 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 ACTN3Q08043 901 aaPredicted RBP16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 PDCLQ13371 301 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 SPATA31A5Q5VU36 1347 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 CDKAL1Q5VV42 579 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 ITIH6Q6UXX5 1313 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 SPATA31A7Q8IWB4 1347 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 DNAJC10Q8IXB1 793 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 VCPKMTQ9H867 229 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 ABHD10Q9NUJ1 306 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 SERTAD1Q9UHV2 236 aa16.47■□□□□ 0.23
VPS9D1-201ENST00000389386 DISP2A7MBM2 1401 aa16.46■□□□□ 0.23
VPS9D1-201ENST00000389386 PALLDQ8WX93 1383 aa16.46■□□□□ 0.23
VPS9D1-201ENST00000389386 TULP1O00294 542 aaPredicted RBP16.46■□□□□ 0.23
VPS9D1-201ENST00000389386 NEBLO76041 1014 aa16.46■□□□□ 0.23
VPS9D1-201ENST00000389386 CKAP4Q07065 602 aaKnown RBP16.46■□□□□ 0.23
VPS9D1-201ENST00000389386 CRYMQ14894 314 aa16.46■□□□□ 0.23
VPS9D1-201ENST00000389386 CCDC40Q4G0X9 1142 aa16.46■□□□□ 0.23
VPS9D1-201ENST00000389386 LRRC24Q50LG9 513 aa16.46■□□□□ 0.23
VPS9D1-201ENST00000389386 ZMYM1Q5SVZ6 1142 aa16.46■□□□□ 0.23
VPS9D1-201ENST00000389386 FAM182BQ5T319 152 aa16.46■□□□□ 0.23
VPS9D1-201ENST00000389386 KRT40Q6A162 431 aa16.46■□□□□ 0.23
VPS9D1-201ENST00000389386 GRAMD1CQ8IYS0 662 aa16.46■□□□□ 0.23
VPS9D1-201ENST00000389386 KRI1Q8N9T8 703 aaKnown RBP16.46■□□□□ 0.23
VPS9D1-201ENST00000389386 CAPZA3Q96KX2 299 aa16.46■□□□□ 0.23
VPS9D1-201ENST00000389386 CTAGE1Q96RT6 745 aa16.46■□□□□ 0.23
VPS9D1-201ENST00000389386 SEC31BQ9NQW1 1179 aa16.46■□□□□ 0.23
VPS9D1-201ENST00000389386 CWC25Q9NXE8 425 aaPredicted RBP16.46■□□□□ 0.23
VPS9D1-201ENST00000389386 MYH8P13535 1937 aa16.46■□□□□ 0.23
VPS9D1-201ENST00000389386 NAP1L1P55209 391 aaKnown RBP16.46■□□□□ 0.22
VPS9D1-201ENST00000389386 ATP2B2Q01814 1243 aa16.46■□□□□ 0.22
VPS9D1-201ENST00000389386 MAP2K1Q02750 393 aaPredicted RBP16.46■□□□□ 0.22
VPS9D1-201ENST00000389386 RABL6Q3YEC7 729 aaPredicted RBP16.46■□□□□ 0.22
VPS9D1-201ENST00000389386 MICALCLQ6ZW33 695 aa16.46■□□□□ 0.22
VPS9D1-201ENST00000389386 SND1Q7KZF4 910 aaKnown RBP eCLIP16.46■□□□□ 0.22
VPS9D1-201ENST00000389386 SYNE4Q8N205 404 aa16.46■□□□□ 0.22
VPS9D1-201ENST00000389386 SPATA20Q8TB22 786 aa16.46■□□□□ 0.22
VPS9D1-201ENST00000389386 ARL8AQ96BM9 186 aa16.46■□□□□ 0.22
VPS9D1-201ENST00000389386 ALG1Q9BT22 464 aa16.46■□□□□ 0.22
VPS9D1-201ENST00000389386 USP21Q9UK80 565 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms