RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 SHISA3A0PJX4 238 aa4.87□□□□□ -1.63
RNU6-1040P-201ENST00000383974 FITM1A5D6W6 292 aa4.87□□□□□ -1.63
RNU6-1040P-201ENST00000383974 GRIN3BO60391 1043 aa4.87□□□□□ -1.63
RNU6-1040P-201ENST00000383974 PF4P02776 101 aa4.87□□□□□ -1.63
RNU6-1040P-201ENST00000383974 TNNI2P48788 182 aa4.87□□□□□ -1.63
RNU6-1040P-201ENST00000383974 LINC00310P59036 64 aa4.87□□□□□ -1.63
RNU6-1040P-201ENST00000383974 DIEXFQ68CQ4 756 aaKnown RBP4.87□□□□□ -1.63
RNU6-1040P-201ENST00000383974 LILRA6Q6PI73 481 aa4.87□□□□□ -1.63
RNU6-1040P-201ENST00000383974 TMC4Q7Z404 712 aa4.87□□□□□ -1.63
RNU6-1040P-201ENST00000383974 LILRA2Q8N149 483 aa4.87□□□□□ -1.63
RNU6-1040P-201ENST00000383974 BAHD1Q8TBE0 780 aaPredicted RBP4.87□□□□□ -1.63
RNU6-1040P-201ENST00000383974 KREMEN1Q96MU8 473 aa4.87□□□□□ -1.63
RNU6-1040P-201ENST00000383974 KRTAP4-2Q9BYR5 136 aa4.87□□□□□ -1.63
RNU6-1040P-201ENST00000383974 SMG5Q9UPR3 1016 aaKnown RBP4.87□□□□□ -1.63
RNU6-1040P-201ENST00000383974 POLR3KQ9Y2Y1 108 aaPredicted RBP4.87□□□□□ -1.63
RNU6-1040P-201ENST00000383974 PRR36Q9H6K5 1346 aa4.87□□□□□ -1.63
RNU6-1040P-201ENST00000383974 DNAJA2O60884 412 aa4.86□□□□□ -1.63
RNU6-1040P-201ENST00000383974 HTR3BO95264 441 aa4.86□□□□□ -1.63
RNU6-1040P-201ENST00000383974 XPCQ01831 940 aaPredicted RBP4.86□□□□□ -1.63
RNU6-1040P-201ENST00000383974 DNAJC14Q6Y2X3 702 aaPredicted RBP4.86□□□□□ -1.63
RNU6-1040P-201ENST00000383974 AMIGO3Q86WK7 504 aa4.86□□□□□ -1.63
RNU6-1040P-201ENST00000383974 IRF2BP1Q8IU81 584 aa4.86□□□□□ -1.63
RNU6-1040P-201ENST00000383974 OXR1Q8N573 874 aa4.86□□□□□ -1.63
RNU6-1040P-201ENST00000383974 KCNN1Q92952 543 aa4.86□□□□□ -1.63
RNU6-1040P-201ENST00000383974 ASPNQ9BXN1 380 aa4.86□□□□□ -1.63
RNU6-1040P-201ENST00000383974 MCOLN1Q9GZU1 580 aa4.86□□□□□ -1.63
RNU6-1040P-201ENST00000383974 SLC6A17Q9H1V8 727 aa4.86□□□□□ -1.63
RNU6-1040P-201ENST00000383974 EBF1Q9UH73 591 aa4.86□□□□□ -1.63
RNU6-1040P-201ENST00000383974 RBM47A0AV96 593 aaKnown RBP4.85□□□□□ -1.63
RNU6-1040P-201ENST00000383974 CHURC1-FNTBB4DL54 471 aa4.85□□□□□ -1.63
RNU6-1040P-201ENST00000383974 NUAK1O60285 661 aa4.85□□□□□ -1.63
RNU6-1040P-201ENST00000383974 TEKQ02763 1124 aa4.85□□□□□ -1.63
RNU6-1040P-201ENST00000383974 FAM160A1Q05DH4 1040 aa4.85□□□□□ -1.63
RNU6-1040P-201ENST00000383974 NR0B2Q15466 257 aa4.85□□□□□ -1.63
RNU6-1040P-201ENST00000383974 TTLL10Q6ZVT0 673 aa4.85□□□□□ -1.63
RNU6-1040P-201ENST00000383974 ZNF605Q86T29 641 aa4.85□□□□□ -1.63
RNU6-1040P-201ENST00000383974 DHX38Q92620 1227 aaKnown RBP4.85□□□□□ -1.63
RNU6-1040P-201ENST00000383974 SYTL4Q96C24 671 aaPredicted RBP4.85□□□□□ -1.63
RNU6-1040P-201ENST00000383974 INTS4Q96HW7 963 aaKnown RBP4.85□□□□□ -1.63
RNU6-1040P-201ENST00000383974 CCDC74BQ96LY2 380 aa4.85□□□□□ -1.63
RNU6-1040P-201ENST00000383974 TMEM74Q96NL1 305 aa4.85□□□□□ -1.63
RNU6-1040P-201ENST00000383974 CWC22Q9HCG8 908 aaKnown RBP4.85□□□□□ -1.63
RNU6-1040P-201ENST00000383974 YBX2Q9Y2T7 364 aaKnown RBP4.85□□□□□ -1.63
RNU6-1040P-201ENST00000383974 MYOCOSA0A1B0GUC4 107 aa4.84□□□□□ -1.63
RNU6-1040P-201ENST00000383974 INHBBP09529 407 aa4.84□□□□□ -1.63
RNU6-1040P-201ENST00000383974 GBP2P32456 591 aaPredicted RBP4.84□□□□□ -1.63
RNU6-1040P-201ENST00000383974 GALK1P51570 392 aa4.84□□□□□ -1.63
RNU6-1040P-201ENST00000383974 CHRNEQ04844 493 aa4.84□□□□□ -1.63
RNU6-1040P-201ENST00000383974 DUSP4Q13115 394 aa4.84□□□□□ -1.63
RNU6-1040P-201ENST00000383974 FBXO33Q7Z6M2 555 aa4.84□□□□□ -1.63
RNU6-1040P-201ENST00000383974 PHACTR4Q8IZ21 702 aa4.84□□□□□ -1.63
RNU6-1040P-201ENST00000383974 FBXO27Q8NI29 283 aa4.84□□□□□ -1.63
RNU6-1040P-201ENST00000383974 KIF2CQ99661 725 aa4.84□□□□□ -1.63
RNU6-1040P-201ENST00000383974 GPR160Q9UJ42 338 aa4.84□□□□□ -1.63
RNU6-1040P-201ENST00000383974 PSPNO60542 156 aa4.83□□□□□ -1.64
RNU6-1040P-201ENST00000383974 DLG4P78352 724 aa4.83□□□□□ -1.64
RNU6-1040P-201ENST00000383974 MPP2Q14168 576 aa4.83□□□□□ -1.64
RNU6-1040P-201ENST00000383974 CLEC16AQ2KHT3 1053 aa4.83□□□□□ -1.64
RNU6-1040P-201ENST00000383974 SNAP47Q5SQN1 464 aa4.83□□□□□ -1.64
RNU6-1040P-201ENST00000383974 REC114Q7Z4M0 266 aa4.83□□□□□ -1.64
RNU6-1040P-201ENST00000383974 ANKS4BQ8N8V4 417 aa4.83□□□□□ -1.64
RNU6-1040P-201ENST00000383974 GOLM1Q8NBJ4 401 aa4.83□□□□□ -1.64
RNU6-1040P-201ENST00000383974 LINC01599Q8WXQ3 324 aa4.83□□□□□ -1.64
RNU6-1040P-201ENST00000383974 SHISA4Q96DD7 197 aa4.83□□□□□ -1.64
RNU6-1040P-201ENST00000383974 G6PC3Q9BUM1 346 aa4.83□□□□□ -1.64
RNU6-1040P-201ENST00000383974 IRF2BPLQ9H1B7 796 aa4.83□□□□□ -1.64
RNU6-1040P-201ENST00000383974 VTI1BQ9UEU0 232 aa4.83□□□□□ -1.64
RNU6-1040P-201ENST00000383974 RAPGEFL1Q9UHV5 662 aa4.83□□□□□ -1.64
RNU6-1040P-201ENST00000383974 NCANO14594 1321 aa4.82□□□□□ -1.64
RNU6-1040P-201ENST00000383974 MINDY4BA8MYZ0 360 aa4.82□□□□□ -1.64
RNU6-1040P-201ENST00000383974 SORBS3O60504 671 aa4.82□□□□□ -1.64
RNU6-1040P-201ENST00000383974 PEX10O60683 326 aa4.82□□□□□ -1.64
RNU6-1040P-201ENST00000383974 SEMA7AO75326 666 aa4.82□□□□□ -1.64
RNU6-1040P-201ENST00000383974 EFEMP2O95967 443 aa4.82□□□□□ -1.64
RNU6-1040P-201ENST00000383974 PDE6BP35913 854 aa4.82□□□□□ -1.64
RNU6-1040P-201ENST00000383974 NMIQ13287 307 aaPredicted RBP4.82□□□□□ -1.64
RNU6-1040P-201ENST00000383974 PWP1Q13610 501 aa4.82□□□□□ -1.64
RNU6-1040P-201ENST00000383974 SPPL2CQ8IUH8 684 aa4.82□□□□□ -1.64
RNU6-1040P-201ENST00000383974 RELL1Q8IUW5 271 aa4.82□□□□□ -1.64
RNU6-1040P-201ENST00000383974 VWCEQ96DN2 955 aa4.82□□□□□ -1.64
RNU6-1040P-201ENST00000383974 RSRP1Q9BUV0 290 aa4.82□□□□□ -1.64
RNU6-1040P-201ENST00000383974 HDAC8Q9BY41 377 aa4.82□□□□□ -1.64
RNU6-1040P-201ENST00000383974 KRTAP4-11Q9BYQ6 195 aa4.82□□□□□ -1.64
RNU6-1040P-201ENST00000383974 MRS2Q9HD23 443 aa4.82□□□□□ -1.64
RNU6-1040P-201ENST00000383974 ZNF281Q9Y2X9 895 aa4.82□□□□□ -1.64
RNU6-1040P-201ENST00000383974 TEX51A0A1B0GUA7 166 aa4.81□□□□□ -1.64
RNU6-1040P-201ENST00000383974 NOTOA8MTQ0 251 aa4.81□□□□□ -1.64
RNU6-1040P-201ENST00000383974 USP2O75604 605 aaPredicted RBP4.81□□□□□ -1.64
RNU6-1040P-201ENST00000383974 UBOX5O94941 541 aa4.81□□□□□ -1.64
RNU6-1040P-201ENST00000383974 GARTP22102 1010 aa4.81□□□□□ -1.64
RNU6-1040P-201ENST00000383974 GBP1P32455 592 aa4.81□□□□□ -1.64
RNU6-1040P-201ENST00000383974 TAGLNQ01995 201 aaKnown RBP4.81□□□□□ -1.64
RNU6-1040P-201ENST00000383974 SNX17Q15036 470 aa4.81□□□□□ -1.64
RNU6-1040P-201ENST00000383974 FAM196AQ6ZSG2 479 aa4.81□□□□□ -1.64
RNU6-1040P-201ENST00000383974 AEBP1Q8IUX7 1158 aa4.81□□□□□ -1.64
RNU6-1040P-201ENST00000383974 SGPP1Q9BX95 441 aa4.81□□□□□ -1.64
RNU6-1040P-201ENST00000383974 ZNF552Q9H707 407 aaPredicted RBP4.81□□□□□ -1.64
RNU6-1040P-201ENST00000383974 GCM1Q9NP62 436 aa4.81□□□□□ -1.64
RNU6-1040P-201ENST00000383974 B8ZZF3 427 aa4.8□□□□□ -1.64
RNU6-1040P-201ENST00000383974 PRRG2O14669 202 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms