RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 NDUFAB1O14561 156 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 CPA1P15085 419 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 SLC8A1P32418 973 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 KRT83P78385 493 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 MAP7Q14244 749 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 ASIC2Q16515 512 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 MTERF2Q49AM1 385 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 ITPRIPL1Q6GPH6 555 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 ANKRD18AQ8IVF6 992 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 SIRT1Q96EB6 747 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 NUP88Q99567 741 aaPredicted RBP6.36□□□□□ -1.39
RFC1-202ENST00000381897 PSMA7O14818 248 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 KIF5BP33176 963 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 RFC5P40937 340 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 PPP1R15BQ5SWA1 713 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 FAM173BQ6P4H8 233 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.36□□□□□ -1.39
RFC1-202ENST00000381897 SSH3Q8TE77 659 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 HNRNPLLQ8WVV9 542 aaKnown RBP6.36□□□□□ -1.39
RFC1-202ENST00000381897 ALS2CR12Q96Q35 445 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 PHAXQ9H814 394 aaKnown RBP6.36□□□□□ -1.39
RFC1-202ENST00000381897 MIS18AQ9NYP9 233 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 CPSF2Q9P2I0 782 aaKnown RBP6.36□□□□□ -1.39
RFC1-202ENST00000381897 MYO3AQ8NEV4 1616 aa6.36□□□□□ -1.39
RFC1-202ENST00000381897 EDC4Q6P2E9 1401 aaKnown RBP6.35□□□□□ -1.39
RFC1-202ENST00000381897 KIF3CO14782 793 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 CLNS1AP54105 237 aaKnown RBP6.35□□□□□ -1.39
RFC1-202ENST00000381897 IFFO1Q0D2I5 559 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 IQCB1Q15051 598 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 SPA17Q15506 151 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 ZBTB33Q86T24 672 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 TMTC1Q8IUR5 882 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 CCDC33Q8N5R6 958 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 PLVAPQ9BX97 442 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 PPP1R12CQ9BZL4 782 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 LZTFL1Q9NQ48 299 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 RASAL2Q9UJF2 1139 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 ATP7AQ04656 1500 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 LRRC7Q96NW7 1537 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 ATP10DQ9P241 1426 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 ALDH1L1O75891 902 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 STRN3Q13033 797 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 TAF7Q15545 349 aaPredicted RBP6.35□□□□□ -1.39
RFC1-202ENST00000381897 MLKLQ8NB16 471 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 USP7Q93009 1102 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 CCDC114Q96M63 670 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 EIF2AK1Q9BQI3 630 aaKnown RBP6.35□□□□□ -1.39
RFC1-202ENST00000381897 CAPS2Q9BXY5 557 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 MOSPD1Q9UJG1 213 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 MRFAP1Q9Y605 127 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 PNPLA6Q8IY17 1366 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 PLEKHG2Q9H7P9 1386 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 CDK12Q9NYV4 1490 aaPredicted RBP6.35□□□□□ -1.39
RFC1-202ENST00000381897 SART1O43290 800 aaKnown RBP6.35□□□□□ -1.39
RFC1-202ENST00000381897 CRCPO75575 148 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 PDHA1P08559 390 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 APBA1Q02410 837 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 RESTQ13127 1097 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 ANGPT1Q15389 498 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 RILPL1Q5EBL4 403 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 DHX32Q7L7V1 743 aaKnown RBP6.35□□□□□ -1.39
RFC1-202ENST00000381897 VSTM4Q8IW00 320 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 BBOF1Q8ND07 529 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 LRRC27Q9C0I9 530 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 CSRNP2Q9H175 543 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 CNNM2Q9H8M5 875 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 VIPAS39Q9H9C1 493 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 CAPN7Q9Y6W3 813 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 AATKQ6ZMQ8 1374 aa6.35□□□□□ -1.39
RFC1-202ENST00000381897 A0A1B0GVL5 298 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 BPNT1O95861 308 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 CYLC1P35663 651 aaPredicted RBP6.34□□□□□ -1.39
RFC1-202ENST00000381897 LIG3P49916 1009 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 ST5P78524 1137 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 SATB1Q01826 763 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 KIF22Q14807 665 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 DHX40Q8IX18 779 aaKnown RBP6.34□□□□□ -1.39
RFC1-202ENST00000381897 RASEFQ8IZ41 740 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 KCNH5Q8NCM2 988 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 DONSONQ9NYP3 566 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 AKAP2Q9Y2D5 859 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 ERICH2A1L162 156 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 AP5Z1O43299 807 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 KRT86O43790 486 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 ZNF202O95125 648 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 ESRRAP11474 423 aaPredicted RBP6.34□□□□□ -1.39
RFC1-202ENST00000381897 ADCY1Q08828 1119 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 IKQ13123 557 aaPredicted RBP6.34□□□□□ -1.39
RFC1-202ENST00000381897 CASP8Q14790 479 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 SEPT2Q15019 361 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 E4F1Q66K89 784 aaPredicted RBP6.34□□□□□ -1.39
RFC1-202ENST00000381897 CYP26C1Q6V0L0 522 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 WDR66Q8TBY9 1149 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 RAPGEF4Q8WZA2 1011 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 TSGA10Q9BZW7 698 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 BOLA2Q9H3K6 86 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 BICC1Q9H694 974 aaKnown RBP6.34□□□□□ -1.39
RFC1-202ENST00000381897 PNMA6EA0A0J9YXQ4 647 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 RPS6KA5O75582 802 aa6.34□□□□□ -1.39
RFC1-202ENST00000381897 CTNNA1P35221 906 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 195.1 ms