RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 TOP1P11387 765 aaKnown RBP18.19■□□□□ 0.5
PDGFB-202ENST00000381551 CPA1P15085 419 aa18.19■□□□□ 0.5
PDGFB-202ENST00000381551 TM4SF4P48230 202 aa18.19■□□□□ 0.5
PDGFB-202ENST00000381551 HMGCS2P54868 508 aa18.19■□□□□ 0.5
PDGFB-202ENST00000381551 DGKZQ13574 1117 aa18.19■□□□□ 0.5
PDGFB-202ENST00000381551 USP17L2Q6R6M4 530 aa18.19■□□□□ 0.5
PDGFB-202ENST00000381551 FASTKD5Q7L8L6 764 aaKnown RBP18.19■□□□□ 0.5
PDGFB-202ENST00000381551 BRI3BPQ8WY22 251 aa18.19■□□□□ 0.5
PDGFB-202ENST00000381551 FEZ1Q99689 392 aa18.19■□□□□ 0.5
PDGFB-202ENST00000381551 PTPN18Q99952 460 aa18.19■□□□□ 0.5
PDGFB-202ENST00000381551 SH2D4AQ9H788 454 aa18.19■□□□□ 0.5
PDGFB-202ENST00000381551 WDR19Q8NEZ3 1342 aa18.19■□□□□ 0.5
PDGFB-202ENST00000381551 CCL15-CCL14A0A0B4J2E2 113 aa18.18■□□□□ 0.5
PDGFB-202ENST00000381551 F5H6K3 240 aa18.18■□□□□ 0.5
PDGFB-202ENST00000381551 CASTP20810 708 aaKnown RBP18.18■□□□□ 0.5
PDGFB-202ENST00000381551 KLRC3Q07444 240 aa18.18■□□□□ 0.5
PDGFB-202ENST00000381551 SART3Q15020 963 aaKnown RBP18.18■□□□□ 0.5
PDGFB-202ENST00000381551 CCL15Q16663 113 aa18.18■□□□□ 0.5
PDGFB-202ENST00000381551 KIAA1755Q5JYT7 1200 aa18.18■□□□□ 0.5
PDGFB-202ENST00000381551 BLOC1S2Q6QNY1 142 aa18.18■□□□□ 0.5
PDGFB-202ENST00000381551 RUFY3Q7L099 469 aa18.18■□□□□ 0.5
PDGFB-202ENST00000381551 REM2Q8IYK8 340 aaPredicted RBP18.18■□□□□ 0.5
PDGFB-202ENST00000381551 TMEM87BQ96K49 555 aa18.18■□□□□ 0.5
PDGFB-202ENST00000381551 C12orf42Q96LP6 360 aa18.18■□□□□ 0.5
PDGFB-202ENST00000381551 VCPKMTQ9H867 229 aa18.18■□□□□ 0.5
PDGFB-202ENST00000381551 ERICH2A1L162 156 aa18.17■□□□□ 0.5
PDGFB-202ENST00000381551 RPS6KB1P23443 525 aa18.17■□□□□ 0.5
PDGFB-202ENST00000381551 ZYXQ15942 572 aaKnown RBP18.17■□□□□ 0.5
PDGFB-202ENST00000381551 TMEM67Q5HYA8 995 aa18.17■□□□□ 0.5
PDGFB-202ENST00000381551 GPAT2Q6NUI2 795 aa18.17■□□□□ 0.5
PDGFB-202ENST00000381551 LRRC47Q8N1G4 583 aaKnown RBP18.17■□□□□ 0.5
PDGFB-202ENST00000381551 PROCA1Q8NCQ7 364 aaPredicted RBP18.17■□□□□ 0.5
PDGFB-202ENST00000381551 KIF2CQ99661 725 aa18.17■□□□□ 0.5
PDGFB-202ENST00000381551 SENP2Q9HC62 589 aa18.17■□□□□ 0.5
PDGFB-202ENST00000381551 GOPCQ9HD26 462 aa18.17■□□□□ 0.5
PDGFB-202ENST00000381551 GPHNQ9NQX3 736 aaPredicted RBP18.17■□□□□ 0.5
PDGFB-202ENST00000381551 TMOD4Q9NZQ9 345 aa18.17■□□□□ 0.5
PDGFB-202ENST00000381551 CYP46A1Q9Y6A2 500 aa18.17■□□□□ 0.5
PDGFB-202ENST00000381551 SH2B2O14492 632 aaPredicted RBP18.16■□□□□ 0.5
PDGFB-202ENST00000381551 LIFRP42702 1097 aa18.16■□□□□ 0.5
PDGFB-202ENST00000381551 SREBF2Q12772 1141 aa18.16■□□□□ 0.5
PDGFB-202ENST00000381551 WTAPQ15007 396 aa18.16■□□□□ 0.5
PDGFB-202ENST00000381551 IFIT1BQ5T764 474 aaKnown RBP18.16■□□□□ 0.5
PDGFB-202ENST00000381551 GADL1Q6ZQY3 521 aa18.16■□□□□ 0.5
PDGFB-202ENST00000381551 GMCL1P1Q8NEA9 526 aa18.16■□□□□ 0.5
PDGFB-202ENST00000381551 LPAR1Q92633 364 aa18.16■□□□□ 0.5
PDGFB-202ENST00000381551 TCEANC2Q96MN5 208 aa18.16■□□□□ 0.5
PDGFB-202ENST00000381551 LRRC2Q9BYS8 371 aa18.16■□□□□ 0.5
PDGFB-202ENST00000381551 LY9Q9HBG7 655 aa18.16■□□□□ 0.5
PDGFB-202ENST00000381551 BTBD19C9JJ37 291 aa18.15■□□□□ 0.5
PDGFB-202ENST00000381551 NDUFB10O96000 172 aa18.15■□□□□ 0.5
PDGFB-202ENST00000381551 TREML2Q5T2D2 321 aa18.15■□□□□ 0.5
PDGFB-202ENST00000381551 ANKRD23Q86SG2 305 aa18.15■□□□□ 0.5
PDGFB-202ENST00000381551 IFNL1Q8IU54 200 aa18.15■□□□□ 0.5
PDGFB-202ENST00000381551 SPICE1Q8N0Z3 855 aa18.15■□□□□ 0.5
PDGFB-202ENST00000381551 TMTC2Q8N394 836 aa18.15■□□□□ 0.5
PDGFB-202ENST00000381551 FBXL16Q8N461 479 aa18.15■□□□□ 0.5
PDGFB-202ENST00000381551 TBC1D32Q96NH3 1257 aa18.15■□□□□ 0.5
PDGFB-202ENST00000381551 UPF3BQ9BZI7 483 aaKnown RBP18.15■□□□□ 0.5
PDGFB-202ENST00000381551 PTPRFP10586 1907 aa18.15■□□□□ 0.5
PDGFB-202ENST00000381551 MYH4Q9Y623 1939 aa18.14■□□□□ 0.49
PDGFB-202ENST00000381551 IGF2BP3O00425 579 aaKnown RBP eCLIP18.14■□□□□ 0.49
PDGFB-202ENST00000381551 HOXA7P31268 230 aaPredicted RBP18.14■□□□□ 0.49
PDGFB-202ENST00000381551 SLFN13Q68D06 897 aa18.14■□□□□ 0.49
PDGFB-202ENST00000381551 Q6ZUG5 572 aa18.14■□□□□ 0.49
PDGFB-202ENST00000381551 FAM43AQ8N2R8 423 aa18.14■□□□□ 0.49
PDGFB-202ENST00000381551 PNMA1Q8ND90 353 aa18.14■□□□□ 0.49
PDGFB-202ENST00000381551 KAT14Q9H8E8 782 aa18.14■□□□□ 0.49
PDGFB-202ENST00000381551 AGTPBP1Q9UPW5 1226 aa18.14■□□□□ 0.49
PDGFB-202ENST00000381551 RAD21O60216 631 aa18.13■□□□□ 0.49
PDGFB-202ENST00000381551 VCAM1P19320 739 aa18.13■□□□□ 0.49
PDGFB-202ENST00000381551 OTUD7BQ6GQQ9 843 aa18.13■□□□□ 0.49
PDGFB-202ENST00000381551 SGMS1Q86VZ5 419 aa18.13■□□□□ 0.49
PDGFB-202ENST00000381551 GMCL1Q96IK5 515 aa18.13■□□□□ 0.49
PDGFB-202ENST00000381551 AGXT2Q9BYV1 514 aa18.13■□□□□ 0.49
PDGFB-202ENST00000381551 SLC45A1Q9Y2W3 748 aa18.13■□□□□ 0.49
PDGFB-202ENST00000381551 USP17L15C9J2P7 530 aa18.12■□□□□ 0.49
PDGFB-202ENST00000381551 USP17L13C9JLJ4 530 aa18.12■□□□□ 0.49
PDGFB-202ENST00000381551 USP17L11C9JVI0 530 aa18.12■□□□□ 0.49
PDGFB-202ENST00000381551 USP17L18D6R9N7 530 aa18.12■□□□□ 0.49
PDGFB-202ENST00000381551 USP17L22D6RA61 530 aa18.12■□□□□ 0.49
PDGFB-202ENST00000381551 USP17L17D6RBQ6 530 aa18.12■□□□□ 0.49
PDGFB-202ENST00000381551 USP17L19D6RCP7 530 aa18.12■□□□□ 0.49
PDGFB-202ENST00000381551 USP17L20D6RJB6 530 aa18.12■□□□□ 0.49
PDGFB-202ENST00000381551 PDHXO00330 501 aa18.12■□□□□ 0.49
PDGFB-202ENST00000381551 WDR46O15213 610 aaKnown RBP18.12■□□□□ 0.49
PDGFB-202ENST00000381551 USP17L24Q0WX57 530 aa18.12■□□□□ 0.49
PDGFB-202ENST00000381551 CATSPERGQ6ZRH7 1159 aa18.12■□□□□ 0.49
PDGFB-202ENST00000381551 NUP88Q99567 741 aaPredicted RBP18.12■□□□□ 0.49
PDGFB-202ENST00000381551 ALDH8A1Q9H2A2 487 aaPredicted RBP18.12■□□□□ 0.49
PDGFB-202ENST00000381551 RPAP3Q9H6T3 665 aaPredicted RBP18.12■□□□□ 0.49
PDGFB-202ENST00000381551 ZCCHC17Q9NP64 241 aaKnown RBP18.12■□□□□ 0.49
PDGFB-202ENST00000381551 PDRG1Q9NUG6 133 aa18.12■□□□□ 0.49
PDGFB-202ENST00000381551 SNHG28P0DPA3 235 aa18.11■□□□□ 0.49
PDGFB-202ENST00000381551 PDHBP11177 359 aa18.11■□□□□ 0.49
PDGFB-202ENST00000381551 FGD1P98174 961 aa18.11■□□□□ 0.49
PDGFB-202ENST00000381551 TROAPQ12815 778 aa18.11■□□□□ 0.49
PDGFB-202ENST00000381551 PABPC4Q13310 644 aaKnown RBP eCLIP18.11■□□□□ 0.49
PDGFB-202ENST00000381551 DCAF4Q8WV16 495 aa18.11■□□□□ 0.49
PDGFB-202ENST00000381551 CHMP4CQ96CF2 233 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms