RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 UPF2Q9HAU5 1272 aaKnown RBP9.28□□□□□ -0.92
FAM49A-201ENST00000381323 HOMER2Q9NSB8 354 aa9.28□□□□□ -0.92
FAM49A-201ENST00000381323 TTC41PQ6P2S7 1318 aa9.28□□□□□ -0.92
FAM49A-201ENST00000381323 CYP2D7A0A087X1C5 515 aa9.28□□□□□ -0.92
FAM49A-201ENST00000381323 ATN1P54259 1190 aaPredicted RBP9.28□□□□□ -0.92
FAM49A-201ENST00000381323 CHURC1Q8WUH1 139 aa9.28□□□□□ -0.92
FAM49A-201ENST00000381323 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.28□□□□□ -0.92
FAM49A-201ENST00000381323 CEP290O15078 2479 aa9.28□□□□□ -0.92
FAM49A-201ENST00000381323 WDR46O15213 610 aaKnown RBP9.28□□□□□ -0.92
FAM49A-201ENST00000381323 CAPN2P17655 700 aa9.28□□□□□ -0.92
FAM49A-201ENST00000381323 DCTPP1Q9H773 170 aa9.28□□□□□ -0.92
FAM49A-201ENST00000381323 ZMYND8Q9ULU4 1186 aaPredicted RBP9.28□□□□□ -0.92
FAM49A-201ENST00000381323 ERICH2A1L162 156 aa9.28□□□□□ -0.92
FAM49A-201ENST00000381323 AKR1B1P15121 316 aa9.28□□□□□ -0.92
FAM49A-201ENST00000381323 STAT3P40763 770 aa9.28□□□□□ -0.92
FAM49A-201ENST00000381323 MAP2K5Q13163 448 aa9.28□□□□□ -0.92
FAM49A-201ENST00000381323 EVI5LQ96CN4 794 aa9.28□□□□□ -0.92
FAM49A-201ENST00000381323 B4DLN1 442 aa9.27□□□□□ -0.93
FAM49A-201ENST00000381323 HIP1O00291 1037 aa9.27□□□□□ -0.93
FAM49A-201ENST00000381323 SLC25A27O95847 323 aa9.27□□□□□ -0.93
FAM49A-201ENST00000381323 MRPL12P52815 198 aaKnown RBP9.27□□□□□ -0.93
FAM49A-201ENST00000381323 RNF41Q9H4P4 317 aaPredicted RBP9.27□□□□□ -0.93
FAM49A-201ENST00000381323 VCPKMTQ9H867 229 aa9.27□□□□□ -0.93
FAM49A-201ENST00000381323 STRNO43815 780 aa9.27□□□□□ -0.93
FAM49A-201ENST00000381323 EEF2P13639 858 aaKnown RBP9.27□□□□□ -0.93
FAM49A-201ENST00000381323 HOXA7P31268 230 aaPredicted RBP9.27□□□□□ -0.93
FAM49A-201ENST00000381323 IRF5Q13568 498 aa9.27□□□□□ -0.93
FAM49A-201ENST00000381323 AAMPQ13685 434 aa9.27□□□□□ -0.93
FAM49A-201ENST00000381323 SH3D19Q5HYK7 790 aa9.27□□□□□ -0.93
FAM49A-201ENST00000381323 RUFY2Q8WXA3 655 aa9.27□□□□□ -0.93
FAM49A-201ENST00000381323 SLC15A5A6NIM6 579 aa9.27□□□□□ -0.93
FAM49A-201ENST00000381323 GJA8P48165 433 aa9.27□□□□□ -0.93
FAM49A-201ENST00000381323 SENP6Q9GZR1 1112 aaPredicted RBP9.27□□□□□ -0.93
FAM49A-201ENST00000381323 MROH8Q9H579 483 aa9.27□□□□□ -0.93
FAM49A-201ENST00000381323 ERCC3P19447 782 aa9.26□□□□□ -0.93
FAM49A-201ENST00000381323 FAM83BQ5T0W9 1011 aa9.26□□□□□ -0.93
FAM49A-201ENST00000381323 C11orf49Q9H6J7 331 aa9.26□□□□□ -0.93
FAM49A-201ENST00000381323 RARBP10826 455 aa9.26□□□□□ -0.93
FAM49A-201ENST00000381323 IRX6P78412 446 aaPredicted RBP9.26□□□□□ -0.93
FAM49A-201ENST00000381323 FGD1P98174 961 aa9.26□□□□□ -0.93
FAM49A-201ENST00000381323 TFAP4Q01664 338 aa9.26□□□□□ -0.93
FAM49A-201ENST00000381323 BRDTQ58F21 947 aaPredicted RBP9.26□□□□□ -0.93
FAM49A-201ENST00000381323 SLFN13Q68D06 897 aa9.26□□□□□ -0.93
FAM49A-201ENST00000381323 CATSPERGQ6ZRH7 1159 aa9.26□□□□□ -0.93
FAM49A-201ENST00000381323 IQCA1Q86XH1 822 aa9.26□□□□□ -0.93
FAM49A-201ENST00000381323 SLF1Q9BQI6 1058 aa9.26□□□□□ -0.93
FAM49A-201ENST00000381323 EMILIN3Q9NT22 766 aa9.26□□□□□ -0.93
FAM49A-201ENST00000381323 ATP11BQ9Y2G3 1177 aa9.26□□□□□ -0.93
FAM49A-201ENST00000381323 PATL2C9JE40 543 aaKnown RBP9.26□□□□□ -0.93
FAM49A-201ENST00000381323 ANO1Q5XXA6 986 aa9.26□□□□□ -0.93
FAM49A-201ENST00000381323 CASC1Q6TDU7 716 aa9.26□□□□□ -0.93
FAM49A-201ENST00000381323 NSMFQ6X4W1 530 aa9.26□□□□□ -0.93
FAM49A-201ENST00000381323 LRRC47Q8N1G4 583 aaKnown RBP9.26□□□□□ -0.93
FAM49A-201ENST00000381323 ATG4CQ96DT6 458 aa9.26□□□□□ -0.93
FAM49A-201ENST00000381323 SPATC1LQ9H0A9 340 aa9.26□□□□□ -0.93
FAM49A-201ENST00000381323 C12orf60Q5U649 245 aa9.26□□□□□ -0.93
FAM49A-201ENST00000381323 SNRNP48Q6IEG0 339 aaKnown RBP9.26□□□□□ -0.93
FAM49A-201ENST00000381323 RALYLQ86SE5 291 aaKnown RBP9.26□□□□□ -0.93
FAM49A-201ENST00000381323 RIOK1Q9BRS2 568 aaKnown RBP9.26□□□□□ -0.93
FAM49A-201ENST00000381323 GPHNQ9NQX3 736 aaPredicted RBP9.26□□□□□ -0.93
FAM49A-201ENST00000381323 FBXO40Q9UH90 709 aa9.26□□□□□ -0.93
FAM49A-201ENST00000381323 UBAC1Q9BSL1 405 aa9.25□□□□□ -0.93
FAM49A-201ENST00000381323 PUS7LQ9H0K6 701 aaKnown RBP9.25□□□□□ -0.93
FAM49A-201ENST00000381323 H0YGN5 161 aa9.25□□□□□ -0.93
FAM49A-201ENST00000381323 TTLL1O95922 423 aa9.25□□□□□ -0.93
FAM49A-201ENST00000381323 SHMT1P34896 483 aa9.25□□□□□ -0.93
FAM49A-201ENST00000381323 MFSD6Q6ZSS7 791 aa9.25□□□□□ -0.93
FAM49A-201ENST00000381323 RNF180Q86T96 592 aa9.25□□□□□ -0.93
FAM49A-201ENST00000381323 UBE2OQ9C0C9 1292 aaKnown RBP9.25□□□□□ -0.93
FAM49A-201ENST00000381323 SUPT16HQ9Y5B9 1047 aaKnown RBP9.25□□□□□ -0.93
FAM49A-201ENST00000381323 TMEM232C9JQI7 657 aa9.25□□□□□ -0.93
FAM49A-201ENST00000381323 ALAS1P13196 640 aa9.25□□□□□ -0.93
FAM49A-201ENST00000381323 CYP2C19P33261 490 aa9.25□□□□□ -0.93
FAM49A-201ENST00000381323 CLEC10AQ8IUN9 316 aa9.25□□□□□ -0.93
FAM49A-201ENST00000381323 ZNF384Q8TF68 577 aa9.25□□□□□ -0.93
FAM49A-201ENST00000381323 PORCNQ9H237 461 aa9.25□□□□□ -0.93
FAM49A-201ENST00000381323 MORF4L1Q9UBU8 362 aa9.25□□□□□ -0.93
FAM49A-201ENST00000381323 CTNNA3Q9UI47 895 aa9.25□□□□□ -0.93
FAM49A-201ENST00000381323 NAP1L2Q9ULW6 460 aaPredicted RBP9.25□□□□□ -0.93
FAM49A-201ENST00000381323 POTEB2H3BUK9 544 aa9.25□□□□□ -0.93
FAM49A-201ENST00000381323 ADORA2AP29274 412 aa9.25□□□□□ -0.93
FAM49A-201ENST00000381323 MAP3K10Q02779 954 aa9.25□□□□□ -0.93
FAM49A-201ENST00000381323 FAM47AQ5JRC9 791 aa9.25□□□□□ -0.93
FAM49A-201ENST00000381323 IFNL3Q8IZI9 196 aa9.25□□□□□ -0.93
FAM49A-201ENST00000381323 PRPF38AQ8NAV1 312 aaKnown RBP9.25□□□□□ -0.93
FAM49A-201ENST00000381323 TEX13BQ9BXU2 312 aa9.25□□□□□ -0.93
FAM49A-201ENST00000381323 BMP3P12645 472 aa9.24□□□□□ -0.93
FAM49A-201ENST00000381323 SART3Q15020 963 aaKnown RBP9.24□□□□□ -0.93
FAM49A-201ENST00000381323 CCDC174Q6PII3 467 aa9.24□□□□□ -0.93
FAM49A-201ENST00000381323 AP5M1Q9H0R1 490 aa9.24□□□□□ -0.93
FAM49A-201ENST00000381323 ZNF213O14771 459 aa9.24□□□□□ -0.93
FAM49A-201ENST00000381323 PTPREP23469 700 aa9.24□□□□□ -0.93
FAM49A-201ENST00000381323 HAND2P61296 217 aa9.24□□□□□ -0.93
FAM49A-201ENST00000381323 GIMAP6Q6P9H5 292 aa9.24□□□□□ -0.93
FAM49A-201ENST00000381323 SYN1P17600 705 aa9.24□□□□□ -0.93
FAM49A-201ENST00000381323 PPARAQ07869 468 aa9.24□□□□□ -0.93
FAM49A-201ENST00000381323 TATDN1Q6P1N9 297 aa9.24□□□□□ -0.93
FAM49A-201ENST00000381323 STRBPQ96SI9 672 aaKnown RBP9.24□□□□□ -0.93
FAM49A-201ENST00000381323 MOV10L1Q9BXT6 1211 aaKnown RBP9.24□□□□□ -0.93
FAM49A-201ENST00000381323 RBPJLQ9UBG7 517 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms