RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 RGS17Q9UGC6 210 aaPredicted RBP13.79□□□□□ -0.2
USP3-202ENST00000380324 FBXO2Q9UK22 296 aaPredicted RBP13.79□□□□□ -0.2
USP3-202ENST00000380324 WNT7AO00755 349 aa13.78□□□□□ -0.2
USP3-202ENST00000380324 CAVIN2O95810 425 aa13.78□□□□□ -0.2
USP3-202ENST00000380324 NLRP5P59047 1200 aa13.78□□□□□ -0.2
USP3-202ENST00000380324 GRM4Q14833 912 aa13.78□□□□□ -0.2
USP3-202ENST00000380324 SLC15A2Q16348 729 aa13.78□□□□□ -0.2
USP3-202ENST00000380324 TRIM5Q9C035 493 aa13.78□□□□□ -0.2
USP3-202ENST00000380324 MAD2L2Q9UI95 211 aa13.78□□□□□ -0.2
USP3-202ENST00000380324 KCNH3Q9ULD8 1083 aa13.78□□□□□ -0.2
USP3-202ENST00000380324 BECN2A8MW95 431 aa13.78□□□□□ -0.2
USP3-202ENST00000380324 IQCB1Q15051 598 aa13.78□□□□□ -0.2
USP3-202ENST00000380324 ISM2Q6H9L7 571 aa13.78□□□□□ -0.2
USP3-202ENST00000380324 CEP95Q96GE4 821 aa13.78□□□□□ -0.2
USP3-202ENST00000380324 CPVLQ9H3G5 476 aa13.78□□□□□ -0.2
USP3-202ENST00000380324 TCP11L1Q9NUJ3 509 aa13.78□□□□□ -0.2
USP3-202ENST00000380324 CEP131Q9UPN4 1083 aa13.78□□□□□ -0.2
USP3-202ENST00000380324 SUGT1Q9Y2Z0 365 aa13.78□□□□□ -0.2
USP3-202ENST00000380324 TRIM75PA6NK02 468 aa13.77□□□□□ -0.21
USP3-202ENST00000380324 ADAMTS3O15072 1205 aa13.77□□□□□ -0.21
USP3-202ENST00000380324 PTPREP23469 700 aa13.77□□□□□ -0.21
USP3-202ENST00000380324 NT5C2P49902 561 aa13.77□□□□□ -0.21
USP3-202ENST00000380324 CCDC178Q5BJE1 867 aa13.77□□□□□ -0.21
USP3-202ENST00000380324 KIAA0825Q8IV33 1275 aa13.77□□□□□ -0.21
USP3-202ENST00000380324 AOPEPQ8N6M6 819 aa13.77□□□□□ -0.21
USP3-202ENST00000380324 ANKS1AQ92625 1134 aa13.77□□□□□ -0.21
USP3-202ENST00000380324 TTC12Q9H892 705 aaPredicted RBP13.77□□□□□ -0.21
USP3-202ENST00000380324 PNOCQ13519 176 aa13.76□□□□□ -0.21
USP3-202ENST00000380324 PIK3AP1Q6ZUJ8 805 aa13.76□□□□□ -0.21
USP3-202ENST00000380324 CLEC10AQ8IUN9 316 aa13.76□□□□□ -0.21
USP3-202ENST00000380324 DHX40Q8IX18 779 aaKnown RBP13.76□□□□□ -0.21
USP3-202ENST00000380324 TEKT1Q969V4 418 aa13.76□□□□□ -0.21
USP3-202ENST00000380324 USP40Q9NVE5 1235 aa13.76□□□□□ -0.21
USP3-202ENST00000380324 STK32BQ9NY57 414 aa13.76□□□□□ -0.21
USP3-202ENST00000380324 CYTH3O43739 400 aa13.76□□□□□ -0.21
USP3-202ENST00000380324 SLC35G1Q2M3R5 365 aa13.76□□□□□ -0.21
USP3-202ENST00000380324 LONRF3Q496Y0 759 aa13.76□□□□□ -0.21
USP3-202ENST00000380324 PDILTQ8N807 584 aa13.76□□□□□ -0.21
USP3-202ENST00000380324 CNNM3Q8NE01 707 aa13.76□□□□□ -0.21
USP3-202ENST00000380324 NEDD1Q8NHV4 660 aa13.76□□□□□ -0.21
USP3-202ENST00000380324 TNFRSF25Q93038 417 aa13.76□□□□□ -0.21
USP3-202ENST00000380324 PDGFDQ9GZP0 370 aaPredicted RBP13.76□□□□□ -0.21
USP3-202ENST00000380324 NAT10Q9H0A0 1025 aaKnown RBP13.76□□□□□ -0.21
USP3-202ENST00000380324 ECE2O60344 883 aa13.75□□□□□ -0.21
USP3-202ENST00000380324 EIF6P56537 245 aaKnown RBP13.75□□□□□ -0.21
USP3-202ENST00000380324 STYK1Q6J9G0 422 aa13.75□□□□□ -0.21
USP3-202ENST00000380324 HEATR3Q7Z4Q2 680 aa13.75□□□□□ -0.21
USP3-202ENST00000380324 METTL16Q86W50 562 aaKnown RBP13.75□□□□□ -0.21
USP3-202ENST00000380324 RASGRP4Q8TDF6 673 aa13.75□□□□□ -0.21
USP3-202ENST00000380324 TIGD1Q96MW7 591 aa13.75□□□□□ -0.21
USP3-202ENST00000380324 CSRNP2Q9H175 543 aa13.75□□□□□ -0.21
USP3-202ENST00000380324 PCDHAC2Q9Y5I4 1007 aa13.75□□□□□ -0.21
USP3-202ENST00000380324 FAM237AA0A1B0GTK4 181 aa13.75□□□□□ -0.21
USP3-202ENST00000380324 CACNB3P54284 484 aa13.75□□□□□ -0.21
USP3-202ENST00000380324 NFIAQ12857 509 aa13.75□□□□□ -0.21
USP3-202ENST00000380324 ZNF174Q15697 407 aa13.75□□□□□ -0.21
USP3-202ENST00000380324 AOC3Q16853 763 aa13.75□□□□□ -0.21
USP3-202ENST00000380324 TTC38Q5R3I4 469 aa13.75□□□□□ -0.21
USP3-202ENST00000380324 TYW1BQ6NUM6 668 aa13.75□□□□□ -0.21
USP3-202ENST00000380324 CDC42EP5Q6NZY7 148 aa13.75□□□□□ -0.21
USP3-202ENST00000380324 USP17L2Q6R6M4 530 aa13.75□□□□□ -0.21
USP3-202ENST00000380324 KRBA2Q6ZNG9 492 aa13.75□□□□□ -0.21
USP3-202ENST00000380324 USP49Q70CQ1 688 aa13.75□□□□□ -0.21
USP3-202ENST00000380324 PODNQ7Z5L7 613 aa13.75□□□□□ -0.21
USP3-202ENST00000380324 DRC7Q8IY82 874 aa13.75□□□□□ -0.21
USP3-202ENST00000380324 CAMKK2Q96RR4 588 aa13.75□□□□□ -0.21
USP3-202ENST00000380324 FAM13BQ9NYF5 915 aa13.75□□□□□ -0.21
USP3-202ENST00000380324 ZNF646O15015 1829 aaPredicted RBP13.75□□□□□ -0.21
USP3-202ENST00000380324 KLRF2D3W0D1 207 aa13.74□□□□□ -0.21
USP3-202ENST00000380324 FOXN1O15353 648 aa13.74□□□□□ -0.21
USP3-202ENST00000380324 POLR2DO15514 142 aaKnown RBP13.74□□□□□ -0.21
USP3-202ENST00000380324 CRKP46108 304 aa13.74□□□□□ -0.21
USP3-202ENST00000380324 GNAQP50148 359 aa13.74□□□□□ -0.21
USP3-202ENST00000380324 ZNF75DP51815 510 aa13.74□□□□□ -0.21
USP3-202ENST00000380324 RBM5P52756 815 aaKnown RBP eCLIP13.74□□□□□ -0.21
USP3-202ENST00000380324 WWC2Q6AWC2 1192 aa13.74□□□□□ -0.21
USP3-202ENST00000380324 HOMER1Q86YM7 354 aa13.74□□□□□ -0.21
USP3-202ENST00000380324 LRRC47Q8N1G4 583 aaKnown RBP13.74□□□□□ -0.21
USP3-202ENST00000380324 SRPRBQ9Y5M8 271 aaKnown RBP13.74□□□□□ -0.21
USP3-202ENST00000380324 PARP1P09874 1014 aaKnown RBP13.74□□□□□ -0.21
USP3-202ENST00000380324 SLURP2P0DP57 97 aa13.74□□□□□ -0.21
USP3-202ENST00000380324 AKR1B1P15121 316 aa13.74□□□□□ -0.21
USP3-202ENST00000380324 APOBEC3HQ6NTF7 200 aaKnown RBP13.74□□□□□ -0.21
USP3-202ENST00000380324 PLA2G4DQ86XP0 818 aa13.74□□□□□ -0.21
USP3-202ENST00000380324 OSBPL5Q9H0X9 879 aaPredicted RBP13.74□□□□□ -0.21
USP3-202ENST00000380324 SERPINB13Q9UIV8 391 aa13.74□□□□□ -0.21
USP3-202ENST00000380324 MYH4Q9Y623 1939 aa13.73□□□□□ -0.21
USP3-202ENST00000380324 PALM3A6NDB9 673 aaPredicted RBP13.73□□□□□ -0.21
USP3-202ENST00000380324 TOP1P11387 765 aaKnown RBP13.73□□□□□ -0.21
USP3-202ENST00000380324 MCM7P33993 719 aa13.73□□□□□ -0.21
USP3-202ENST00000380324 UTRNP46939 3433 aa13.73□□□□□ -0.21
USP3-202ENST00000380324 GOLGA6L6A8MZA4 724 aa13.73□□□□□ -0.21
USP3-202ENST00000380324 CALML3P27482 149 aa13.73□□□□□ -0.21
USP3-202ENST00000380324 NLRP12P59046 1061 aa13.73□□□□□ -0.21
USP3-202ENST00000380324 GABPAQ06546 454 aa13.73□□□□□ -0.21
USP3-202ENST00000380324 TCP10Q12799 353 aa13.73□□□□□ -0.21
USP3-202ENST00000380324 HHIPL2Q6UWX4 724 aa13.73□□□□□ -0.21
USP3-202ENST00000380324 BLIDQ8IZY5 108 aa13.73□□□□□ -0.21
USP3-202ENST00000380324 CNKSR1Q969H4 720 aa13.73□□□□□ -0.21
USP3-202ENST00000380324 FRMPD2Q68DX3 1309 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms