RNA–Protein interactions for RNA: ENST00000379600.7

NHLRC3-202, Transcript of NHL repeat containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC3, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-202ENST00000379600 ADAMTS3O15072 1205 aa10.61□□□□□ -0.71
NHLRC3-202ENST00000379600 MFSD6Q6ZSS7 791 aa10.61□□□□□ -0.71
NHLRC3-202ENST00000379600 CNGA4Q8IV77 575 aa10.61□□□□□ -0.71
NHLRC3-202ENST00000379600 ZNF654Q8IZM8 581 aa10.61□□□□□ -0.71
NHLRC3-202ENST00000379600 SPATA5Q8NB90 893 aa10.61□□□□□ -0.71
NHLRC3-202ENST00000379600 TNFRSF25Q93038 417 aa10.61□□□□□ -0.71
NHLRC3-202ENST00000379600 GSDMAQ96QA5 445 aa10.61□□□□□ -0.71
NHLRC3-202ENST00000379600 PHF20Q9BVI0 1012 aa10.61□□□□□ -0.71
NHLRC3-202ENST00000379600 RSPH14Q9UHP6 348 aa10.61□□□□□ -0.71
NHLRC3-202ENST00000379600 TTF2Q9UNY4 1162 aaKnown RBP10.61□□□□□ -0.71
NHLRC3-202ENST00000379600 SYF2O95926 243 aaKnown RBP10.6□□□□□ -0.71
NHLRC3-202ENST00000379600 SEC23AQ15436 765 aa10.6□□□□□ -0.71
NHLRC3-202ENST00000379600 IL17AQ16552 155 aa10.6□□□□□ -0.71
NHLRC3-202ENST00000379600 WHAMMP3Q1A5X7 153 aa10.6□□□□□ -0.71
NHLRC3-202ENST00000379600 LRRC31Q6UY01 552 aa10.6□□□□□ -0.71
NHLRC3-202ENST00000379600 SLF1Q9BQI6 1058 aa10.6□□□□□ -0.71
NHLRC3-202ENST00000379600 KRT23Q9C075 422 aa10.6□□□□□ -0.71
NHLRC3-202ENST00000379600 BLZF1Q9H2G9 400 aa10.6□□□□□ -0.71
NHLRC3-202ENST00000379600 CNNM2Q9H8M5 875 aa10.6□□□□□ -0.71
NHLRC3-202ENST00000379600 HDAC6Q9UBN7 1215 aa10.6□□□□□ -0.71
NHLRC3-202ENST00000379600 NUP98P52948 1817 aa10.6□□□□□ -0.71
NHLRC3-202ENST00000379600 COL22A1Q8NFW1 1626 aaPredicted RBP10.6□□□□□ -0.71
NHLRC3-202ENST00000379600 PHACTR2O75167 634 aa10.6□□□□□ -0.71
NHLRC3-202ENST00000379600 NOP2P46087 812 aaKnown RBP10.6□□□□□ -0.71
NHLRC3-202ENST00000379600 TUBB2AQ13885 445 aa10.6□□□□□ -0.71
NHLRC3-202ENST00000379600 WDR93Q6P2C0 686 aa10.6□□□□□ -0.71
NHLRC3-202ENST00000379600 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.6□□□□□ -0.71
NHLRC3-202ENST00000379600 DNAJC10Q8IXB1 793 aa10.6□□□□□ -0.71
NHLRC3-202ENST00000379600 CCDC51Q96ER9 411 aa10.6□□□□□ -0.71
NHLRC3-202ENST00000379600 TUBB2BQ9BVA1 445 aa10.6□□□□□ -0.71
NHLRC3-202ENST00000379600 STRCP1A6NGW2 1772 aa10.6□□□□□ -0.71
NHLRC3-202ENST00000379600 ANKRD18BA2A2Z9 1011 aa10.59□□□□□ -0.71
NHLRC3-202ENST00000379600 CTAGE15A4D2H0 777 aa10.59□□□□□ -0.71
NHLRC3-202ENST00000379600 TRIM75PA6NK02 468 aa10.59□□□□□ -0.71
NHLRC3-202ENST00000379600 CTAGE8P0CG41 777 aa10.59□□□□□ -0.71
NHLRC3-202ENST00000379600 GIGYF2Q6Y7W6 1299 aaKnown RBP10.59□□□□□ -0.71
NHLRC3-202ENST00000379600 CTAGE6Q86UF2 777 aa10.59□□□□□ -0.71
NHLRC3-202ENST00000379600 CTAGE4Q8IX94 777 aa10.59□□□□□ -0.71
NHLRC3-202ENST00000379600 NUP133Q8WUM0 1156 aa10.59□□□□□ -0.71
NHLRC3-202ENST00000379600 CTAGE1Q96RT6 745 aa10.59□□□□□ -0.71
NHLRC3-202ENST00000379600 VPS16Q9H269 839 aa10.59□□□□□ -0.71
NHLRC3-202ENST00000379600 MYO6Q9UM54 1294 aa10.59□□□□□ -0.71
NHLRC3-202ENST00000379600 CEP131Q9UPN4 1083 aa10.59□□□□□ -0.71
NHLRC3-202ENST00000379600 DLEC1Q9Y238 1755 aa10.59□□□□□ -0.71
NHLRC3-202ENST00000379600 PRPF6O94906 941 aaKnown RBP10.59□□□□□ -0.71
NHLRC3-202ENST00000379600 PDXDC2PQ6P474 469 aa10.59□□□□□ -0.71
NHLRC3-202ENST00000379600 TRAPPC11Q7Z392 1133 aa10.59□□□□□ -0.71
NHLRC3-202ENST00000379600 IRF2BP1Q8IU81 584 aa10.59□□□□□ -0.71
NHLRC3-202ENST00000379600 TMTC1Q8IUR5 882 aa10.59□□□□□ -0.71
NHLRC3-202ENST00000379600 TAB2Q9NYJ8 693 aa10.59□□□□□ -0.71
NHLRC3-202ENST00000379600 ERLIN1O75477 346 aa10.59□□□□□ -0.71
NHLRC3-202ENST00000379600 ADGRA1Q86SQ6 560 aa10.59□□□□□ -0.71
NHLRC3-202ENST00000379600 DISP2A7MBM2 1401 aa10.59□□□□□ -0.71
NHLRC3-202ENST00000379600 COL4A1P02462 1669 aa10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 PLEKHA8P1O95397 391 aa10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 COPB1P53618 953 aaKnown RBP10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 HERVK_113P62684 666 aa10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 FAM71BQ8TC56 605 aa10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 MMS19Q96T76 1030 aa10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 PLEKHA4Q9H4M7 779 aa10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 CWC15Q9P013 229 aaKnown RBP10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 ASAP1Q9ULH1 1129 aa10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 IRS4O14654 1257 aaPredicted RBP10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 ENC1O14682 589 aa10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 UQCRFS1P1P0C7P4 283 aa10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 AARSP49588 968 aaKnown RBP eCLIP10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 PUM3Q15397 648 aaKnown RBP10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 ZNF174Q15697 407 aa10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 TCP11X2Q5H9J9 407 aa10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 CYP26C1Q6V0L0 522 aa10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 RNF26Q9BY78 433 aaPredicted RBP10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 FAM204AQ9H8W3 233 aa10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 MYO1AQ9UBC5 1043 aa10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 SLC4A4Q9Y6R1 1079 aa10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 CICQ96RK0 1608 aaPredicted RBP10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 BAZ2AQ9UIF9 1905 aaKnown RBP10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 SRGAP2O75044 1071 aa10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 EIF3JO75822 258 aaKnown RBP10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 WDR59Q6PJI9 974 aa10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 KIF6Q6ZMV9 814 aa10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 IPO4Q8TEX9 1081 aaKnown RBP10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 LPIN2Q92539 896 aa10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 DUOX1Q9NRD9 1551 aa10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 TOMM22Q9NS69 142 aa10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 RWDD2AQ9UIY3 292 aa10.58□□□□□ -0.72
NHLRC3-202ENST00000379600 TNKSO95271 1327 aa10.57□□□□□ -0.72
NHLRC3-202ENST00000379600 PNPLA7Q6ZV29 1317 aa10.57□□□□□ -0.72
NHLRC3-202ENST00000379600 N4BP3O15049 544 aa10.57□□□□□ -0.72
NHLRC3-202ENST00000379600 ATP1A1P05023 1023 aaKnown RBP10.57□□□□□ -0.72
NHLRC3-202ENST00000379600 RCAN1P53805 252 aa10.57□□□□□ -0.72
NHLRC3-202ENST00000379600 USP14P54578 494 aa10.57□□□□□ -0.72
NHLRC3-202ENST00000379600 PIP4K2BP78356 416 aa10.57□□□□□ -0.72
NHLRC3-202ENST00000379600 FILIP1LQ4L180 1135 aa10.57□□□□□ -0.72
NHLRC3-202ENST00000379600 MIGA1Q8NAN2 632 aa10.57□□□□□ -0.72
NHLRC3-202ENST00000379600 CCDC102AQ96A19 550 aa10.57□□□□□ -0.72
NHLRC3-202ENST00000379600 RNF216Q9NWF9 866 aaPredicted RBP10.57□□□□□ -0.72
NHLRC3-202ENST00000379600 COL5A2P05997 1499 aaPredicted RBP10.57□□□□□ -0.72
NHLRC3-202ENST00000379600 KCNJ18B7U540 433 aa10.57□□□□□ -0.72
NHLRC3-202ENST00000379600 ANKRD65E5RJM6 399 aa10.57□□□□□ -0.72
NHLRC3-202ENST00000379600 PSMD14O00487 310 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms