RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 ZNF444Q8N0Y2 327 aaPredicted RBP17.03■□□□□ 0.32
PRNP-201ENST00000379440 CNNM3Q8NE01 707 aa17.03■□□□□ 0.32
PRNP-201ENST00000379440 R3HCC1Q9Y3T6 440 aaKnown RBP17.03■□□□□ 0.32
PRNP-201ENST00000379440 APBA3O96018 575 aa17.03■□□□□ 0.32
PRNP-201ENST00000379440 IRX3P78415 501 aaPredicted RBP17.03■□□□□ 0.32
PRNP-201ENST00000379440 DNTTIP2Q5QJE6 756 aaKnown RBP17.03■□□□□ 0.32
PRNP-201ENST00000379440 USP49Q70CQ1 688 aa17.03■□□□□ 0.32
PRNP-201ENST00000379440 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.03■□□□□ 0.32
PRNP-201ENST00000379440 TUBE1Q9UJT0 475 aa17.03■□□□□ 0.32
PRNP-201ENST00000379440 ROBO3Q96MS0 1386 aa17.02■□□□□ 0.32
PRNP-201ENST00000379440 TPM3P06753 285 aa17.02■□□□□ 0.32
PRNP-201ENST00000379440 SCG2P13521 617 aa17.02■□□□□ 0.32
PRNP-201ENST00000379440 RASA1P20936 1047 aa17.02■□□□□ 0.32
PRNP-201ENST00000379440 RHBDL3P58872 404 aa17.02■□□□□ 0.32
PRNP-201ENST00000379440 CCDC144BQ3MJ40 725 aa17.02■□□□□ 0.32
PRNP-201ENST00000379440 SRPRBQ9Y5M8 271 aaKnown RBP17.02■□□□□ 0.32
PRNP-201ENST00000379440 SRGNP10124 158 aa17.02■□□□□ 0.31
PRNP-201ENST00000379440 LRMPQ12912 555 aa17.02■□□□□ 0.31
PRNP-201ENST00000379440 TNFRSF25Q93038 417 aa17.02■□□□□ 0.31
PRNP-201ENST00000379440 AKT1S1Q96B36 256 aa17.02■□□□□ 0.31
PRNP-201ENST00000379440 CSRNP2Q9H175 543 aa17.02■□□□□ 0.31
PRNP-201ENST00000379440 ATP6V0A2Q9Y487 856 aa17.02■□□□□ 0.31
PRNP-201ENST00000379440 TRIM75PA6NK02 468 aa17.01■□□□□ 0.31
PRNP-201ENST00000379440 F8W031 263 aaPredicted RBP17.01■□□□□ 0.31
PRNP-201ENST00000379440 POLR2DO15514 142 aaKnown RBP17.01■□□□□ 0.31
PRNP-201ENST00000379440 KIF5BP33176 963 aa17.01■□□□□ 0.31
PRNP-201ENST00000379440 PFKFB3Q16875 520 aaPredicted RBP17.01■□□□□ 0.31
PRNP-201ENST00000379440 NLGN1Q8N2Q7 840 aa17.01■□□□□ 0.31
PRNP-201ENST00000379440 STX8Q9UNK0 236 aa17.01■□□□□ 0.31
PRNP-201ENST00000379440 CEP131Q9UPN4 1083 aa17.01■□□□□ 0.31
PRNP-201ENST00000379440 FLT1P17948 1338 aa17.01■□□□□ 0.31
PRNP-201ENST00000379440 NLRP5P59047 1200 aa17.01■□□□□ 0.31
PRNP-201ENST00000379440 PDILTQ8N807 584 aa17.01■□□□□ 0.31
PRNP-201ENST00000379440 KIAA1524Q8TCG1 905 aa17.01■□□□□ 0.31
PRNP-201ENST00000379440 NAV1Q8NEY1 1877 aa17.01■□□□□ 0.31
PRNP-201ENST00000379440 CDK8P49336 464 aa17■□□□□ 0.31
PRNP-201ENST00000379440 ZNF174Q15697 407 aa17■□□□□ 0.31
PRNP-201ENST00000379440 TBC1D22AQ8WUA7 517 aa17■□□□□ 0.31
PRNP-201ENST00000379440 ANKS1AQ92625 1134 aa17■□□□□ 0.31
PRNP-201ENST00000379440 BPIFA3Q9BQP9 254 aa17■□□□□ 0.31
PRNP-201ENST00000379440 MXD3Q9BW11 206 aa17■□□□□ 0.31
PRNP-201ENST00000379440 BRMS1Q9HCU9 246 aa17■□□□□ 0.31
PRNP-201ENST00000379440 SERTAD1Q9UHV2 236 aa17■□□□□ 0.31
PRNP-201ENST00000379440 PCDHA5Q9Y5H7 936 aa17■□□□□ 0.31
PRNP-201ENST00000379440 ANKRD31Q8N7Z5 1873 aa17■□□□□ 0.31
PRNP-201ENST00000379440 RASGRP2Q7LDG7 609 aa17■□□□□ 0.31
PRNP-201ENST00000379440 GPKOWQ92917 476 aaPredicted RBP eCLIP17■□□□□ 0.31
PRNP-201ENST00000379440 FAM163AQ96GL9 167 aaPredicted RBP17■□□□□ 0.31
PRNP-201ENST00000379440 MRFAP1L1Q96HT8 127 aa17■□□□□ 0.31
PRNP-201ENST00000379440 TMEM47Q9BQJ4 181 aa17■□□□□ 0.31
PRNP-201ENST00000379440 RNF216Q9NWF9 866 aaPredicted RBP17■□□□□ 0.31
PRNP-201ENST00000379440 MAD2L2Q9UI95 211 aa17■□□□□ 0.31
PRNP-201ENST00000379440 FAM205AQ6ZU69 1335 aa16.99■□□□□ 0.31
PRNP-201ENST00000379440 CDC25BP30305 580 aa16.99■□□□□ 0.31
PRNP-201ENST00000379440 MDM2Q00987 491 aaPredicted RBP16.99■□□□□ 0.31
PRNP-201ENST00000379440 NCAPHQ15003 741 aa16.99■□□□□ 0.31
PRNP-201ENST00000379440 DOK7Q18PE1 504 aa16.99■□□□□ 0.31
PRNP-201ENST00000379440 SLC35G1Q2M3R5 365 aa16.99■□□□□ 0.31
PRNP-201ENST00000379440 MSL1Q68DK7 614 aa16.99■□□□□ 0.31
PRNP-201ENST00000379440 TCP11L1Q9NUJ3 509 aa16.99■□□□□ 0.31
PRNP-201ENST00000379440 DAGLAQ9Y4D2 1042 aa16.99■□□□□ 0.31
PRNP-201ENST00000379440 CDK5RAP2Q96SN8 1893 aa16.99■□□□□ 0.31
PRNP-201ENST00000379440 GAKO14976 1311 aa16.99■□□□□ 0.31
PRNP-201ENST00000379440 LTBP1Q14766 1721 aa16.99■□□□□ 0.31
PRNP-201ENST00000379440 PLSCR1O15162 318 aa16.99■□□□□ 0.31
PRNP-201ENST00000379440 MMP10P09238 476 aa16.99■□□□□ 0.31
PRNP-201ENST00000379440 PIK3AP1Q6ZUJ8 805 aa16.99■□□□□ 0.31
PRNP-201ENST00000379440 GRAMD1CQ8IYS0 662 aa16.99■□□□□ 0.31
PRNP-201ENST00000379440 ZNF579Q8NAF0 562 aaKnown RBP16.99■□□□□ 0.31
PRNP-201ENST00000379440 GRM4Q14833 912 aa16.98■□□□□ 0.31
PRNP-201ENST00000379440 C16orf86Q6ZW13 317 aa16.98■□□□□ 0.31
PRNP-201ENST00000379440 TMC4Q7Z404 712 aa16.98■□□□□ 0.31
PRNP-201ENST00000379440 CERS5Q8N5B7 392 aa16.98■□□□□ 0.31
PRNP-201ENST00000379440 EYA3Q99504 573 aa16.98■□□□□ 0.31
PRNP-201ENST00000379440 ZC3H12CQ9C0D7 883 aaKnown RBP16.98■□□□□ 0.31
PRNP-201ENST00000379440 PRR29P0C7W0 189 aa16.98■□□□□ 0.31
PRNP-201ENST00000379440 GOLGA8HP0CJ92 632 aa16.98■□□□□ 0.31
PRNP-201ENST00000379440 NPR1P16066 1061 aa16.98■□□□□ 0.31
PRNP-201ENST00000379440 PLCG2P16885 1265 aa16.98■□□□□ 0.31
PRNP-201ENST00000379440 ARID5BQ14865 1188 aa16.98■□□□□ 0.31
PRNP-201ENST00000379440 TTC38Q5R3I4 469 aa16.98■□□□□ 0.31
PRNP-201ENST00000379440 CERS3Q8IU89 383 aa16.98■□□□□ 0.31
PRNP-201ENST00000379440 SLF2Q8IX21 1173 aa16.98■□□□□ 0.31
PRNP-201ENST00000379440 CACTINQ8WUQ7 758 aaKnown RBP16.98■□□□□ 0.31
PRNP-201ENST00000379440 EPSTI1Q96J88 318 aa16.98■□□□□ 0.31
PRNP-201ENST00000379440 COA1Q9GZY4 146 aa16.98■□□□□ 0.31
PRNP-201ENST00000379440 LRRC37AA6NMS7 1700 aa16.97■□□□□ 0.31
PRNP-201ENST00000379440 CYTH3O43739 400 aa16.97■□□□□ 0.31
PRNP-201ENST00000379440 PICALMQ13492 652 aa16.97■□□□□ 0.31
PRNP-201ENST00000379440 CCDC94Q9BW85 323 aaPredicted RBP16.97■□□□□ 0.31
PRNP-201ENST00000379440 CPVLQ9H3G5 476 aa16.97■□□□□ 0.31
PRNP-201ENST00000379440 BMP6P22004 513 aa16.97■□□□□ 0.31
PRNP-201ENST00000379440 TYW1BQ6NUM6 668 aa16.97■□□□□ 0.31
PRNP-201ENST00000379440 SPTLC3Q9NUV7 552 aa16.97■□□□□ 0.31
PRNP-201ENST00000379440 SNED1Q8TER0 1413 aa16.96■□□□□ 0.31
PRNP-201ENST00000379440 A0A087X0B3 334 aa16.96■□□□□ 0.31
PRNP-201ENST00000379440 POSTNQ15063 836 aa16.96■□□□□ 0.31
PRNP-201ENST00000379440 CCDC178Q5BJE1 867 aa16.96■□□□□ 0.31
PRNP-201ENST00000379440 DPP8Q6V1X1 898 aaPredicted RBP16.96■□□□□ 0.31
PRNP-201ENST00000379440 FILIP1Q7Z7B0 1213 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms