RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 SMIM22K7EJ46 135 aa12.02□□□□□ -0.49
POLR2J3-201ENST00000379340 PLEKHA8P1O95397 391 aa12.02□□□□□ -0.49
POLR2J3-201ENST00000379340 USP17L8P0C7I0 530 aa12.02□□□□□ -0.49
POLR2J3-201ENST00000379340 NPR1P16066 1061 aa12.02□□□□□ -0.49
POLR2J3-201ENST00000379340 PTPREP23469 700 aa12.02□□□□□ -0.49
POLR2J3-201ENST00000379340 BTDP43251 543 aa12.02□□□□□ -0.49
POLR2J3-201ENST00000379340 SHC4Q6S5L8 630 aa12.02□□□□□ -0.49
POLR2J3-201ENST00000379340 MRFAP1L1Q96HT8 127 aa12.02□□□□□ -0.49
POLR2J3-201ENST00000379340 COA1Q9GZY4 146 aa12.02□□□□□ -0.49
POLR2J3-201ENST00000379340 MKNK2Q9HBH9 465 aa12.02□□□□□ -0.49
POLR2J3-201ENST00000379340 TUBE1Q9UJT0 475 aa12.02□□□□□ -0.49
POLR2J3-201ENST00000379340 JAG2Q9Y219 1238 aa12.02□□□□□ -0.49
POLR2J3-201ENST00000379340 ATP6V0A2Q9Y487 856 aa12.02□□□□□ -0.49
POLR2J3-201ENST00000379340 ZC3H4Q9UPT8 1303 aaKnown RBP12.02□□□□□ -0.49
POLR2J3-201ENST00000379340 UBE2Q2LH0YL09 131 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 ALDH1B1P30837 517 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 TOB1P50616 345 aaPredicted RBP12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 TERF1P54274 439 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 TPM4P67936 248 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 TFAP4Q01664 338 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 DIXDC1Q155Q3 683 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 FAM47AQ5JRC9 791 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 ZNF444Q8N0Y2 327 aaPredicted RBP12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 CCDC82Q8N4S0 544 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 PIBF1Q8WXW3 757 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 SH3GLB2Q9NR46 395 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 SRPRBQ9Y5M8 271 aaKnown RBP12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 V9GY48 417 aaPredicted RBP12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 MYH1P12882 1939 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 TRIM75PA6NK02 468 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 SMTNL1A8MU46 457 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 C6orf229H3BNL8 230 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 SCG2P13521 617 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 CALML3P27482 149 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 PDE6BP35913 854 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 TRAPPC10P48553 1259 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 GRM4Q14833 912 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 PFKFB3Q16875 520 aaPredicted RBP12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 MFSD14BQ5SR56 506 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 RCSD1Q6JBY9 416 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 KANK3Q6NY19 840 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 PPP4R3CPQ6ZMV5 832 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 TEX11Q8IYF3 940 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 CMTR1Q8N1G2 835 aaKnown RBP12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 TGFBRAP1Q8WUH2 860 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 CCDC34Q96HJ3 373 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 LZTS2Q9BRK4 669 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 VPS54Q9P1Q0 977 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 POLLQ9UGP5 575 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 FBXO2Q9UK22 296 aaPredicted RBP12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 KCNH3Q9ULD8 1083 aa12.01□□□□□ -0.49
POLR2J3-201ENST00000379340 TSPY3P0CV98 308 aa12□□□□□ -0.49
POLR2J3-201ENST00000379340 TSPY8P0CW00 308 aa12□□□□□ -0.49
POLR2J3-201ENST00000379340 NR5A1Q13285 461 aa12□□□□□ -0.49
POLR2J3-201ENST00000379340 KRBA2Q6ZNG9 492 aa12□□□□□ -0.49
POLR2J3-201ENST00000379340 C16orf86Q6ZW13 317 aa12□□□□□ -0.49
POLR2J3-201ENST00000379340 DHX40Q8IX18 779 aaKnown RBP12□□□□□ -0.49
POLR2J3-201ENST00000379340 SRBD1Q8N5C6 995 aaKnown RBP12□□□□□ -0.49
POLR2J3-201ENST00000379340 PNMA1Q8ND90 353 aa12□□□□□ -0.49
POLR2J3-201ENST00000379340 FERMT2Q96AC1 680 aa12□□□□□ -0.49
POLR2J3-201ENST00000379340 GPR101Q96P66 508 aaPredicted RBP12□□□□□ -0.49
POLR2J3-201ENST00000379340 TMX4Q9H1E5 349 aaPredicted RBP12□□□□□ -0.49
POLR2J3-201ENST00000379340 CABP5Q9NP86 173 aa12□□□□□ -0.49
POLR2J3-201ENST00000379340 CREBZFQ9NS37 354 aa12□□□□□ -0.49
POLR2J3-201ENST00000379340 IKBKBO14920 756 aa11.99□□□□□ -0.49
POLR2J3-201ENST00000379340 MYO1BO43795 1136 aa11.99□□□□□ -0.49
POLR2J3-201ENST00000379340 SRGNP10124 158 aa11.99□□□□□ -0.49
POLR2J3-201ENST00000379340 DHX8Q14562 1220 aaKnown RBP11.99□□□□□ -0.49
POLR2J3-201ENST00000379340 GRIK5Q16478 980 aa11.99□□□□□ -0.49
POLR2J3-201ENST00000379340 MAPKAPK5Q8IW41 473 aa11.99□□□□□ -0.49
POLR2J3-201ENST00000379340 DRC7Q8IY82 874 aa11.99□□□□□ -0.49
POLR2J3-201ENST00000379340 CNNM3Q8NE01 707 aa11.99□□□□□ -0.49
POLR2J3-201ENST00000379340 OXER1Q8TDS5 423 aa11.99□□□□□ -0.49
POLR2J3-201ENST00000379340 TNFRSF25Q93038 417 aa11.99□□□□□ -0.49
POLR2J3-201ENST00000379340 TAOK2Q9UL54 1235 aa11.99□□□□□ -0.49
POLR2J3-201ENST00000379340 PCDHB6Q9Y5E3 794 aa11.99□□□□□ -0.49
POLR2J3-201ENST00000379340 COL11A2P13942 1736 aaPredicted RBP11.98□□□□□ -0.49
POLR2J3-201ENST00000379340 NEMFO60524 1076 aa11.98□□□□□ -0.49
POLR2J3-201ENST00000379340 NMT2O60551 498 aa11.98□□□□□ -0.49
POLR2J3-201ENST00000379340 RASA1P20936 1047 aa11.98□□□□□ -0.49
POLR2J3-201ENST00000379340 RHBDL3P58872 404 aa11.98□□□□□ -0.49
POLR2J3-201ENST00000379340 EVX2Q03828 476 aa11.98□□□□□ -0.49
POLR2J3-201ENST00000379340 GALNT17Q6IS24 598 aa11.98□□□□□ -0.49
POLR2J3-201ENST00000379340 CHADLQ6NUI6 762 aa11.98□□□□□ -0.49
POLR2J3-201ENST00000379340 C2CD5Q86YS7 1000 aa11.98□□□□□ -0.49
POLR2J3-201ENST00000379340 MPNDQ8N594 471 aa11.98□□□□□ -0.49
POLR2J3-201ENST00000379340 AOPEPQ8N6M6 819 aa11.98□□□□□ -0.49
POLR2J3-201ENST00000379340 TTLL6Q8N841 843 aa11.98□□□□□ -0.49
POLR2J3-201ENST00000379340 CCDC148Q8NFR7 591 aa11.98□□□□□ -0.49
POLR2J3-201ENST00000379340 NEDD1Q8NHV4 660 aa11.98□□□□□ -0.49
POLR2J3-201ENST00000379340 DYNLL2Q96FJ2 89 aa11.98□□□□□ -0.49
POLR2J3-201ENST00000379340 NAP1L5Q96NT1 182 aaPredicted RBP11.98□□□□□ -0.49
POLR2J3-201ENST00000379340 CLIC6Q96NY7 704 aa11.98□□□□□ -0.49
POLR2J3-201ENST00000379340 EYA3Q99504 573 aa11.98□□□□□ -0.49
POLR2J3-201ENST00000379340 IL17RBQ9NRM6 502 aa11.98□□□□□ -0.49
POLR2J3-201ENST00000379340 ZNF219Q9P2Y4 722 aaPredicted RBP11.98□□□□□ -0.49
POLR2J3-201ENST00000379340 CLIP2Q9UDT6 1046 aa11.98□□□□□ -0.49
POLR2J3-201ENST00000379340 FLT1P17948 1338 aa11.98□□□□□ -0.49
POLR2J3-201ENST00000379340 SMARCA1P28370 1054 aa11.97□□□□□ -0.49
POLR2J3-201ENST00000379340 CDK8P49336 464 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms