RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 MYH6P13533 1939 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 GOLGA6CA6NDK9 693 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 PPP1R3GB7ZBB8 358 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 TEX33O43247 280 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 GOLGA6DP0CG33 693 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 EEF1GP26641 437 aaKnown RBP9.24□□□□□ -0.93
PTPRR-203ENST00000378778 PPP1R2P41236 205 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 TOB1P50616 345 aaPredicted RBP9.24□□□□□ -0.93
PTPRR-203ENST00000378778 TIMM10P62072 90 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 TRIM28Q13263 835 aaKnown RBP9.24□□□□□ -0.93
PTPRR-203ENST00000378778 EMBQ6PCB8 327 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 CNPY4Q8N129 248 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 C3orf20Q8ND61 904 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 LRRC59Q96AG4 307 aaKnown RBP9.24□□□□□ -0.93
PTPRR-203ENST00000378778 GOLGA6AQ9NYA3 693 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 DOCK2Q92608 1830 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 MYH13Q9UKX3 1938 aa9.24□□□□□ -0.93
PTPRR-203ENST00000378778 PAPPAQ13219 1627 aa9.23□□□□□ -0.93
PTPRR-203ENST00000378778 TRIM75PA6NK02 468 aa9.23□□□□□ -0.93
PTPRR-203ENST00000378778 TMCO5BA8MYB1 307 aa9.23□□□□□ -0.93
PTPRR-203ENST00000378778 N4BP3O15049 544 aa9.23□□□□□ -0.93
PTPRR-203ENST00000378778 EIF3HO15372 352 aaKnown RBP eCLIP9.23□□□□□ -0.93
PTPRR-203ENST00000378778 CHGBP05060 677 aa9.23□□□□□ -0.93
PTPRR-203ENST00000378778 PRR29P0C7W0 189 aa9.23□□□□□ -0.93
PTPRR-203ENST00000378778 COPB1P53618 953 aaKnown RBP9.23□□□□□ -0.93
PTPRR-203ENST00000378778 GLE1Q53GS7 698 aaKnown RBP9.23□□□□□ -0.93
PTPRR-203ENST00000378778 NFXL1Q6ZNB6 911 aa9.23□□□□□ -0.93
PTPRR-203ENST00000378778 AENQ8WTP8 325 aaKnown RBP9.23□□□□□ -0.93
PTPRR-203ENST00000378778 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.23□□□□□ -0.93
PTPRR-203ENST00000378778 PAGE5Q96GU1 130 aa9.23□□□□□ -0.93
PTPRR-203ENST00000378778 ZNF496Q96IT1 587 aaPredicted RBP9.23□□□□□ -0.93
PTPRR-203ENST00000378778 IRX2Q9BZI1 471 aaPredicted RBP9.23□□□□□ -0.93
PTPRR-203ENST00000378778 ZSWIM4Q9H7M6 989 aa9.23□□□□□ -0.93
PTPRR-203ENST00000378778 FAM217BQ9NTX9 383 aaPredicted RBP9.23□□□□□ -0.93
PTPRR-203ENST00000378778 A0A0G2JLW4 131 aa9.23□□□□□ -0.93
PTPRR-203ENST00000378778 GOLGA6BA6NDN3 693 aa9.23□□□□□ -0.93
PTPRR-203ENST00000378778 FSBPO95073 299 aa9.23□□□□□ -0.93
PTPRR-203ENST00000378778 IPO7O95373 1038 aaKnown RBP9.23□□□□□ -0.93
PTPRR-203ENST00000378778 GNAT2P19087 354 aa9.23□□□□□ -0.93
PTPRR-203ENST00000378778 TRAPPC10P48553 1259 aa9.23□□□□□ -0.93
PTPRR-203ENST00000378778 IRAK1P51617 712 aa9.23□□□□□ -0.93
PTPRR-203ENST00000378778 HAND2P61296 217 aa9.23□□□□□ -0.93
PTPRR-203ENST00000378778 ERVK-24P63145 666 aa9.23□□□□□ -0.93
PTPRR-203ENST00000378778 MEA1Q16626 185 aa9.23□□□□□ -0.93
PTPRR-203ENST00000378778 TMEM67Q5HYA8 995 aa9.23□□□□□ -0.93
PTPRR-203ENST00000378778 TAX1BP1Q86VP1 789 aa9.23□□□□□ -0.93
PTPRR-203ENST00000378778 NOA1Q8NC60 698 aaKnown RBP9.23□□□□□ -0.93
PTPRR-203ENST00000378778 XAGE2Q96GT9 111 aa9.23□□□□□ -0.93
PTPRR-203ENST00000378778 NUP88Q99567 741 aaPredicted RBP9.23□□□□□ -0.93
PTPRR-203ENST00000378778 CAPS2Q9BXY5 557 aa9.23□□□□□ -0.93
PTPRR-203ENST00000378778 RNF26Q9BY78 433 aaPredicted RBP9.23□□□□□ -0.93
PTPRR-203ENST00000378778 RNF14Q9UBS8 474 aa9.23□□□□□ -0.93
PTPRR-203ENST00000378778 CAPN11Q9UMQ6 739 aa9.23□□□□□ -0.93
PTPRR-203ENST00000378778 RTL9Q8NET4 1388 aa9.22□□□□□ -0.93
PTPRR-203ENST00000378778 FOXN1O15353 648 aa9.22□□□□□ -0.93
PTPRR-203ENST00000378778 GTPBP6O43824 516 aaPredicted RBP9.22□□□□□ -0.93
PTPRR-203ENST00000378778 RANBP6O60518 1105 aaKnown RBP9.22□□□□□ -0.93
PTPRR-203ENST00000378778 UQCRFS1P1P0C7P4 283 aa9.22□□□□□ -0.93
PTPRR-203ENST00000378778 FXR1P51114 621 aaKnown RBP eCLIP9.22□□□□□ -0.93
PTPRR-203ENST00000378778 KRT31Q15323 416 aa9.22□□□□□ -0.93
PTPRR-203ENST00000378778 CCDC57Q2TAC2 916 aa9.22□□□□□ -0.93
PTPRR-203ENST00000378778 FIGNQ5HY92 759 aa9.22□□□□□ -0.93
PTPRR-203ENST00000378778 CYB5R4Q7L1T6 521 aa9.22□□□□□ -0.93
PTPRR-203ENST00000378778 ANKLE2Q86XL3 938 aa9.22□□□□□ -0.93
PTPRR-203ENST00000378778 TRMT44Q8IYL2 757 aaKnown RBP9.22□□□□□ -0.93
PTPRR-203ENST00000378778 CAVIN3Q969G5 261 aa9.22□□□□□ -0.93
PTPRR-203ENST00000378778 PURBQ96QR8 312 aaKnown RBP9.22□□□□□ -0.93
PTPRR-203ENST00000378778 CDC5LQ99459 802 aaKnown RBP9.22□□□□□ -0.93
PTPRR-203ENST00000378778 SLC26A6Q9BXS9 759 aa9.22□□□□□ -0.93
PTPRR-203ENST00000378778 FAM169AQ9Y6X4 670 aa9.22□□□□□ -0.93
PTPRR-203ENST00000378778 EXOC5O00471 708 aa9.22□□□□□ -0.93
PTPRR-203ENST00000378778 INPP5BP32019 993 aa9.22□□□□□ -0.93
PTPRR-203ENST00000378778 KRT9P35527 623 aa9.22□□□□□ -0.93
PTPRR-203ENST00000378778 EPHB4P54760 987 aa9.22□□□□□ -0.93
PTPRR-203ENST00000378778 AKAP17AQ02040 695 aaKnown RBP9.22□□□□□ -0.93
PTPRR-203ENST00000378778 FKBP4Q02790 459 aaKnown RBP eCLIP9.22□□□□□ -0.93
PTPRR-203ENST00000378778 PAK1Q13153 545 aa9.22□□□□□ -0.93
PTPRR-203ENST00000378778 RTN1Q16799 776 aa9.22□□□□□ -0.93
PTPRR-203ENST00000378778 TCP11X2Q5H9J9 407 aa9.22□□□□□ -0.93
PTPRR-203ENST00000378778 ZNF658Q5TYW1 1059 aaPredicted RBP9.22□□□□□ -0.93
PTPRR-203ENST00000378778 FOXR1Q6PIV2 292 aa9.22□□□□□ -0.93
PTPRR-203ENST00000378778 PRPF38AQ8NAV1 312 aaKnown RBP9.22□□□□□ -0.93
PTPRR-203ENST00000378778 SELENOOQ9BVL4 669 aa9.22□□□□□ -0.93
PTPRR-203ENST00000378778 NBPF3Q9H094 633 aa9.22□□□□□ -0.93
PTPRR-203ENST00000378778 RNF41Q9H4P4 317 aaPredicted RBP9.22□□□□□ -0.93
PTPRR-203ENST00000378778 THAP9Q9H5L6 903 aa9.22□□□□□ -0.93
PTPRR-203ENST00000378778 LUC7L2Q9Y383 392 aaKnown RBP9.22□□□□□ -0.93
PTPRR-203ENST00000378778 MYH2Q9UKX2 1941 aa9.22□□□□□ -0.93
PTPRR-203ENST00000378778 RGPD5Q99666 1765 aa9.21□□□□□ -0.93
PTPRR-203ENST00000378778 KCNA6P17658 529 aa9.21□□□□□ -0.93
PTPRR-203ENST00000378778 ATP6V1AP38606 617 aa9.21□□□□□ -0.93
PTPRR-203ENST00000378778 ARHGAP27Q6ZUM4 889 aa9.21□□□□□ -0.93
PTPRR-203ENST00000378778 CRACR2BQ8N4Y2 399 aaPredicted RBP9.21□□□□□ -0.93
PTPRR-203ENST00000378778 EIF1ADQ8N9N8 165 aaKnown RBP9.21□□□□□ -0.93
PTPRR-203ENST00000378778 ACRBPQ8NEB7 543 aa9.21□□□□□ -0.93
PTPRR-203ENST00000378778 PUS7LQ9H0K6 701 aaKnown RBP9.21□□□□□ -0.93
PTPRR-203ENST00000378778 CSRNP2Q9H175 543 aa9.21□□□□□ -0.93
PTPRR-203ENST00000378778 GJB4Q9NTQ9 266 aa9.21□□□□□ -0.93
PTPRR-203ENST00000378778 TSKSQ9UJT2 592 aa9.21□□□□□ -0.93
PTPRR-203ENST00000378778 RREB1Q92766 1687 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms