RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 CUL4AQ13619 759 aa18.43■□□□□ 0.54
CCDC107-204ENST00000378409 MOB2Q70IA6 237 aa18.43■□□□□ 0.54
CCDC107-204ENST00000378409 CCDC84Q86UT8 332 aaPredicted RBP18.43■□□□□ 0.54
CCDC107-204ENST00000378409 SIAH1Q8IUQ4 282 aa18.43■□□□□ 0.54
CCDC107-204ENST00000378409 CHMP4CQ96CF2 233 aa18.43■□□□□ 0.54
CCDC107-204ENST00000378409 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.43■□□□□ 0.54
CCDC107-204ENST00000378409 RCAN1P53805 252 aa18.42■□□□□ 0.54
CCDC107-204ENST00000378409 TROAPQ12815 778 aa18.42■□□□□ 0.54
CCDC107-204ENST00000378409 RTN1Q16799 776 aa18.42■□□□□ 0.54
CCDC107-204ENST00000378409 NOL9Q5SY16 702 aaKnown RBP18.42■□□□□ 0.54
CCDC107-204ENST00000378409 ARMC9Q7Z3E5 817 aa18.42■□□□□ 0.54
CCDC107-204ENST00000378409 MKL1Q969V6 931 aa18.42■□□□□ 0.54
CCDC107-204ENST00000378409 CSADQ9Y600 493 aa18.42■□□□□ 0.54
CCDC107-204ENST00000378409 PTPRFP10586 1907 aa18.42■□□□□ 0.54
CCDC107-204ENST00000378409 NID2Q14112 1375 aa18.42■□□□□ 0.54
CCDC107-204ENST00000378409 BAZ2BQ9UIF8 2168 aaKnown RBP18.41■□□□□ 0.54
CCDC107-204ENST00000378409 USP17L5A8MUK1 530 aa18.41■□□□□ 0.54
CCDC107-204ENST00000378409 KIF3CO14782 793 aa18.41■□□□□ 0.54
CCDC107-204ENST00000378409 VGLL4Q14135 290 aa18.41■□□□□ 0.54
CCDC107-204ENST00000378409 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.41■□□□□ 0.54
CCDC107-204ENST00000378409 FANCBQ8NB91 859 aa18.41■□□□□ 0.54
CCDC107-204ENST00000378409 CTCFLQ8NI51 663 aaPredicted RBP18.41■□□□□ 0.54
CCDC107-204ENST00000378409 ACER1Q8TDN7 264 aa18.41■□□□□ 0.54
CCDC107-204ENST00000378409 A0A1W2PRG0 241 aa18.4■□□□□ 0.54
CCDC107-204ENST00000378409 CPLX1O14810 134 aa18.4■□□□□ 0.54
CCDC107-204ENST00000378409 RAD21O60216 631 aa18.4■□□□□ 0.54
CCDC107-204ENST00000378409 DHX16O60231 1041 aaKnown RBP18.4■□□□□ 0.54
CCDC107-204ENST00000378409 CELF2O95319 508 aaKnown RBP18.4■□□□□ 0.54
CCDC107-204ENST00000378409 PTPRAP18433 802 aa18.4■□□□□ 0.54
CCDC107-204ENST00000378409 CDC27P30260 824 aa18.4■□□□□ 0.54
CCDC107-204ENST00000378409 ECE1P42892 770 aa18.4■□□□□ 0.54
CCDC107-204ENST00000378409 MAP3K11Q16584 847 aa18.4■□□□□ 0.54
CCDC107-204ENST00000378409 RASGRP2Q7LDG7 609 aa18.4■□□□□ 0.54
CCDC107-204ENST00000378409 ANKRD13AQ8IZ07 590 aa18.4■□□□□ 0.54
CCDC107-204ENST00000378409 SH2D4AQ9H788 454 aa18.4■□□□□ 0.54
CCDC107-204ENST00000378409 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.4■□□□□ 0.54
CCDC107-204ENST00000378409 SNCAIPQ9Y6H5 919 aa18.4■□□□□ 0.54
CCDC107-204ENST00000378409 CCDC196A0A1B0GTZ2 297 aa18.39■□□□□ 0.53
CCDC107-204ENST00000378409 DTNBO60941 627 aa18.39■□□□□ 0.53
CCDC107-204ENST00000378409 ITGBL1O95965 494 aaPredicted RBP18.39■□□□□ 0.53
CCDC107-204ENST00000378409 HSPA6P17066 643 aa18.39■□□□□ 0.53
CCDC107-204ENST00000378409 KIF5BP33176 963 aa18.39■□□□□ 0.53
CCDC107-204ENST00000378409 ADD1P35611 737 aaKnown RBP18.39■□□□□ 0.53
CCDC107-204ENST00000378409 GRM4Q14833 912 aa18.39■□□□□ 0.53
CCDC107-204ENST00000378409 INTS4Q96HW7 963 aaKnown RBP18.39■□□□□ 0.53
CCDC107-204ENST00000378409 MAP3K14Q99558 947 aa18.39■□□□□ 0.53
CCDC107-204ENST00000378409 FEZ1Q99689 392 aa18.39■□□□□ 0.53
CCDC107-204ENST00000378409 AS3MTQ9HBK9 375 aa18.39■□□□□ 0.53
CCDC107-204ENST00000378409 GOPCQ9HD26 462 aa18.39■□□□□ 0.53
CCDC107-204ENST00000378409 FAM217BQ9NTX9 383 aaPredicted RBP18.39■□□□□ 0.53
CCDC107-204ENST00000378409 RBM28Q9NW13 759 aaKnown RBP18.39■□□□□ 0.53
CCDC107-204ENST00000378409 TMX2Q9Y320 296 aa18.39■□□□□ 0.53
CCDC107-204ENST00000378409 UBE2Q2LH0YL09 131 aa18.38■□□□□ 0.53
CCDC107-204ENST00000378409 PARP1P09874 1014 aaKnown RBP18.38■□□□□ 0.53
CCDC107-204ENST00000378409 PDHBP11177 359 aa18.38■□□□□ 0.53
CCDC107-204ENST00000378409 PPP2R5BQ15173 497 aa18.38■□□□□ 0.53
CCDC107-204ENST00000378409 ZYXQ15942 572 aaKnown RBP18.38■□□□□ 0.53
CCDC107-204ENST00000378409 SLFN13Q68D06 897 aa18.38■□□□□ 0.53
CCDC107-204ENST00000378409 CPLX2Q6PUV4 134 aaKnown RBP18.38■□□□□ 0.53
CCDC107-204ENST00000378409 CLMNQ96JQ2 1002 aa18.38■□□□□ 0.53
CCDC107-204ENST00000378409 LLPHQ9BRT6 129 aaKnown RBP18.38■□□□□ 0.53
CCDC107-204ENST00000378409 ELP3Q9H9T3 547 aa18.38■□□□□ 0.53
CCDC107-204ENST00000378409 GBA2Q9HCG7 927 aaPredicted RBP18.38■□□□□ 0.53
CCDC107-204ENST00000378409 SYNPO2Q9UMS6 1093 aa18.38■□□□□ 0.53
CCDC107-204ENST00000378409 ZHX2Q9Y6X8 837 aa18.38■□□□□ 0.53
CCDC107-204ENST00000378409 F5H6K3 240 aa18.37■□□□□ 0.53
CCDC107-204ENST00000378409 PPFIA3O75145 1194 aa18.37■□□□□ 0.53
CCDC107-204ENST00000378409 NDUFB10O96000 172 aa18.37■□□□□ 0.53
CCDC107-204ENST00000378409 FKBP1BP68106 108 aa18.37■□□□□ 0.53
CCDC107-204ENST00000378409 KLRC3Q07444 240 aa18.37■□□□□ 0.53
CCDC107-204ENST00000378409 CCDC96Q2M329 555 aa18.37■□□□□ 0.53
CCDC107-204ENST00000378409 USP17L2Q6R6M4 530 aa18.37■□□□□ 0.53
CCDC107-204ENST00000378409 C2orf69Q8N8R5 385 aa18.37■□□□□ 0.53
CCDC107-204ENST00000378409 ZNF280CQ8ND82 737 aa18.37■□□□□ 0.53
CCDC107-204ENST00000378409 SMC1BQ8NDV3 1235 aa18.37■□□□□ 0.53
CCDC107-204ENST00000378409 NSUN7Q8NE18 718 aaKnown RBP18.37■□□□□ 0.53
CCDC107-204ENST00000378409 GMCL1P1Q8NEA9 526 aa18.37■□□□□ 0.53
CCDC107-204ENST00000378409 WDR18Q9BV38 432 aa18.37■□□□□ 0.53
CCDC107-204ENST00000378409 MAD2L2Q9UI95 211 aa18.37■□□□□ 0.53
CCDC107-204ENST00000378409 ISY1Q9ULR0 285 aaKnown RBP18.37■□□□□ 0.53
CCDC107-204ENST00000378409 SMC3Q9UQE7 1217 aa18.37■□□□□ 0.53
CCDC107-204ENST00000378409 CEP350Q5VT06 3117 aa18.36■□□□□ 0.53
CCDC107-204ENST00000378409 PTPDC1A2A3K4 754 aa18.36■□□□□ 0.53
CCDC107-204ENST00000378409 JAK2O60674 1132 aa18.36■□□□□ 0.53
CCDC107-204ENST00000378409 CDKL5O76039 1030 aa18.36■□□□□ 0.53
CCDC107-204ENST00000378409 PLEKHA8P1O95397 391 aa18.36■□□□□ 0.53
CCDC107-204ENST00000378409 CTDNEP1O95476 244 aa18.36■□□□□ 0.53
CCDC107-204ENST00000378409 GOLGA8HP0CJ92 632 aa18.36■□□□□ 0.53
CCDC107-204ENST00000378409 SPP2Q13103 211 aa18.36■□□□□ 0.53
CCDC107-204ENST00000378409 ASPRV1Q53RT3 343 aa18.36■□□□□ 0.53
CCDC107-204ENST00000378409 LDLRAD1Q5T700 205 aa18.36■□□□□ 0.53
CCDC107-204ENST00000378409 FRMPD2Q68DX3 1309 aaPredicted RBP18.36■□□□□ 0.53
CCDC107-204ENST00000378409 TMTC3Q6ZXV5 915 aa18.36■□□□□ 0.53
CCDC107-204ENST00000378409 SPICE1Q8N0Z3 855 aa18.36■□□□□ 0.53
CCDC107-204ENST00000378409 CMTR1Q8N1G2 835 aaKnown RBP18.36■□□□□ 0.53
CCDC107-204ENST00000378409 STAG2Q8N3U4 1231 aa18.36■□□□□ 0.53
CCDC107-204ENST00000378409 DCAF4Q8WV16 495 aa18.36■□□□□ 0.53
CCDC107-204ENST00000378409 VCPKMTQ9H867 229 aa18.36■□□□□ 0.53
CCDC107-204ENST00000378409 PALM3A6NDB9 673 aaPredicted RBP18.35■□□□□ 0.53
CCDC107-204ENST00000378409 TRIM75PA6NK02 468 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms