RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 POTEB2H3BUK9 544 aa14.79□□□□□ -0.04
NPHP4-203ENST00000378169 BACH1O14867 736 aa14.79□□□□□ -0.04
NPHP4-203ENST00000378169 LMAN1P49257 510 aa14.79□□□□□ -0.04
NPHP4-203ENST00000378169 EVCP57679 992 aa14.79□□□□□ -0.04
NPHP4-203ENST00000378169 MECOMQ03112 1051 aa14.79□□□□□ -0.04
NPHP4-203ENST00000378169 SEPT7Q16181 437 aaKnown RBP14.79□□□□□ -0.04
NPHP4-203ENST00000378169 SPECC1LQ69YQ0 1117 aa14.79□□□□□ -0.04
NPHP4-203ENST00000378169 CTR9Q6PD62 1173 aa14.79□□□□□ -0.04
NPHP4-203ENST00000378169 ARHGEF10LQ9HCE6 1279 aa14.79□□□□□ -0.04
NPHP4-203ENST00000378169 FAM170AA1A519 330 aa14.79□□□□□ -0.04
NPHP4-203ENST00000378169 ARHGAP6O43182 974 aa14.79□□□□□ -0.04
NPHP4-203ENST00000378169 POLD1P28340 1107 aa14.79□□□□□ -0.04
NPHP4-203ENST00000378169 RABL6Q3YEC7 729 aaPredicted RBP14.79□□□□□ -0.04
NPHP4-203ENST00000378169 GOLGA1Q92805 767 aa14.79□□□□□ -0.04
NPHP4-203ENST00000378169 DESI2Q9BSY9 194 aa14.79□□□□□ -0.04
NPHP4-203ENST00000378169 RNF26Q9BY78 433 aaPredicted RBP14.79□□□□□ -0.04
NPHP4-203ENST00000378169 MROH2AA6NES4 1674 aa14.78□□□□□ -0.04
NPHP4-203ENST00000378169 U2AF2P26368 475 aaKnown RBP eCLIP14.78□□□□□ -0.04
NPHP4-203ENST00000378169 TBC1D5Q92609 795 aa14.78□□□□□ -0.04
NPHP4-203ENST00000378169 IMPACTQ9P2X3 320 aa14.78□□□□□ -0.04
NPHP4-203ENST00000378169 TAF6LQ9Y6J9 622 aa14.78□□□□□ -0.04
NPHP4-203ENST00000378169 DLGAP5Q15398 846 aa14.78□□□□□ -0.04
NPHP4-203ENST00000378169 SMYD4Q8IYR2 804 aaPredicted RBP14.78□□□□□ -0.04
NPHP4-203ENST00000378169 SLF1Q9BQI6 1058 aa14.78□□□□□ -0.04
NPHP4-203ENST00000378169 TRPC5Q9UL62 973 aaPredicted RBP14.78□□□□□ -0.04
NPHP4-203ENST00000378169 LEMD3Q9Y2U8 911 aa14.78□□□□□ -0.04
NPHP4-203ENST00000378169 DBNDD1Q9H9R9 158 aa14.78□□□□□ -0.04
NPHP4-203ENST00000378169 FMNL1O95466 1100 aaPredicted RBP14.77□□□□□ -0.04
NPHP4-203ENST00000378169 PDIA6Q15084 440 aa14.77□□□□□ -0.04
NPHP4-203ENST00000378169 NSMFQ6X4W1 530 aa14.77□□□□□ -0.04
NPHP4-203ENST00000378169 STOX1Q6ZVD7 989 aa14.77□□□□□ -0.04
NPHP4-203ENST00000378169 RGS22Q8NE09 1264 aa14.77□□□□□ -0.04
NPHP4-203ENST00000378169 CKAP4Q07065 602 aaKnown RBP14.77□□□□□ -0.04
NPHP4-203ENST00000378169 FAM207AQ9NSI2 230 aaPredicted RBP14.77□□□□□ -0.04
NPHP4-203ENST00000378169 BSDC1Q9NW68 430 aaPredicted RBP14.77□□□□□ -0.04
NPHP4-203ENST00000378169 USP17L3A6NCW0 530 aa14.77□□□□□ -0.05
NPHP4-203ENST00000378169 USP17L4A6NCW7 530 aa14.77□□□□□ -0.05
NPHP4-203ENST00000378169 DDAH1O94760 285 aa14.77□□□□□ -0.05
NPHP4-203ENST00000378169 TUBB4AP04350 444 aa14.77□□□□□ -0.05
NPHP4-203ENST00000378169 LIFRP42702 1097 aa14.77□□□□□ -0.05
NPHP4-203ENST00000378169 RBM6P78332 1123 aaKnown RBP14.77□□□□□ -0.05
NPHP4-203ENST00000378169 ELF2Q15723 593 aa14.77□□□□□ -0.05
NPHP4-203ENST00000378169 HAUS3Q68CZ6 603 aa14.77□□□□□ -0.05
NPHP4-203ENST00000378169 USP17L1Q7RTZ2 530 aa14.77□□□□□ -0.05
NPHP4-203ENST00000378169 MAATS1Q7Z4T9 603 aa14.77□□□□□ -0.05
NPHP4-203ENST00000378169 C2CD5Q86YS7 1000 aa14.77□□□□□ -0.05
NPHP4-203ENST00000378169 CEP112Q8N8E3 955 aa14.77□□□□□ -0.05
NPHP4-203ENST00000378169 KIFC2Q96AC6 838 aa14.77□□□□□ -0.05
NPHP4-203ENST00000378169 PSMB7Q99436 277 aa14.77□□□□□ -0.05
NPHP4-203ENST00000378169 MINPP1Q9UNW1 487 aa14.77□□□□□ -0.05
NPHP4-203ENST00000378169 PCDHB6Q9Y5E3 794 aa14.77□□□□□ -0.05
NPHP4-203ENST00000378169 ANKRD62A6NC57 917 aa14.77□□□□□ -0.05
NPHP4-203ENST00000378169 PDE6BP35913 854 aa14.77□□□□□ -0.05
NPHP4-203ENST00000378169 CYB5R4Q7L1T6 521 aa14.77□□□□□ -0.05
NPHP4-203ENST00000378169 NLGN1Q8N2Q7 840 aa14.77□□□□□ -0.05
NPHP4-203ENST00000378169 ZC3H13Q5T200 1668 aaKnown RBP14.77□□□□□ -0.05
NPHP4-203ENST00000378169 MYRIPQ8NFW9 859 aa14.76□□□□□ -0.05
NPHP4-203ENST00000378169 PGBD1Q96JS3 809 aa14.76□□□□□ -0.05
NPHP4-203ENST00000378169 TCP10L2B9ZVM9 353 aa14.76□□□□□ -0.05
NPHP4-203ENST00000378169 SEMA3EO15041 775 aa14.76□□□□□ -0.05
NPHP4-203ENST00000378169 CYP2D6P10635 497 aa14.76□□□□□ -0.05
NPHP4-203ENST00000378169 RNASE9P60153 205 aaKnown RBP14.76□□□□□ -0.05
NPHP4-203ENST00000378169 USP17L2Q6R6M4 530 aa14.76□□□□□ -0.05
NPHP4-203ENST00000378169 CLEC4GQ6UXB4 293 aa14.76□□□□□ -0.05
NPHP4-203ENST00000378169 ZFP91Q96JP5 570 aaPredicted RBP14.76□□□□□ -0.05
NPHP4-203ENST00000378169 FOXP1Q9H334 677 aaPredicted RBP14.76□□□□□ -0.05
NPHP4-203ENST00000378169 PSTPIP2Q9H939 334 aa14.76□□□□□ -0.05
NPHP4-203ENST00000378169 AGLP35573 1532 aa14.76□□□□□ -0.05
NPHP4-203ENST00000378169 CETN3O15182 167 aa14.76□□□□□ -0.05
NPHP4-203ENST00000378169 MMP1P03956 469 aa14.76□□□□□ -0.05
NPHP4-203ENST00000378169 CCDC172P0C7W6 258 aa14.76□□□□□ -0.05
NPHP4-203ENST00000378169 MYCLP12524 364 aaPredicted RBP14.76□□□□□ -0.05
NPHP4-203ENST00000378169 GOLGA8FQ08AF8 430 aa14.76□□□□□ -0.05
NPHP4-203ENST00000378169 GOLGA8DPQ0D2H9 430 aa14.76□□□□□ -0.05
NPHP4-203ENST00000378169 TRIM28Q13263 835 aaKnown RBP14.76□□□□□ -0.05
NPHP4-203ENST00000378169 NEK8Q86SG6 692 aa14.76□□□□□ -0.05
NPHP4-203ENST00000378169 LRRC8AQ8IWT6 810 aa14.76□□□□□ -0.05
NPHP4-203ENST00000378169 SEPT12Q8IYM1 358 aa14.76□□□□□ -0.05
NPHP4-203ENST00000378169 SPICE1Q8N0Z3 855 aa14.76□□□□□ -0.05
NPHP4-203ENST00000378169 FAM212AQ96EL1 285 aa14.76□□□□□ -0.05
NPHP4-203ENST00000378169 NLRC4Q9NPP4 1024 aa14.76□□□□□ -0.05
NPHP4-203ENST00000378169 ZNF500O60304 480 aaPredicted RBP14.75□□□□□ -0.05
NPHP4-203ENST00000378169 RPL13P26373 211 aaKnown RBP14.75□□□□□ -0.05
NPHP4-203ENST00000378169 CERKLQ49MI3 558 aaPredicted RBP14.75□□□□□ -0.05
NPHP4-203ENST00000378169 TDRD7Q8NHU6 1098 aaKnown RBP14.75□□□□□ -0.05
NPHP4-203ENST00000378169 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.75□□□□□ -0.05
NPHP4-203ENST00000378169 MRFAP1L1Q96HT8 127 aa14.75□□□□□ -0.05
NPHP4-203ENST00000378169 SH2D4AQ9H788 454 aa14.75□□□□□ -0.05
NPHP4-203ENST00000378169 PCDHA12Q9UN75 941 aa14.75□□□□□ -0.05
NPHP4-203ENST00000378169 CEMIPQ8WUJ3 1361 aa14.75□□□□□ -0.05
NPHP4-203ENST00000378169 NEDD4P46934 1319 aa14.75□□□□□ -0.05
NPHP4-203ENST00000378169 PLEKHA8P1O95397 391 aa14.75□□□□□ -0.05
NPHP4-203ENST00000378169 PPP2R3AQ06190 1150 aa14.75□□□□□ -0.05
NPHP4-203ENST00000378169 TBC1D9BQ66K14 1250 aa14.75□□□□□ -0.05
NPHP4-203ENST00000378169 CACTINQ8WUQ7 758 aaKnown RBP14.75□□□□□ -0.05
NPHP4-203ENST00000378169 ERO1AQ96HE7 468 aa14.75□□□□□ -0.05
NPHP4-203ENST00000378169 FAM107BQ9H098 131 aa14.75□□□□□ -0.05
NPHP4-203ENST00000378169 FRMPD1Q5SYB0 1578 aa14.75□□□□□ -0.05
NPHP4-203ENST00000378169 CTNNA2P26232 953 aa14.75□□□□□ -0.05
NPHP4-203ENST00000378169 IFI16Q16666 785 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms