RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 EXOC4Q96A65 974 aa20.39■□□□□ 0.85
GNE-201ENST00000377902 SLC4A9Q96Q91 983 aa20.39■□□□□ 0.85
GNE-201ENST00000377902 NUP88Q99567 741 aaPredicted RBP20.39■□□□□ 0.85
GNE-201ENST00000377902 CHP1Q99653 195 aa20.39■□□□□ 0.85
GNE-201ENST00000377902 ABHD10Q9NUJ1 306 aa20.39■□□□□ 0.85
GNE-201ENST00000377902 ZBTB1Q9Y2K1 713 aa20.39■□□□□ 0.85
GNE-201ENST00000377902 PAPPAQ13219 1627 aa20.39■□□□□ 0.85
GNE-201ENST00000377902 XDHP47989 1333 aa20.39■□□□□ 0.85
GNE-201ENST00000377902 AK7Q96M32 723 aa20.39■□□□□ 0.85
GNE-201ENST00000377902 MTRQ99707 1265 aa20.39■□□□□ 0.85
GNE-201ENST00000377902 TRIM34Q9BYJ4 488 aa20.39■□□□□ 0.85
GNE-201ENST00000377902 NACAP1Q9BZK3 213 aa20.39■□□□□ 0.85
GNE-201ENST00000377902 KAT6BQ8WYB5 2073 aa20.38■□□□□ 0.85
GNE-201ENST00000377902 KRT2P35908 639 aa20.38■□□□□ 0.85
GNE-201ENST00000377902 AKAP17AQ02040 695 aaKnown RBP20.38■□□□□ 0.85
GNE-201ENST00000377902 RRAGBQ5VZM2 374 aa20.38■□□□□ 0.85
GNE-201ENST00000377902 FOXR1Q6PIV2 292 aa20.38■□□□□ 0.85
GNE-201ENST00000377902 HNRNPLLQ8WVV9 542 aaKnown RBP20.38■□□□□ 0.85
GNE-201ENST00000377902 PHF20Q9BVI0 1012 aa20.38■□□□□ 0.85
GNE-201ENST00000377902 USP5P45974 858 aa20.38■□□□□ 0.85
GNE-201ENST00000377902 PTGDRQ13258 359 aa20.38■□□□□ 0.85
GNE-201ENST00000377902 SEC23AQ15436 765 aa20.38■□□□□ 0.85
GNE-201ENST00000377902 CNGA4Q8IV77 575 aa20.38■□□□□ 0.85
GNE-201ENST00000377902 GSDMAQ96QA5 445 aa20.38■□□□□ 0.85
GNE-201ENST00000377902 LRP2BPQ9P2M1 347 aa20.38■□□□□ 0.85
GNE-201ENST00000377902 PLEKHG2Q9H7P9 1386 aa20.37■□□□□ 0.85
GNE-201ENST00000377902 ENC1O14682 589 aa20.37■□□□□ 0.85
GNE-201ENST00000377902 SLC5A1P13866 664 aa20.37■□□□□ 0.85
GNE-201ENST00000377902 EVX2Q03828 476 aa20.37■□□□□ 0.85
GNE-201ENST00000377902 CTAGE1Q96RT6 745 aa20.37■□□□□ 0.85
GNE-201ENST00000377902 NAPGQ99747 312 aaPredicted RBP20.37■□□□□ 0.85
GNE-201ENST00000377902 HDAC6Q9UBN7 1215 aa20.37■□□□□ 0.85
GNE-201ENST00000377902 WTIPA6NIX2 430 aaPredicted RBP20.37■□□□□ 0.85
GNE-201ENST00000377902 VEGFAP15692 232 aaPredicted RBP20.37■□□□□ 0.85
GNE-201ENST00000377902 C10orf67Q8IYJ2 551 aa20.37■□□□□ 0.85
GNE-201ENST00000377902 ENAHQ8N8S7 591 aaPredicted RBP20.37■□□□□ 0.85
GNE-201ENST00000377902 LRRIQ3A6PVS8 624 aaPredicted RBP20.36■□□□□ 0.85
GNE-201ENST00000377902 FUT2Q10981 343 aa20.36■□□□□ 0.85
GNE-201ENST00000377902 CASP8Q14790 479 aa20.36■□□□□ 0.85
GNE-201ENST00000377902 RNF26Q9BY78 433 aaPredicted RBP20.36■□□□□ 0.85
GNE-201ENST00000377902 GUCA1BQ9UMX6 200 aa20.36■□□□□ 0.85
GNE-201ENST00000377902 CTAGE15A4D2H0 777 aa20.36■□□□□ 0.85
GNE-201ENST00000377902 CTAGE8P0CG41 777 aa20.36■□□□□ 0.85
GNE-201ENST00000377902 IL17AQ16552 155 aa20.36■□□□□ 0.85
GNE-201ENST00000377902 CTAGE6Q86UF2 777 aa20.36■□□□□ 0.85
GNE-201ENST00000377902 CTAGE4Q8IX94 777 aa20.36■□□□□ 0.85
GNE-201ENST00000377902 CCDC102AQ96A19 550 aa20.36■□□□□ 0.85
GNE-201ENST00000377902 TTF2Q9UNY4 1162 aaKnown RBP20.36■□□□□ 0.85
GNE-201ENST00000377902 MYH6P13533 1939 aa20.35■□□□□ 0.85
GNE-201ENST00000377902 KRT9P35527 623 aa20.35■□□□□ 0.85
GNE-201ENST00000377902 NPY5RQ15761 445 aa20.35■□□□□ 0.85
GNE-201ENST00000377902 TMTC2Q8N394 836 aa20.35■□□□□ 0.85
GNE-201ENST00000377902 GOLGA5Q8TBA6 731 aa20.35■□□□□ 0.85
GNE-201ENST00000377902 ABCF2Q9UG63 623 aa20.35■□□□□ 0.85
GNE-201ENST00000377902 GDAQ9Y2T3 454 aa20.35■□□□□ 0.85
GNE-201ENST00000377902 REXO2Q9Y3B8 237 aaKnown RBP20.35■□□□□ 0.85
GNE-201ENST00000377902 MROH5Q6ZUA9 1318 aa20.35■□□□□ 0.85
GNE-201ENST00000377902 CYP7A1P22680 504 aa20.35■□□□□ 0.85
GNE-201ENST00000377902 ACTN2P35609 894 aa20.35■□□□□ 0.85
GNE-201ENST00000377902 COPB1P53618 953 aaKnown RBP20.35■□□□□ 0.85
GNE-201ENST00000377902 MYO1CO00159 1063 aa20.34■□□□□ 0.85
GNE-201ENST00000377902 SRGAP2O75044 1071 aa20.34■□□□□ 0.85
GNE-201ENST00000377902 TTC38Q5R3I4 469 aa20.34■□□□□ 0.85
GNE-201ENST00000377902 TMTC1Q8IUR5 882 aa20.34■□□□□ 0.85
GNE-201ENST00000377902 SOS2Q07890 1332 aaPredicted RBP20.34■□□□□ 0.85
GNE-201ENST00000377902 COL5A2P05997 1499 aaPredicted RBP20.34■□□□□ 0.85
GNE-201ENST00000377902 TOGARAM1Q9Y4F4 1720 aa20.34■□□□□ 0.85
GNE-201ENST00000377902 TRIM49BA6NDI0 452 aa20.34■□□□□ 0.85
GNE-201ENST00000377902 MCM7P33993 719 aa20.34■□□□□ 0.85
GNE-201ENST00000377902 EEF2KMTQ96G04 330 aa20.34■□□□□ 0.85
GNE-201ENST00000377902 GDAP1L1Q96MZ0 367 aa20.34■□□□□ 0.85
GNE-201ENST00000377902 PSD3Q9NYI0 1048 aa20.34■□□□□ 0.85
GNE-201ENST00000377902 MYO6Q9UM54 1294 aa20.34■□□□□ 0.85
GNE-201ENST00000377902 KCNJ18B7U540 433 aa20.33■□□□□ 0.85
GNE-201ENST00000377902 ERLIN1O75477 346 aa20.33■□□□□ 0.85
GNE-201ENST00000377902 CYP19A1P11511 503 aaPredicted RBP20.33■□□□□ 0.85
GNE-201ENST00000377902 FECHP22830 423 aa20.33■□□□□ 0.85
GNE-201ENST00000377902 EVA1CP58658 441 aa20.33■□□□□ 0.85
GNE-201ENST00000377902 KCNJ12Q14500 433 aa20.33■□□□□ 0.85
GNE-201ENST00000377902 E2F4Q16254 413 aa20.33■□□□□ 0.85
GNE-201ENST00000377902 TCP11X2Q5H9J9 407 aa20.33■□□□□ 0.85
GNE-201ENST00000377902 NELFBQ8WX92 580 aa20.33■□□□□ 0.85
GNE-201ENST00000377902 CARD10Q9BWT7 1032 aa20.33■□□□□ 0.85
GNE-201ENST00000377902 LIMA1Q9UHB6 759 aaKnown RBP20.33■□□□□ 0.85
GNE-201ENST00000377902 PNPLA7Q6ZV29 1317 aa20.33■□□□□ 0.85
GNE-201ENST00000377902 MYH3P11055 1940 aa20.33■□□□□ 0.85
GNE-201ENST00000377902 ITIH6Q6UXX5 1313 aa20.33■□□□□ 0.84
GNE-201ENST00000377902 NMT2O60551 498 aa20.33■□□□□ 0.84
GNE-201ENST00000377902 XBP1P17861 261 aa20.33■□□□□ 0.84
GNE-201ENST00000377902 AMPD2Q01433 879 aa20.33■□□□□ 0.84
GNE-201ENST00000377902 UBXN1Q04323 297 aa20.33■□□□□ 0.84
GNE-201ENST00000377902 CYP26C1Q6V0L0 522 aa20.33■□□□□ 0.84
GNE-201ENST00000377902 PIK3AP1Q6ZUJ8 805 aa20.33■□□□□ 0.84
GNE-201ENST00000377902 FERMT2Q96AC1 680 aa20.33■□□□□ 0.84
GNE-201ENST00000377902 PLEKHA4Q9H4M7 779 aa20.33■□□□□ 0.84
GNE-201ENST00000377902 TIAM2Q8IVF5 1701 aa20.32■□□□□ 0.84
GNE-201ENST00000377902 GNAT2P19087 354 aa20.32■□□□□ 0.84
GNE-201ENST00000377902 DZIP3Q86Y13 1208 aaKnown RBP20.32■□□□□ 0.84
GNE-201ENST00000377902 ESR2Q92731 530 aa20.32■□□□□ 0.84
GNE-201ENST00000377902 TNFRSF25Q93038 417 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms