RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 TRIM7Q9C029 511 aa9.77□□□□□ -0.85
PCDH9-202ENST00000377865 STX8Q9UNK0 236 aa9.77□□□□□ -0.85
PCDH9-202ENST00000377865 PIK3C2BO00750 1634 aa9.77□□□□□ -0.85
PCDH9-202ENST00000377865 RPN1P04843 607 aaKnown RBP9.77□□□□□ -0.85
PCDH9-202ENST00000377865 TRAPPC10P48553 1259 aa9.77□□□□□ -0.85
PCDH9-202ENST00000377865 PPARAQ07869 468 aa9.77□□□□□ -0.85
PCDH9-202ENST00000377865 TRAF1Q13077 416 aa9.77□□□□□ -0.85
PCDH9-202ENST00000377865 SFMBT2Q5VUG0 894 aa9.77□□□□□ -0.85
PCDH9-202ENST00000377865 ARHGEF25Q86VW2 580 aa9.77□□□□□ -0.85
PCDH9-202ENST00000377865 BLZF1Q9H2G9 400 aa9.77□□□□□ -0.85
PCDH9-202ENST00000377865 RWDD2AQ9UIY3 292 aa9.77□□□□□ -0.85
PCDH9-202ENST00000377865 USP31Q70CQ4 1352 aa9.77□□□□□ -0.85
PCDH9-202ENST00000377865 STK36Q9NRP7 1315 aa9.77□□□□□ -0.85
PCDH9-202ENST00000377865 EXOC5O00471 708 aa9.77□□□□□ -0.85
PCDH9-202ENST00000377865 EPHB4P54760 987 aa9.77□□□□□ -0.85
PCDH9-202ENST00000377865 IFNL3Q8IZI9 196 aa9.77□□□□□ -0.85
PCDH9-202ENST00000377865 A0A1W2PRG0 241 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 PHKG2P15735 406 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 HPDP32754 393 aaPredicted RBP9.76□□□□□ -0.85
PCDH9-202ENST00000377865 ADD1P35611 737 aaKnown RBP9.76□□□□□ -0.85
PCDH9-202ENST00000377865 IQCB1Q15051 598 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 GALNT17Q6IS24 598 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 CRACR2BQ8N4Y2 399 aaPredicted RBP9.76□□□□□ -0.85
PCDH9-202ENST00000377865 RGS22Q8NE09 1264 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 ANKRD2Q9GZV1 360 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 MTUS1Q9ULD2 1270 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 ACTN4O43707 911 aaKnown RBP9.76□□□□□ -0.85
PCDH9-202ENST00000377865 MMP1P03956 469 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 MYL1P05976 194 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 MAGEA9P43362 315 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 PROSER3Q2NL68 480 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 SEL1L2Q5TEA6 688 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 APOA5Q6Q788 366 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 CABP7Q86V35 215 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 DHX37Q8IY37 1157 aaKnown RBP9.76□□□□□ -0.85
PCDH9-202ENST00000377865 FANCBQ8NB91 859 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 SYMPKQ92797 1274 aaKnown RBP9.76□□□□□ -0.85
PCDH9-202ENST00000377865 CUEDC2Q9H467 287 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 PARP1P09874 1014 aaKnown RBP9.76□□□□□ -0.85
PCDH9-202ENST00000377865 PLCG2P16885 1265 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 HMGB2P26583 209 aaKnown RBP9.76□□□□□ -0.85
PCDH9-202ENST00000377865 CSRNP2Q9H175 543 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.76□□□□□ -0.85
PCDH9-202ENST00000377865 SRPRBQ9Y5M8 271 aaKnown RBP9.76□□□□□ -0.85
PCDH9-202ENST00000377865 MRFAP1Q9Y605 127 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 CAPN7Q9Y6W3 813 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 ERVV-2B6SEH9 535 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 CALUO43852 315 aaPredicted RBP9.76□□□□□ -0.85
PCDH9-202ENST00000377865 CYP2C19P33261 490 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 RAPGEF1Q13905 1077 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 CASP8Q14790 479 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 PARP10Q53GL7 1025 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 TAOK1Q7L7X3 1001 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 CERS3Q8IU89 383 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 SYCP3Q8IZU3 236 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 VPS54Q9P1Q0 977 aa9.76□□□□□ -0.85
PCDH9-202ENST00000377865 E7EVH7 732 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 ATP11AP98196 1134 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 ARID5AQ03989 594 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 ZNF827Q17R98 1081 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 ZNF579Q8NAF0 562 aaKnown RBP9.75□□□□□ -0.85
PCDH9-202ENST00000377865 BCAS4Q8TDM0 211 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 FBF1Q8TES7 1133 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 CABS1Q96KC9 395 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 RNF26Q9BY78 433 aaPredicted RBP9.75□□□□□ -0.85
PCDH9-202ENST00000377865 SOWAHDA6NJG2 315 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 MFAP3LO75121 409 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 SLFN14P0C7P3 912 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 PTPN12Q05209 780 aaKnown RBP9.75□□□□□ -0.85
PCDH9-202ENST00000377865 GOLGA8FQ08AF8 430 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 GOLGA8DPQ0D2H9 430 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 TCIRG1Q13488 830 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 ZNF658Q5TYW1 1059 aaPredicted RBP9.75□□□□□ -0.85
PCDH9-202ENST00000377865 FNBP4Q8N3X1 1017 aaPredicted RBP9.75□□□□□ -0.85
PCDH9-202ENST00000377865 FAM89AQ96GI7 184 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 ZSCAN10Q96SZ4 725 aaPredicted RBP9.75□□□□□ -0.85
PCDH9-202ENST00000377865 TRAF5O00463 557 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 HLA-DOAP06340 250 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 EPB41P11171 864 aaKnown RBP9.75□□□□□ -0.85
PCDH9-202ENST00000377865 SETDB1Q15047 1291 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 NONOQ15233 471 aaKnown RBP eCLIP9.75□□□□□ -0.85
PCDH9-202ENST00000377865 RPS6KA1Q15418 735 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 PPP2R5EQ16537 467 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 ALS2CLQ60I27 953 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 CCDC170Q8IYT3 715 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 PLCD3Q8N3E9 789 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 PLIN2Q99541 437 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 MAPK8IP1Q9UQF2 711 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 BTBD18B2RXH4 712 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 PCCAP05165 728 aaPredicted RBP9.75□□□□□ -0.85
PCDH9-202ENST00000377865 PDE6AP16499 860 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 SLC8A1P32418 973 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 TYW1BQ6NUM6 668 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 USP37Q86T82 979 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 MCM9Q9NXL9 1143 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 RNF14Q9UBS8 474 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 LAD1O00515 517 aa9.75□□□□□ -0.85
PCDH9-202ENST00000377865 CCNT1O60563 726 aaKnown RBP9.75□□□□□ -0.85
PCDH9-202ENST00000377865 SF3B2Q13435 895 aaKnown RBP9.75□□□□□ -0.85
PCDH9-202ENST00000377865 ARMCX5Q6P1M9 558 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms