RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 GTF2A1P52655 376 aaPredicted RBP5.48□□□□□ -1.53
PCDH9-201ENST00000377861 ZNF131P52739 623 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 RNMTO43148 476 aaKnown RBP5.48□□□□□ -1.53
PCDH9-201ENST00000377861 LMBR1LQ6UX01 489 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 KRT28Q7Z3Y7 464 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 CPLX4Q7Z7G2 160 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 PRDM11Q9NQV5 511 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 CAMK4Q16566 473 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 AKNAD1Q5T1N1 836 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.48□□□□□ -1.53
PCDH9-201ENST00000377861 ALKBH8Q96BT7 664 aaKnown RBP5.48□□□□□ -1.53
PCDH9-201ENST00000377861 HYOU1Q9Y4L1 999 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 AP3M2P53677 418 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 DRG2P55039 364 aaKnown RBP5.48□□□□□ -1.53
PCDH9-201ENST00000377861 FAM20AQ96MK3 541 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 DHX36Q9H2U1 1008 aaKnown RBP5.48□□□□□ -1.53
PCDH9-201ENST00000377861 PCDH11XQ9BZA7 1347 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 PCDH11YQ9BZA8 1340 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 RHOT2Q8IXI1 618 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 MIPOL1Q8TD10 442 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 INPP5BP32019 993 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 ZKSCAN3Q9BRR0 538 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 NFE2L3Q9Y4A8 694 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 UGGT1Q9NYU2 1555 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 KLF18A0A0U1RQI7 1052 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 CFAP73A6NFT4 308 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 SRRM1Q8IYB3 904 aaKnown RBP5.48□□□□□ -1.53
PCDH9-201ENST00000377861 SPAG5Q96R06 1193 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 PDS5AQ29RF7 1337 aaKnown RBP5.48□□□□□ -1.53
PCDH9-201ENST00000377861 UBXN1Q04323 297 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 RAPGEF6Q8TEU7 1601 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 TSNAXIP1Q2TAA8 658 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 TTC31Q49AM3 519 aaPredicted RBP5.48□□□□□ -1.53
PCDH9-201ENST00000377861 ITSN2Q9NZM3 1697 aa5.48□□□□□ -1.53
PCDH9-201ENST00000377861 CHUKO15111 745 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 PAK1Q13153 545 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 CABP5Q9NP86 173 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 SSU72P8A0A1W2PR75 194 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 LONRF3Q496Y0 759 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 NLRP1Q9C000 1473 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 CHURC1Q8WUH1 139 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 BRIP1Q9BX63 1249 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 ATP6V1AP38606 617 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 LRIG3Q6UXM1 1119 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 ZNF804AQ7Z570 1209 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 CDAN1Q8IWY9 1227 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 C17orf75Q9HAS0 396 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 TBX3O15119 743 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 YY1AP1Q9H869 796 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 GOLGA8AA7E2F4 631 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 NPEPPSP55786 919 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 ZNF658Q5TYW1 1059 aaPredicted RBP5.47□□□□□ -1.53
PCDH9-201ENST00000377861 FAM237AA0A1B0GTK4 181 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 A0A1W2PQJ5 194 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 CSGALNACT2Q8N6G5 542 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 PAIP2Q9BPZ3 127 aaKnown RBP5.47□□□□□ -1.53
PCDH9-201ENST00000377861 RPS6KA5O75582 802 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 MAFGO15525 162 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 IL6STP40189 918 aaPredicted RBP5.47□□□□□ -1.53
PCDH9-201ENST00000377861 Q9H521 79 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 SEC24BO95487 1268 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 CCDC96Q2M329 555 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 PALB2Q86YC2 1186 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 DZIP1Q86YF9 867 aaKnown RBP5.47□□□□□ -1.53
PCDH9-201ENST00000377861 JPH2Q9BR39 696 aaPredicted RBP5.47□□□□□ -1.53
PCDH9-201ENST00000377861 GTPBP6O43824 516 aaPredicted RBP5.47□□□□□ -1.53
PCDH9-201ENST00000377861 KRT9P35527 623 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 RPS6KA1Q15418 735 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 IL1RAPL2Q9NP60 686 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 PTPDC1A2A3K4 754 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 RASGRP2Q7LDG7 609 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 CABS1Q96KC9 395 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 TEX9Q8N6V9 391 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 SCLT1Q96NL6 688 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 IMPG2Q9BZV3 1241 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 LMNTD2Q8IXW0 634 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 FBXO41Q8TF61 875 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 NKIRAS1Q9NYS0 192 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 LACTBP83111 547 aaPredicted RBP5.47□□□□□ -1.53
PCDH9-201ENST00000377861 CCDC174Q6PII3 467 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 ADAM21Q9UKJ8 722 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 KIF21AQ7Z4S6 1674 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 MAPK6Q16659 721 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 KRBA2Q6ZNG9 492 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 MAP7D3Q8IWC1 876 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 SETDB2Q96T68 719 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 ARPP21Q9UBL0 812 aaPredicted RBP5.47□□□□□ -1.53
PCDH9-201ENST00000377861 Q6ZUG5 572 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 NME9Q86XW9 330 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 CNPY3Q9BT09 278 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 MCM9Q9NXL9 1143 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 CASP14P31944 242 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 CNBD1Q8NA66 436 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 IL17REQ8NFR9 667 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 HSPD1P10809 573 aaKnown RBP5.47□□□□□ -1.53
PCDH9-201ENST00000377861 IL2RBP14784 551 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 MCM6Q14566 821 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 TMEM206Q9H813 350 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 NDUFAB1O14561 156 aa5.47□□□□□ -1.53
PCDH9-201ENST00000377861 MAGEC3Q8TD91 643 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms