RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 NAA35Q5VZE5 725 aa17.61■□□□□ 0.41
CSNK1A1-202ENST00000377843 KCTD16Q68DU8 428 aa17.61■□□□□ 0.41
CSNK1A1-202ENST00000377843 NOSTRINQ8IVI9 506 aa17.61■□□□□ 0.41
CSNK1A1-202ENST00000377843 CTAGE1Q96RT6 745 aa17.61■□□□□ 0.41
CSNK1A1-202ENST00000377843 TAB2Q9NYJ8 693 aa17.61■□□□□ 0.41
CSNK1A1-202ENST00000377843 MST1RQ04912 1400 aa17.61■□□□□ 0.41
CSNK1A1-202ENST00000377843 MYH8P13535 1937 aa17.6■□□□□ 0.41
CSNK1A1-202ENST00000377843 N4BP3O15049 544 aa17.6■□□□□ 0.41
CSNK1A1-202ENST00000377843 ZEB2O60315 1214 aa17.6■□□□□ 0.41
CSNK1A1-202ENST00000377843 PPARAQ07869 468 aa17.6■□□□□ 0.41
CSNK1A1-202ENST00000377843 CCDC122Q5T0U0 273 aa17.6■□□□□ 0.41
CSNK1A1-202ENST00000377843 ATG9AQ7Z3C6 839 aa17.6■□□□□ 0.41
CSNK1A1-202ENST00000377843 RALYLQ86SE5 291 aaKnown RBP17.6■□□□□ 0.41
CSNK1A1-202ENST00000377843 MICU3Q86XE3 530 aa17.6■□□□□ 0.41
CSNK1A1-202ENST00000377843 CAGE1Q8TC20 777 aa17.6■□□□□ 0.41
CSNK1A1-202ENST00000377843 CSRNP2Q9H175 543 aa17.6■□□□□ 0.41
CSNK1A1-202ENST00000377843 FAM217BQ9NTX9 383 aaPredicted RBP17.6■□□□□ 0.41
CSNK1A1-202ENST00000377843 GUCY1A2P33402 732 aa17.6■□□□□ 0.41
CSNK1A1-202ENST00000377843 NEXNQ0ZGT2 675 aa17.6■□□□□ 0.41
CSNK1A1-202ENST00000377843 TACO1Q9BSH4 297 aaKnown RBP17.6■□□□□ 0.41
CSNK1A1-202ENST00000377843 LRRC1Q9BTT6 524 aa17.6■□□□□ 0.41
CSNK1A1-202ENST00000377843 METTL22Q9BUU2 404 aaPredicted RBP17.6■□□□□ 0.41
CSNK1A1-202ENST00000377843 LACRTQ9GZZ8 138 aa17.6■□□□□ 0.41
CSNK1A1-202ENST00000377843 VCPKMTQ9H867 229 aa17.6■□□□□ 0.41
CSNK1A1-202ENST00000377843 ODF2LQ9ULJ1 636 aa17.6■□□□□ 0.41
CSNK1A1-202ENST00000377843 PXDNQ92626 1479 aa17.6■□□□□ 0.41
CSNK1A1-202ENST00000377843 EPB41P11171 864 aaKnown RBP17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 RDXP35241 583 aaKnown RBP17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 PIP4K2AP48426 406 aaPredicted RBP17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 SLC7A5Q01650 507 aa17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 GUCY1A3Q02108 690 aa17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 COPS6Q7L5N1 327 aa17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 FAM228AQ86W67 206 aa17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 CCDC13Q8IYE1 715 aa17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 RNPC3Q96LT9 517 aaKnown RBP17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 HAUS4Q9H6D7 363 aa17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 VEZTQ9HBM0 779 aa17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 KCNJ14Q9UNX9 436 aa17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 CTNND2Q9UQB3 1225 aa17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 DUSP10Q9Y6W6 482 aa17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 SH2B2O14492 632 aaPredicted RBP17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 IFIT1P09914 478 aaKnown RBP17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 PDHBP11177 359 aa17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 APBA1Q02410 837 aa17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 CKAP4Q07065 602 aaKnown RBP17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 LRCH2Q5VUJ6 765 aa17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 APOA5Q6Q788 366 aa17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 IQCA1Q86XH1 822 aa17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 CENPHQ9H3R5 247 aa17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 SLC24A3Q9HC58 644 aa17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 SLC40A1Q9NP59 571 aa17.59■□□□□ 0.41
CSNK1A1-202ENST00000377843 LSP1P33241 339 aa17.58■□□□□ 0.41
CSNK1A1-202ENST00000377843 NF2P35240 595 aa17.58■□□□□ 0.41
CSNK1A1-202ENST00000377843 SMTNP53814 917 aa17.58■□□□□ 0.41
CSNK1A1-202ENST00000377843 CCDC40Q4G0X9 1142 aa17.58■□□□□ 0.41
CSNK1A1-202ENST00000377843 RNF187Q5TA31 235 aaPredicted RBP17.58■□□□□ 0.41
CSNK1A1-202ENST00000377843 RPGRIP1Q96KN7 1286 aa17.58■□□□□ 0.41
CSNK1A1-202ENST00000377843 ANGEL1Q9UNK9 670 aaKnown RBP17.58■□□□□ 0.41
CSNK1A1-202ENST00000377843 DDX60Q8IY21 1712 aaKnown RBP17.58■□□□□ 0.4
CSNK1A1-202ENST00000377843 MARF1Q9Y4F3 1742 aaKnown RBP17.58■□□□□ 0.4
CSNK1A1-202ENST00000377843 SEMA3EO15041 775 aa17.58■□□□□ 0.4
CSNK1A1-202ENST00000377843 KRT14P02533 472 aa17.58■□□□□ 0.4
CSNK1A1-202ENST00000377843 COPB1P53618 953 aaKnown RBP17.58■□□□□ 0.4
CSNK1A1-202ENST00000377843 SEC24CP53992 1094 aa17.58■□□□□ 0.4
CSNK1A1-202ENST00000377843 WASHC4Q2M389 1173 aa17.58■□□□□ 0.4
CSNK1A1-202ENST00000377843 SPRED3Q2MJR0 410 aa17.58■□□□□ 0.4
CSNK1A1-202ENST00000377843 WDR59Q6PJI9 974 aa17.58■□□□□ 0.4
CSNK1A1-202ENST00000377843 DHX37Q8IY37 1157 aaKnown RBP17.58■□□□□ 0.4
CSNK1A1-202ENST00000377843 ZNF473Q8WTR7 871 aaKnown RBP17.58■□□□□ 0.4
CSNK1A1-202ENST00000377843 PUS7LQ9H0K6 701 aaKnown RBP17.58■□□□□ 0.4
CSNK1A1-202ENST00000377843 LIMA1Q9UHB6 759 aaKnown RBP17.58■□□□□ 0.4
CSNK1A1-202ENST00000377843 DDX20Q9UHI6 824 aaKnown RBP17.58■□□□□ 0.4
CSNK1A1-202ENST00000377843 TTC26A0AVF1 554 aa17.57■□□□□ 0.4
CSNK1A1-202ENST00000377843 ATP5J2-PTCD1G3V325 749 aa17.57■□□□□ 0.4
CSNK1A1-202ENST00000377843 PPP1R12AO14974 1030 aaPredicted RBP17.57■□□□□ 0.4
CSNK1A1-202ENST00000377843 PTCD1O75127 700 aaKnown RBP17.57■□□□□ 0.4
CSNK1A1-202ENST00000377843 GCFC2P16383 781 aaKnown RBP17.57■□□□□ 0.4
CSNK1A1-202ENST00000377843 HDLBPQ00341 1268 aaKnown RBP17.57■□□□□ 0.4
CSNK1A1-202ENST00000377843 SF3B2Q13435 895 aaKnown RBP17.57■□□□□ 0.4
CSNK1A1-202ENST00000377843 CHRNA2Q15822 529 aa17.57■□□□□ 0.4
CSNK1A1-202ENST00000377843 LMBR1LQ6UX01 489 aa17.57■□□□□ 0.4
CSNK1A1-202ENST00000377843 KIRREL3Q8IZU9 778 aa17.57■□□□□ 0.4
CSNK1A1-202ENST00000377843 PAGE5Q96GU1 130 aa17.57■□□□□ 0.4
CSNK1A1-202ENST00000377843 EPSTI1Q96J88 318 aa17.57■□□□□ 0.4
CSNK1A1-202ENST00000377843 PAGR1Q9BTK6 254 aa17.57■□□□□ 0.4
CSNK1A1-202ENST00000377843 OPA1O60313 960 aa17.57■□□□□ 0.4
CSNK1A1-202ENST00000377843 IARSP41252 1262 aaKnown RBP17.57■□□□□ 0.4
CSNK1A1-202ENST00000377843 NR5A1Q13285 461 aa17.57■□□□□ 0.4
CSNK1A1-202ENST00000377843 TRIM29Q14134 588 aa17.57■□□□□ 0.4
CSNK1A1-202ENST00000377843 YTHDF3Q7Z739 585 aaKnown RBP17.57■□□□□ 0.4
CSNK1A1-202ENST00000377843 EGFL6Q8IUX8 553 aa17.57■□□□□ 0.4
CSNK1A1-202ENST00000377843 TBC1D10CQ8IV04 446 aa17.57■□□□□ 0.4
CSNK1A1-202ENST00000377843 STAMQ92783 540 aa17.57■□□□□ 0.4
CSNK1A1-202ENST00000377843 ZIM3Q96PE6 472 aa17.57■□□□□ 0.4
CSNK1A1-202ENST00000377843 SMARCAL1Q9NZC9 954 aa17.57■□□□□ 0.4
CSNK1A1-202ENST00000377843 LRRC10BA6NIK2 292 aa17.56■□□□□ 0.4
CSNK1A1-202ENST00000377843 NEBLO76041 1014 aa17.56■□□□□ 0.4
CSNK1A1-202ENST00000377843 FKBP4Q02790 459 aaKnown RBP eCLIP17.56■□□□□ 0.4
CSNK1A1-202ENST00000377843 NNTQ13423 1086 aa17.56■□□□□ 0.4
CSNK1A1-202ENST00000377843 SH3RF1Q7Z6J0 888 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms