RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 PALM3A6NDB9 673 aaPredicted RBP13.73□□□□□ -0.21
VPS13A-204ENST00000376634 GOLGA8NF8WBI6 632 aa13.73□□□□□ -0.21
VPS13A-204ENST00000376634 TMEM87BQ96K49 555 aa13.73□□□□□ -0.21
VPS13A-204ENST00000376634 RPS6KB1P23443 525 aa13.73□□□□□ -0.21
VPS13A-204ENST00000376634 CCDC68Q9H2F9 335 aa13.73□□□□□ -0.21
VPS13A-204ENST00000376634 TTC38Q5R3I4 469 aa13.73□□□□□ -0.21
VPS13A-204ENST00000376634 CCDC13Q8IYE1 715 aa13.73□□□□□ -0.21
VPS13A-204ENST00000376634 REXO1Q8N1G1 1221 aaKnown RBP13.73□□□□□ -0.21
VPS13A-204ENST00000376634 EFCC1Q9HA90 598 aa13.73□□□□□ -0.21
VPS13A-204ENST00000376634 RNF40O75150 1001 aa13.73□□□□□ -0.21
VPS13A-204ENST00000376634 S100BP04271 92 aaPredicted RBP13.73□□□□□ -0.21
VPS13A-204ENST00000376634 GRK7Q8WTQ7 553 aa13.73□□□□□ -0.21
VPS13A-204ENST00000376634 SPC25Q9HBM1 224 aa13.73□□□□□ -0.21
VPS13A-204ENST00000376634 KCNG1Q9UIX4 513 aa13.73□□□□□ -0.21
VPS13A-204ENST00000376634 KLHL7Q8IXQ5 586 aa13.73□□□□□ -0.21
VPS13A-204ENST00000376634 DDX41Q9UJV9 622 aaKnown RBP13.73□□□□□ -0.21
VPS13A-204ENST00000376634 TNRQ92752 1358 aa13.73□□□□□ -0.21
VPS13A-204ENST00000376634 PALM2Q8IXS6 379 aa13.73□□□□□ -0.21
VPS13A-204ENST00000376634 PSMB7Q99436 277 aa13.73□□□□□ -0.21
VPS13A-204ENST00000376634 SESN3P58005 492 aa13.72□□□□□ -0.21
VPS13A-204ENST00000376634 CTAGE3PQ8IX95 158 aa13.72□□□□□ -0.21
VPS13A-204ENST00000376634 MICAL1Q8TDZ2 1067 aa13.72□□□□□ -0.21
VPS13A-204ENST00000376634 CABS1Q96KC9 395 aa13.72□□□□□ -0.21
VPS13A-204ENST00000376634 EIF6P56537 245 aaKnown RBP13.72□□□□□ -0.21
VPS13A-204ENST00000376634 SPECC1L-ADORA2AF8WAN1 911 aa13.72□□□□□ -0.21
VPS13A-204ENST00000376634 YARSP54577 528 aaKnown RBP13.72□□□□□ -0.21
VPS13A-204ENST00000376634 SLC5A4Q9NY91 659 aa13.72□□□□□ -0.21
VPS13A-204ENST00000376634 ELF2Q15723 593 aa13.72□□□□□ -0.21
VPS13A-204ENST00000376634 CCDC93Q567U6 631 aa13.72□□□□□ -0.21
VPS13A-204ENST00000376634 PDZD4Q76G19 769 aaPredicted RBP13.72□□□□□ -0.21
VPS13A-204ENST00000376634 AMFRQ9UKV5 643 aa13.72□□□□□ -0.21
VPS13A-204ENST00000376634 ZNF202O95125 648 aa13.72□□□□□ -0.21
VPS13A-204ENST00000376634 LINS1Q8NG48 757 aa13.72□□□□□ -0.21
VPS13A-204ENST00000376634 KLHL14Q9P2G3 628 aa13.72□□□□□ -0.21
VPS13A-204ENST00000376634 THAP12O43422 761 aa13.72□□□□□ -0.21
VPS13A-204ENST00000376634 MMEL1Q495T6 779 aa13.72□□□□□ -0.21
VPS13A-204ENST00000376634 HERC4Q5GLZ8 1057 aaPredicted RBP13.72□□□□□ -0.21
VPS13A-204ENST00000376634 LRCH2Q5VUJ6 765 aa13.72□□□□□ -0.21
VPS13A-204ENST00000376634 NFATC2IPQ8NCF5 419 aa13.72□□□□□ -0.21
VPS13A-204ENST00000376634 XRCC5P13010 732 aaKnown RBP13.72□□□□□ -0.21
VPS13A-204ENST00000376634 GABPB1Q06547 395 aaPredicted RBP13.72□□□□□ -0.21
VPS13A-204ENST00000376634 LONRF3Q496Y0 759 aa13.72□□□□□ -0.21
VPS13A-204ENST00000376634 OTUD6AQ7L8S5 288 aa13.72□□□□□ -0.21
VPS13A-204ENST00000376634 RASEFQ8IZ41 740 aa13.72□□□□□ -0.21
VPS13A-204ENST00000376634 KLHL30Q0D2K2 578 aa13.72□□□□□ -0.21
VPS13A-204ENST00000376634 DMP1Q13316 513 aaPredicted RBP13.72□□□□□ -0.21
VPS13A-204ENST00000376634 C4orf50Q6ZRC1 276 aa13.71□□□□□ -0.21
VPS13A-204ENST00000376634 YTHDC2Q9H6S0 1430 aaKnown RBP13.71□□□□□ -0.21
VPS13A-204ENST00000376634 ITKQ08881 620 aa13.71□□□□□ -0.21
VPS13A-204ENST00000376634 TRAPPC3LQ5T215 181 aa13.71□□□□□ -0.21
VPS13A-204ENST00000376634 ZMAT2Q96NC0 199 aaKnown RBP13.71□□□□□ -0.21
VPS13A-204ENST00000376634 FAF1Q9UNN5 650 aaPredicted RBP13.71□□□□□ -0.21
VPS13A-204ENST00000376634 TYW5A2RUC4 315 aaKnown RBP13.71□□□□□ -0.21
VPS13A-204ENST00000376634 B4E1Z4 1266 aa13.71□□□□□ -0.21
VPS13A-204ENST00000376634 FANCCQ00597 558 aa13.71□□□□□ -0.21
VPS13A-204ENST00000376634 KRT25Q7Z3Z0 450 aa13.71□□□□□ -0.21
VPS13A-204ENST00000376634 HELBQ8NG08 1087 aaPredicted RBP13.71□□□□□ -0.21
VPS13A-204ENST00000376634 FAM71BQ8TC56 605 aa13.71□□□□□ -0.21
VPS13A-204ENST00000376634 SEPT8Q92599 483 aa13.71□□□□□ -0.21
VPS13A-204ENST00000376634 CAPN9O14815 690 aa13.71□□□□□ -0.21
VPS13A-204ENST00000376634 LMNB1P20700 586 aa13.71□□□□□ -0.21
VPS13A-204ENST00000376634 SERPINB6P35237 376 aa13.71□□□□□ -0.21
VPS13A-204ENST00000376634 CDR2Q01850 454 aa13.71□□□□□ -0.21
VPS13A-204ENST00000376634 ZMYM4Q5VZL5 1548 aa13.71□□□□□ -0.21
VPS13A-204ENST00000376634 ATF7P17544 494 aaPredicted RBP13.71□□□□□ -0.21
VPS13A-204ENST00000376634 IWS1Q96ST2 819 aa13.71□□□□□ -0.21
VPS13A-204ENST00000376634 MIS12Q9H081 205 aa13.71□□□□□ -0.21
VPS13A-204ENST00000376634 ADGRF5Q8IZF2 1346 aa13.71□□□□□ -0.21
VPS13A-204ENST00000376634 PLB1Q6P1J6 1458 aa13.71□□□□□ -0.22
VPS13A-204ENST00000376634 RINT1Q6NUQ1 792 aa13.71□□□□□ -0.22
VPS13A-204ENST00000376634 RPGRIP1Q96KN7 1286 aa13.71□□□□□ -0.22
VPS13A-204ENST00000376634 ST7Q9NRC1 585 aa13.71□□□□□ -0.22
VPS13A-204ENST00000376634 TYW1Q9NV66 732 aaKnown RBP13.71□□□□□ -0.22
VPS13A-204ENST00000376634 MYO18AQ92614 2054 aaKnown RBP13.71□□□□□ -0.22
VPS13A-204ENST00000376634 HIP1RO75146 1068 aa13.71□□□□□ -0.22
VPS13A-204ENST00000376634 GAS7O60861 476 aa13.71□□□□□ -0.22
VPS13A-204ENST00000376634 UHRF1BP1LA0JNW5 1464 aa13.7□□□□□ -0.22
VPS13A-204ENST00000376634 IGSF3O75054 1194 aa13.7□□□□□ -0.22
VPS13A-204ENST00000376634 IFNB1P01574 187 aa13.7□□□□□ -0.22
VPS13A-204ENST00000376634 SNX29Q8TEQ0 813 aa13.7□□□□□ -0.22
VPS13A-204ENST00000376634 MYO1AQ9UBC5 1043 aa13.7□□□□□ -0.22
VPS13A-204ENST00000376634 RIMS2Q9UQ26 1411 aa13.7□□□□□ -0.22
VPS13A-204ENST00000376634 C2CD5Q86YS7 1000 aa13.7□□□□□ -0.22
VPS13A-204ENST00000376634 PDE4DIPQ5VU43 2346 aa13.7□□□□□ -0.22
VPS13A-204ENST00000376634 ZBED4O75132 1171 aa13.7□□□□□ -0.22
VPS13A-204ENST00000376634 SLC8A1P32418 973 aa13.7□□□□□ -0.22
VPS13A-204ENST00000376634 CTNNA1P35221 906 aaKnown RBP13.7□□□□□ -0.22
VPS13A-204ENST00000376634 TYW1BQ6NUM6 668 aa13.7□□□□□ -0.22
VPS13A-204ENST00000376634 DRC3Q9H069 523 aa13.7□□□□□ -0.22
VPS13A-204ENST00000376634 RAB20Q9NX57 234 aa13.7□□□□□ -0.22
VPS13A-204ENST00000376634 GGA1Q9UJY5 639 aa13.7□□□□□ -0.22
VPS13A-204ENST00000376634 TXKP42681 527 aa13.7□□□□□ -0.22
VPS13A-204ENST00000376634 MLKLQ8NB16 471 aa13.7□□□□□ -0.22
VPS13A-204ENST00000376634 MORC4Q8TE76 937 aa13.7□□□□□ -0.22
VPS13A-204ENST00000376634 ARHGAP6O43182 974 aa13.7□□□□□ -0.22
VPS13A-204ENST00000376634 GOLGA5Q8TBA6 731 aa13.7□□□□□ -0.22
VPS13A-204ENST00000376634 SMCR8Q8TEV9 937 aaPredicted RBP13.7□□□□□ -0.22
VPS13A-204ENST00000376634 AATFQ9NY61 560 aaKnown RBP eCLIP13.7□□□□□ -0.22
VPS13A-204ENST00000376634 ZC4H2Q9NQZ6 224 aa13.7□□□□□ -0.22
VPS13A-204ENST00000376634 WWC3Q9ULE0 1092 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms