RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 PPP2R5BQ15173 497 aa24.66■■□□□ 1.54
HLA-C-201ENST00000376228 NFXL1Q6ZNB6 911 aa24.66■■□□□ 1.54
HLA-C-201ENST00000376228 ZSCAN10Q96SZ4 725 aaPredicted RBP24.66■■□□□ 1.54
HLA-C-201ENST00000376228 SENP2Q9HC62 589 aa24.66■■□□□ 1.54
HLA-C-201ENST00000376228 SLC12A7Q9Y666 1083 aa24.66■■□□□ 1.54
HLA-C-201ENST00000376228 SIPA1L1O43166 1804 aa24.65■■□□□ 1.54
HLA-C-201ENST00000376228 FLT1P17948 1338 aa24.65■■□□□ 1.54
HLA-C-201ENST00000376228 TRAK2O60296 914 aa24.65■■□□□ 1.54
HLA-C-201ENST00000376228 MCTP1Q6DN14 999 aa24.65■■□□□ 1.54
HLA-C-201ENST00000376228 SYNE3Q6ZMZ3 975 aa24.65■■□□□ 1.54
HLA-C-201ENST00000376228 REM2Q8IYK8 340 aaPredicted RBP24.65■■□□□ 1.54
HLA-C-201ENST00000376228 OTUD5Q96G74 571 aa24.65■■□□□ 1.54
HLA-C-201ENST00000376228 OSBPL5Q9H0X9 879 aaPredicted RBP24.65■■□□□ 1.54
HLA-C-201ENST00000376228 PRDM10Q9NQV6 1147 aa24.65■■□□□ 1.54
HLA-C-201ENST00000376228 CDKL5O76039 1030 aa24.64■■□□□ 1.53
HLA-C-201ENST00000376228 TM4SF4P48230 202 aa24.64■■□□□ 1.53
HLA-C-201ENST00000376228 SREBF2Q12772 1141 aa24.64■■□□□ 1.53
HLA-C-201ENST00000376228 FOXD4L5Q5VV16 416 aaPredicted RBP24.64■■□□□ 1.53
HLA-C-201ENST00000376228 CPLX2Q6PUV4 134 aaKnown RBP24.64■■□□□ 1.53
HLA-C-201ENST00000376228 MAPKAPK5Q8IW41 473 aa24.64■■□□□ 1.53
HLA-C-201ENST00000376228 FOXD4L4Q8WXT5 416 aaPredicted RBP24.64■■□□□ 1.53
HLA-C-201ENST00000376228 ZNF287Q9HBT7 754 aa24.64■■□□□ 1.53
HLA-C-201ENST00000376228 LMBRD1Q9NUN5 540 aa24.64■■□□□ 1.53
HLA-C-201ENST00000376228 TNKSO95271 1327 aa24.63■■□□□ 1.53
HLA-C-201ENST00000376228 CPLX1O14810 134 aa24.63■■□□□ 1.53
HLA-C-201ENST00000376228 RANBP6O60518 1105 aaKnown RBP24.63■■□□□ 1.53
HLA-C-201ENST00000376228 CCDC178Q5BJE1 867 aa24.63■■□□□ 1.53
HLA-C-201ENST00000376228 SAGE1Q9NXZ1 904 aa24.63■■□□□ 1.53
HLA-C-201ENST00000376228 DOCK1Q14185 1865 aa24.62■■□□□ 1.53
HLA-C-201ENST00000376228 VPS37CA5D8V6 355 aaPredicted RBP24.62■■□□□ 1.53
HLA-C-201ENST00000376228 MANSC4A6NHS7 340 aaPredicted RBP24.62■■□□□ 1.53
HLA-C-201ENST00000376228 FAM196BA6NMK8 535 aa24.62■■□□□ 1.53
HLA-C-201ENST00000376228 NPM3O75607 178 aaKnown RBP24.62■■□□□ 1.53
HLA-C-201ENST00000376228 POLR3DP05423 398 aaPredicted RBP24.62■■□□□ 1.53
HLA-C-201ENST00000376228 FDPSP14324 419 aaKnown RBP24.62■■□□□ 1.53
HLA-C-201ENST00000376228 STK11IPQ8N1F8 1099 aa24.62■■□□□ 1.53
HLA-C-201ENST00000376228 ENAHQ8N8S7 591 aaPredicted RBP24.62■■□□□ 1.53
HLA-C-201ENST00000376228 DDX11Q96FC9 970 aa24.62■■□□□ 1.53
HLA-C-201ENST00000376228 FAM217BQ9NTX9 383 aaPredicted RBP24.62■■□□□ 1.53
HLA-C-201ENST00000376228 ATAD5Q96QE3 1844 aa24.62■■□□□ 1.53
HLA-C-201ENST00000376228 EVX2Q03828 476 aa24.61■■□□□ 1.53
HLA-C-201ENST00000376228 NTRK3Q16288 839 aa24.61■■□□□ 1.53
HLA-C-201ENST00000376228 TMEM87AQ8NBN3 555 aa24.61■■□□□ 1.53
HLA-C-201ENST00000376228 ZKSCAN3Q9BRR0 538 aa24.61■■□□□ 1.53
HLA-C-201ENST00000376228 TCP11L1Q9NUJ3 509 aa24.61■■□□□ 1.53
HLA-C-201ENST00000376228 ZNF112Q9UJU3 913 aa24.61■■□□□ 1.53
HLA-C-201ENST00000376228 COL2A1P02458 1487 aaPredicted RBP24.61■■□□□ 1.53
HLA-C-201ENST00000376228 SPDYE5A6NIY4 337 aa24.61■■□□□ 1.53
HLA-C-201ENST00000376228 GOLGA8AA7E2F4 631 aa24.61■■□□□ 1.53
HLA-C-201ENST00000376228 PRDM1O75626 825 aa24.61■■□□□ 1.53
HLA-C-201ENST00000376228 C16orf86Q6ZW13 317 aa24.61■■□□□ 1.53
HLA-C-201ENST00000376228 ANKS1AQ92625 1134 aa24.61■■□□□ 1.53
HLA-C-201ENST00000376228 MYH15Q9Y2K3 1946 aa24.6■■□□□ 1.53
HLA-C-201ENST00000376228 CCDC196A0A1B0GTZ2 297 aa24.6■■□□□ 1.53
HLA-C-201ENST00000376228 PHF20L1A8MW92 1017 aa24.6■■□□□ 1.53
HLA-C-201ENST00000376228 IGF2BP3O00425 579 aaKnown RBP eCLIP24.6■■□□□ 1.53
HLA-C-201ENST00000376228 DTNBO60941 627 aa24.6■■□□□ 1.53
HLA-C-201ENST00000376228 TBC1D8O95759 1140 aa24.6■■□□□ 1.53
HLA-C-201ENST00000376228 CDC27P30260 824 aa24.6■■□□□ 1.53
HLA-C-201ENST00000376228 PLCD1P51178 756 aa24.6■■□□□ 1.53
HLA-C-201ENST00000376228 SLC4A8Q2Y0W8 1093 aa24.6■■□□□ 1.53
HLA-C-201ENST00000376228 MICU3Q86XE3 530 aa24.6■■□□□ 1.53
HLA-C-201ENST00000376228 ERO1BQ86YB8 467 aa24.6■■□□□ 1.53
HLA-C-201ENST00000376228 ZNF654Q8IZM8 581 aa24.6■■□□□ 1.53
HLA-C-201ENST00000376228 ZSCAN16Q9H4T2 348 aaPredicted RBP24.6■■□□□ 1.53
HLA-C-201ENST00000376228 TAOK2Q9UL54 1235 aa24.6■■□□□ 1.53
HLA-C-201ENST00000376228 STK36Q9NRP7 1315 aa24.59■■□□□ 1.53
HLA-C-201ENST00000376228 CALM1P0DP23 149 aa24.59■■□□□ 1.53
HLA-C-201ENST00000376228 CALM2P0DP24 149 aa24.59■■□□□ 1.53
HLA-C-201ENST00000376228 CALM3P0DP25 149 aa24.59■■□□□ 1.53
HLA-C-201ENST00000376228 ADD1P35611 737 aaKnown RBP24.59■■□□□ 1.53
HLA-C-201ENST00000376228 IFNL1Q8IU54 200 aa24.59■■□□□ 1.53
HLA-C-201ENST00000376228 ORC3Q9UBD5 711 aaPredicted RBP24.59■■□□□ 1.53
HLA-C-201ENST00000376228 SAP30BPQ9UHR5 308 aaKnown RBP24.59■■□□□ 1.53
HLA-C-201ENST00000376228 H3BQV1 296 aa24.58■■□□□ 1.53
HLA-C-201ENST00000376228 IFNAR1P17181 557 aa24.58■■□□□ 1.53
HLA-C-201ENST00000376228 IFIT1BQ5T764 474 aaKnown RBP24.58■■□□□ 1.53
HLA-C-201ENST00000376228 IFFO2Q5TF58 517 aa24.58■■□□□ 1.53
HLA-C-201ENST00000376228 TTC6Q86TZ1 520 aa24.58■■□□□ 1.53
HLA-C-201ENST00000376228 DGKHQ86XP1 1220 aa24.58■■□□□ 1.53
HLA-C-201ENST00000376228 TNS4Q8IZW8 715 aa24.58■■□□□ 1.53
HLA-C-201ENST00000376228 MS4A4AQ96JQ5 239 aa24.58■■□□□ 1.53
HLA-C-201ENST00000376228 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.58■■□□□ 1.53
HLA-C-201ENST00000376228 PHIPQ8WWQ0 1821 aa24.57■■□□□ 1.52
HLA-C-201ENST00000376228 TSPY2A6NKD2 308 aa24.57■■□□□ 1.52
HLA-C-201ENST00000376228 IRF6O14896 467 aa24.57■■□□□ 1.52
HLA-C-201ENST00000376228 DDAH1O94760 285 aa24.57■■□□□ 1.52
HLA-C-201ENST00000376228 KLHL40Q2TBA0 621 aa24.57■■□□□ 1.52
HLA-C-201ENST00000376228 FANCBQ8NB91 859 aa24.57■■□□□ 1.52
HLA-C-201ENST00000376228 DYNLL2Q96FJ2 89 aa24.57■■□□□ 1.52
HLA-C-201ENST00000376228 PTPN18Q99952 460 aa24.57■■□□□ 1.52
HLA-C-201ENST00000376228 MKNK2Q9HBH9 465 aa24.57■■□□□ 1.52
HLA-C-201ENST00000376228 MYH8P13535 1937 aa24.57■■□□□ 1.52
HLA-C-201ENST00000376228 INHBEP58166 350 aa24.56■■□□□ 1.52
HLA-C-201ENST00000376228 MAP3K10Q02779 954 aa24.56■■□□□ 1.52
HLA-C-201ENST00000376228 RESTQ13127 1097 aa24.56■■□□□ 1.52
HLA-C-201ENST00000376228 RTN1Q16799 776 aa24.56■■□□□ 1.52
HLA-C-201ENST00000376228 NOL9Q5SY16 702 aaKnown RBP24.56■■□□□ 1.52
HLA-C-201ENST00000376228 ZNF444Q8N0Y2 327 aaPredicted RBP24.56■■□□□ 1.52
HLA-C-201ENST00000376228 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms