RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 MIGA2Q7L4E1 593 aa12.2□□□□□ -0.46
PDPN-203ENST00000376061 FANCBQ8NB91 859 aa12.2□□□□□ -0.46
PDPN-203ENST00000376061 PPP2R3BQ9Y5P8 575 aa12.2□□□□□ -0.46
PDPN-203ENST00000376061 PPFIA3O75145 1194 aa12.19□□□□□ -0.46
PDPN-203ENST00000376061 TTLL1O95922 423 aa12.19□□□□□ -0.46
PDPN-203ENST00000376061 GH2P01242 217 aa12.19□□□□□ -0.46
PDPN-203ENST00000376061 HMGN5P82970 282 aaKnown RBP12.19□□□□□ -0.46
PDPN-203ENST00000376061 SEPT2Q15019 361 aa12.19□□□□□ -0.46
PDPN-203ENST00000376061 NTRK3Q16288 839 aa12.19□□□□□ -0.46
PDPN-203ENST00000376061 NBPF12Q5TAG4 269 aaPredicted RBP12.19□□□□□ -0.46
PDPN-203ENST00000376061 USP50Q70EL3 339 aaPredicted RBP12.19□□□□□ -0.46
PDPN-203ENST00000376061 LRRC47Q8N1G4 583 aaKnown RBP12.19□□□□□ -0.46
PDPN-203ENST00000376061 DDX11Q96FC9 970 aa12.19□□□□□ -0.46
PDPN-203ENST00000376061 TAF1DQ9H5J8 278 aaPredicted RBP12.19□□□□□ -0.46
PDPN-203ENST00000376061 ZBTB21Q9ULJ3 1066 aa12.19□□□□□ -0.46
PDPN-203ENST00000376061 MYH15Q9Y2K3 1946 aa12.19□□□□□ -0.46
PDPN-203ENST00000376061 STK36Q9NRP7 1315 aa12.19□□□□□ -0.46
PDPN-203ENST00000376061 PHIPQ8WWQ0 1821 aa12.19□□□□□ -0.46
PDPN-203ENST00000376061 CCDC196A0A1B0GTZ2 297 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 IQCA1LA6NCM1 817 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 PHF20L1A8MW92 1017 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 POTECB2RU33 542 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 CDKL5O76039 1030 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 ICA1Q05084 483 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 GRM4Q14833 912 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 RAB3GAP1Q15042 981 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 PPP2R5BQ15173 497 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 PPP4R3BQ5MIZ7 849 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 CPLX2Q6PUV4 134 aaKnown RBP12.18□□□□□ -0.46
PDPN-203ENST00000376061 RASGRP2Q7LDG7 609 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 CTCFLQ8NI51 663 aaPredicted RBP12.18□□□□□ -0.46
PDPN-203ENST00000376061 MAP3K14Q99558 947 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 KANSL2Q9H9L4 492 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 RBM28Q9NW13 759 aaKnown RBP12.18□□□□□ -0.46
PDPN-203ENST00000376061 SPDYE4A6NLX3 237 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 ADM5C9JUS6 153 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 PLEKHA8P1O95397 391 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 EEF2P13639 858 aaKnown RBP12.18□□□□□ -0.46
PDPN-203ENST00000376061 FDPSP14324 419 aaKnown RBP12.18□□□□□ -0.46
PDPN-203ENST00000376061 IFNAR1P17181 557 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 SYT1P21579 422 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 NUCB2P80303 420 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 PRAMEF18Q5VWM3 479 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 TMTC3Q6ZXV5 915 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 PHKBQ93100 1093 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 DCPSQ96C86 337 aaKnown RBP12.18□□□□□ -0.46
PDPN-203ENST00000376061 HOOK2Q96ED9 719 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 CABP5Q9NP86 173 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 NYAP2Q9P242 653 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 ORC3Q9UBD5 711 aaPredicted RBP12.18□□□□□ -0.46
PDPN-203ENST00000376061 CLIP2Q9UDT6 1046 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 ZDHHC9Q9Y397 364 aa12.18□□□□□ -0.46
PDPN-203ENST00000376061 CNTNAP5Q8WYK1 1306 aa12.17□□□□□ -0.46
PDPN-203ENST00000376061 STX6O43752 255 aa12.17□□□□□ -0.46
PDPN-203ENST00000376061 FMNL1O95466 1100 aaPredicted RBP12.17□□□□□ -0.46
PDPN-203ENST00000376061 BRD1O95696 1058 aa12.17□□□□□ -0.46
PDPN-203ENST00000376061 PDCP20941 246 aa12.17□□□□□ -0.46
PDPN-203ENST00000376061 KIF5BP33176 963 aa12.17□□□□□ -0.46
PDPN-203ENST00000376061 CAP2P40123 477 aa12.17□□□□□ -0.46
PDPN-203ENST00000376061 ATP2B2Q01814 1243 aa12.17□□□□□ -0.46
PDPN-203ENST00000376061 FUT2Q10981 343 aa12.17□□□□□ -0.46
PDPN-203ENST00000376061 DCAF15Q66K64 600 aa12.17□□□□□ -0.46
PDPN-203ENST00000376061 NBPF11Q86T75 865 aa12.17□□□□□ -0.46
PDPN-203ENST00000376061 SIAH1Q8IUQ4 282 aa12.17□□□□□ -0.46
PDPN-203ENST00000376061 SULF1Q8IWU6 871 aa12.17□□□□□ -0.46
PDPN-203ENST00000376061 CMTR1Q8N1G2 835 aaKnown RBP12.17□□□□□ -0.46
PDPN-203ENST00000376061 FAM184AQ8NB25 1140 aa12.17□□□□□ -0.46
PDPN-203ENST00000376061 ZC3H15Q8WU90 426 aaKnown RBP12.17□□□□□ -0.46
PDPN-203ENST00000376061 ZNF341Q9BYN7 854 aa12.17□□□□□ -0.46
PDPN-203ENST00000376061 MTMR7Q9Y216 660 aa12.17□□□□□ -0.46
PDPN-203ENST00000376061 MTMR6Q9Y217 621 aa12.17□□□□□ -0.46
PDPN-203ENST00000376061 KIF3AQ9Y496 699 aa12.17□□□□□ -0.46
PDPN-203ENST00000376061 BAZ2BQ9UIF8 2168 aaKnown RBP12.17□□□□□ -0.46
PDPN-203ENST00000376061 WDR33Q9C0J8 1336 aaKnown RBP12.16□□□□□ -0.46
PDPN-203ENST00000376061 PALM3A6NDB9 673 aaPredicted RBP12.16□□□□□ -0.46
PDPN-203ENST00000376061 SNHG28P0DPA3 235 aa12.16□□□□□ -0.46
PDPN-203ENST00000376061 PDHBP11177 359 aa12.16□□□□□ -0.46
PDPN-203ENST00000376061 LARP1BQ659C4 914 aaKnown RBP12.16□□□□□ -0.46
PDPN-203ENST00000376061 KRT26Q7Z3Y9 468 aa12.16□□□□□ -0.46
PDPN-203ENST00000376061 MKL1Q969V6 931 aa12.16□□□□□ -0.46
PDPN-203ENST00000376061 SLC26A6Q9BXS9 759 aa12.16□□□□□ -0.46
PDPN-203ENST00000376061 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.16□□□□□ -0.46
PDPN-203ENST00000376061 MAD2L2Q9UI95 211 aa12.16□□□□□ -0.46
PDPN-203ENST00000376061 VPS37CA5D8V6 355 aaPredicted RBP12.15□□□□□ -0.46
PDPN-203ENST00000376061 USP17L5A8MUK1 530 aa12.15□□□□□ -0.46
PDPN-203ENST00000376061 UBE2Q2LH0YL09 131 aa12.15□□□□□ -0.46
PDPN-203ENST00000376061 ASNSP08243 561 aa12.15□□□□□ -0.46
PDPN-203ENST00000376061 PARP1P09874 1014 aaKnown RBP12.15□□□□□ -0.46
PDPN-203ENST00000376061 INPP5BP32019 993 aa12.15□□□□□ -0.46
PDPN-203ENST00000376061 FOSBP53539 338 aa12.15□□□□□ -0.46
PDPN-203ENST00000376061 SSRP1Q08945 709 aaKnown RBP12.15□□□□□ -0.46
PDPN-203ENST00000376061 SUPT20HL1Q3ZLR7 823 aa12.15□□□□□ -0.46
PDPN-203ENST00000376061 EAPPQ56P03 285 aaPredicted RBP12.15□□□□□ -0.46
PDPN-203ENST00000376061 DLK2Q6UY11 383 aa12.15□□□□□ -0.46
PDPN-203ENST00000376061 CDC37L1Q7L3B6 337 aa12.15□□□□□ -0.46
PDPN-203ENST00000376061 PNMA8AQ86V59 439 aaPredicted RBP12.15□□□□□ -0.46
PDPN-203ENST00000376061 TRIM22Q8IYM9 498 aa12.15□□□□□ -0.46
PDPN-203ENST00000376061 STAG2Q8N3U4 1231 aa12.15□□□□□ -0.46
PDPN-203ENST00000376061 SRBD1Q8N5C6 995 aaKnown RBP12.15□□□□□ -0.46
PDPN-203ENST00000376061 TNPO1Q92973 898 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms