RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 PDE11AQ9HCR9 933 aa16.04■□□□□ 0.16
CLCNKA-202ENST00000375692 hCG_1642624A0A1W2PR95 340 aa16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 KIF5CO60282 957 aa16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 PDE8BO95263 885 aa16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 NTSR2O95665 410 aa16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 ERCC5P28715 1186 aaPredicted RBP16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 CASP14P31944 242 aa16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 CTSWP56202 376 aa16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 GPS2Q13227 327 aa16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 ZSCAN26Q16670 478 aa16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 AKNAD1Q5T1N1 836 aa16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 MFSD6Q6ZSS7 791 aa16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 TRIML1Q8N9V2 468 aa16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 STAMQ92783 540 aa16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 NARFQ9UHQ1 456 aa16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 CICQ96RK0 1608 aaPredicted RBP16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 CDHR2Q9BYE9 1310 aa16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 ANKRD18BA2A2Z9 1011 aa16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 MAP2K7O14733 419 aa16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 ZPR1O75312 459 aa16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 KIF4BQ2VIQ3 1234 aa16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 EARS2Q5JPH6 523 aaKnown RBP16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 ZNF579Q8NAF0 562 aaKnown RBP16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 ACRBPQ8NEB7 543 aa16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 SHISA4Q96DD7 197 aa16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 CDC5LQ99459 802 aaKnown RBP16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 ADD3Q9UEY8 706 aaKnown RBP16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 CDC23Q9UJX2 597 aa16.03■□□□□ 0.16
CLCNKA-202ENST00000375692 GSG1L2A8MUP6 293 aa16.02■□□□□ 0.16
CLCNKA-202ENST00000375692 N4BP1O75113 896 aaKnown RBP16.02■□□□□ 0.16
CLCNKA-202ENST00000375692 RHOXF2BP0C7M4 288 aa16.02■□□□□ 0.16
CLCNKA-202ENST00000375692 FXR1P51114 621 aaKnown RBP eCLIP16.02■□□□□ 0.16
CLCNKA-202ENST00000375692 WTAPQ15007 396 aa16.02■□□□□ 0.16
CLCNKA-202ENST00000375692 BRD3Q15059 726 aa16.02■□□□□ 0.16
CLCNKA-202ENST00000375692 BEND6Q5SZJ8 279 aaPredicted RBP16.02■□□□□ 0.16
CLCNKA-202ENST00000375692 TRAPPC3LQ5T215 181 aa16.02■□□□□ 0.16
CLCNKA-202ENST00000375692 SPATA1Q5VX52 437 aa16.02■□□□□ 0.16
CLCNKA-202ENST00000375692 CLEC4GQ6UXB4 293 aa16.02■□□□□ 0.16
CLCNKA-202ENST00000375692 ZNF512BQ96KM6 892 aaPredicted RBP16.02■□□□□ 0.16
CLCNKA-202ENST00000375692 RHOXF2Q9BQY4 288 aa16.02■□□□□ 0.16
CLCNKA-202ENST00000375692 LY75O60449 1722 aa16.02■□□□□ 0.15
CLCNKA-202ENST00000375692 PDE8AO60658 829 aa16.02■□□□□ 0.15
CLCNKA-202ENST00000375692 RFC4P35249 363 aa16.02■□□□□ 0.15
CLCNKA-202ENST00000375692 CUL4BQ13620 913 aa16.02■□□□□ 0.15
CLCNKA-202ENST00000375692 ALX1Q15699 326 aa16.02■□□□□ 0.15
CLCNKA-202ENST00000375692 ERFEQ4G0M1 354 aa16.02■□□□□ 0.15
CLCNKA-202ENST00000375692 C3orf67Q6ZVT6 689 aa16.02■□□□□ 0.15
CLCNKA-202ENST00000375692 SLC35F6Q8N357 371 aa16.02■□□□□ 0.15
CLCNKA-202ENST00000375692 ZNF652Q9Y2D9 606 aa16.02■□□□□ 0.15
CLCNKA-202ENST00000375692 SYNRGQ9UMZ2 1314 aa16.01■□□□□ 0.15
CLCNKA-202ENST00000375692 WNT7AO00755 349 aa16.01■□□□□ 0.15
CLCNKA-202ENST00000375692 CDC25AP30304 524 aa16.01■□□□□ 0.15
CLCNKA-202ENST00000375692 CCT6AP40227 531 aaKnown RBP16.01■□□□□ 0.15
CLCNKA-202ENST00000375692 PBX1P40424 430 aa16.01■□□□□ 0.15
CLCNKA-202ENST00000375692 JAKMIP3Q5VZ66 844 aa16.01■□□□□ 0.15
CLCNKA-202ENST00000375692 KANK3Q6NY19 840 aa16.01■□□□□ 0.15
CLCNKA-202ENST00000375692 PAGE5Q96GU1 130 aa16.01■□□□□ 0.15
CLCNKA-202ENST00000375692 ABCB6Q9NP58 842 aa16.01■□□□□ 0.15
CLCNKA-202ENST00000375692 VPS18Q9P253 973 aa16.01■□□□□ 0.15
CLCNKA-202ENST00000375692 FEZ2Q9UHY8 353 aaPredicted RBP16.01■□□□□ 0.15
CLCNKA-202ENST00000375692 ZNF831Q5JPB2 1677 aa16.01■□□□□ 0.15
CLCNKA-202ENST00000375692 SMIM22K7EJ46 135 aa16.01■□□□□ 0.15
CLCNKA-202ENST00000375692 RNF225M0QZC1 329 aaPredicted RBP16.01■□□□□ 0.15
CLCNKA-202ENST00000375692 MFAP3LO75121 409 aa16.01■□□□□ 0.15
CLCNKA-202ENST00000375692 DEXIO95424 95 aa16.01■□□□□ 0.15
CLCNKA-202ENST00000375692 ZFP91Q96JP5 570 aaPredicted RBP16.01■□□□□ 0.15
CLCNKA-202ENST00000375692 LCMT1Q9UIC8 334 aa16.01■□□□□ 0.15
CLCNKA-202ENST00000375692 PRDM1O75626 825 aa16■□□□□ 0.15
CLCNKA-202ENST00000375692 GYPCP04921 128 aa16■□□□□ 0.15
CLCNKA-202ENST00000375692 ARID4AP29374 1257 aaPredicted RBP16■□□□□ 0.15
CLCNKA-202ENST00000375692 TDO2P48775 406 aa16■□□□□ 0.15
CLCNKA-202ENST00000375692 DPYDQ12882 1025 aa16■□□□□ 0.15
CLCNKA-202ENST00000375692 PARP10Q53GL7 1025 aa16■□□□□ 0.15
CLCNKA-202ENST00000375692 MUM1L1Q5H9M0 696 aa16■□□□□ 0.15
CLCNKA-202ENST00000375692 RASGRP2Q7LDG7 609 aa16■□□□□ 0.15
CLCNKA-202ENST00000375692 LCORLQ8N3X6 602 aa16■□□□□ 0.15
CLCNKA-202ENST00000375692 SPATA5Q8NB90 893 aa16■□□□□ 0.15
CLCNKA-202ENST00000375692 FANCBQ8NB91 859 aa16■□□□□ 0.15
CLCNKA-202ENST00000375692 VPS54Q9P1Q0 977 aa16■□□□□ 0.15
CLCNKA-202ENST00000375692 NOM1Q5C9Z4 860 aaKnown RBP16■□□□□ 0.15
CLCNKA-202ENST00000375692 CDKAL1Q5VV42 579 aa16■□□□□ 0.15
CLCNKA-202ENST00000375692 CEP112Q8N8E3 955 aa16■□□□□ 0.15
CLCNKA-202ENST00000375692 SYMPKQ92797 1274 aaKnown RBP16■□□□□ 0.15
CLCNKA-202ENST00000375692 KRT23Q9C075 422 aa16■□□□□ 0.15
CLCNKA-202ENST00000375692 CNNM2Q9H8M5 875 aa16■□□□□ 0.15
CLCNKA-202ENST00000375692 TAF1LQ8IZX4 1826 aa16■□□□□ 0.15
CLCNKA-202ENST00000375692 ANKRD36CQ5JPF3 1778 aa15.99■□□□□ 0.15
CLCNKA-202ENST00000375692 PPP1R3GB7ZBB8 358 aa15.99■□□□□ 0.15
CLCNKA-202ENST00000375692 RASGRF1Q13972 1273 aa15.99■□□□□ 0.15
CLCNKA-202ENST00000375692 MIGA1Q8NAN2 632 aa15.99■□□□□ 0.15
CLCNKA-202ENST00000375692 EXOC4Q96A65 974 aa15.99■□□□□ 0.15
CLCNKA-202ENST00000375692 CEP131Q9UPN4 1083 aa15.99■□□□□ 0.15
CLCNKA-202ENST00000375692 SLC4A4Q9Y6R1 1079 aa15.99■□□□□ 0.15
CLCNKA-202ENST00000375692 CTAGE9A4FU28 777 aa15.99■□□□□ 0.15
CLCNKA-202ENST00000375692 TRIM75PA6NK02 468 aa15.99■□□□□ 0.15
CLCNKA-202ENST00000375692 SLC27A3Q5K4L6 730 aa15.99■□□□□ 0.15
CLCNKA-202ENST00000375692 ZNF654Q8IZM8 581 aa15.99■□□□□ 0.15
CLCNKA-202ENST00000375692 NAA15Q9BXJ9 866 aaKnown RBP15.99■□□□□ 0.15
CLCNKA-202ENST00000375692 UQCRFS1P1P0C7P4 283 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms