RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 PLCD1P51178 756 aa13.32□□□□□ -0.28
MCF2L-202ENST00000375597 TMEM139Q8IV31 216 aa13.32□□□□□ -0.28
MCF2L-202ENST00000375597 CTCFLQ8NI51 663 aaPredicted RBP13.32□□□□□ -0.28
MCF2L-202ENST00000375597 DEF6Q9H4E7 631 aa13.32□□□□□ -0.28
MCF2L-202ENST00000375597 PCDH11XQ9BZA7 1347 aa13.31□□□□□ -0.28
MCF2L-202ENST00000375597 PCDH11YQ9BZA8 1340 aa13.31□□□□□ -0.28
MCF2L-202ENST00000375597 LTN1O94822 1766 aa13.31□□□□□ -0.28
MCF2L-202ENST00000375597 B4DLN1 442 aa13.31□□□□□ -0.28
MCF2L-202ENST00000375597 MYO1BO43795 1136 aa13.31□□□□□ -0.28
MCF2L-202ENST00000375597 TRMT1LQ7Z2T5 733 aaKnown RBP13.31□□□□□ -0.28
MCF2L-202ENST00000375597 FAM207AQ9NSI2 230 aaPredicted RBP13.31□□□□□ -0.28
MCF2L-202ENST00000375597 MTIF2P46199 727 aaKnown RBP13.31□□□□□ -0.28
MCF2L-202ENST00000375597 C2orf54Q08AI8 447 aa13.31□□□□□ -0.28
MCF2L-202ENST00000375597 CCDC96Q2M329 555 aa13.31□□□□□ -0.28
MCF2L-202ENST00000375597 IQCA1Q86XH1 822 aa13.31□□□□□ -0.28
MCF2L-202ENST00000375597 ESR2Q92731 530 aa13.31□□□□□ -0.28
MCF2L-202ENST00000375597 KRT23Q9C075 422 aa13.31□□□□□ -0.28
MCF2L-202ENST00000375597 TBC1D7Q9P0N9 293 aa13.31□□□□□ -0.28
MCF2L-202ENST00000375597 UTRNP46939 3433 aa13.31□□□□□ -0.28
MCF2L-202ENST00000375597 GYPCP04921 128 aa13.3□□□□□ -0.28
MCF2L-202ENST00000375597 PCCAP05165 728 aaPredicted RBP13.3□□□□□ -0.28
MCF2L-202ENST00000375597 MAP3K9P80192 1104 aa13.3□□□□□ -0.28
MCF2L-202ENST00000375597 MORC3Q14149 939 aa13.3□□□□□ -0.28
MCF2L-202ENST00000375597 FAM182BQ5T319 152 aa13.3□□□□□ -0.28
MCF2L-202ENST00000375597 DYMQ7RTS9 669 aa13.3□□□□□ -0.28
MCF2L-202ENST00000375597 DYNLL2Q96FJ2 89 aa13.3□□□□□ -0.28
MCF2L-202ENST00000375597 NAPGQ99747 312 aaPredicted RBP13.3□□□□□ -0.28
MCF2L-202ENST00000375597 EHD4Q9H223 541 aa13.3□□□□□ -0.28
MCF2L-202ENST00000375597 FAM204AQ9H8W3 233 aa13.3□□□□□ -0.28
MCF2L-202ENST00000375597 TMEM94Q12767 1356 aa13.3□□□□□ -0.28
MCF2L-202ENST00000375597 MARCH6O60337 910 aa13.3□□□□□ -0.28
MCF2L-202ENST00000375597 ERLIN1O75477 346 aa13.3□□□□□ -0.28
MCF2L-202ENST00000375597 INF2Q27J81 1249 aa13.3□□□□□ -0.28
MCF2L-202ENST00000375597 SUSD4Q5VX71 490 aa13.3□□□□□ -0.28
MCF2L-202ENST00000375597 KCTD16Q68DU8 428 aa13.3□□□□□ -0.28
MCF2L-202ENST00000375597 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.3□□□□□ -0.28
MCF2L-202ENST00000375597 SRGAP1Q7Z6B7 1085 aa13.3□□□□□ -0.28
MCF2L-202ENST00000375597 FUT8Q9BYC5 575 aa13.3□□□□□ -0.28
MCF2L-202ENST00000375597 MAGEC2Q9UBF1 373 aaPredicted RBP13.3□□□□□ -0.28
MCF2L-202ENST00000375597 CEP131Q9UPN4 1083 aa13.3□□□□□ -0.28
MCF2L-202ENST00000375597 KCNJ18B7U540 433 aa13.3□□□□□ -0.28
MCF2L-202ENST00000375597 ACTN4O43707 911 aaKnown RBP13.3□□□□□ -0.28
MCF2L-202ENST00000375597 ERVK-24P63145 666 aa13.3□□□□□ -0.28
MCF2L-202ENST00000375597 KCNJ12Q14500 433 aa13.3□□□□□ -0.28
MCF2L-202ENST00000375597 CTR9Q6PD62 1173 aa13.3□□□□□ -0.28
MCF2L-202ENST00000375597 DNAAF5Q86Y56 855 aa13.3□□□□□ -0.28
MCF2L-202ENST00000375597 SLC44A5Q8NCS7 719 aa13.3□□□□□ -0.28
MCF2L-202ENST00000375597 NCAPD2Q15021 1401 aa13.3□□□□□ -0.28
MCF2L-202ENST00000375597 CIAO1O76071 339 aa13.29□□□□□ -0.28
MCF2L-202ENST00000375597 IFNAR1P17181 557 aa13.29□□□□□ -0.28
MCF2L-202ENST00000375597 KLRK1P26718 216 aa13.29□□□□□ -0.28
MCF2L-202ENST00000375597 UBA7P41226 1012 aa13.29□□□□□ -0.28
MCF2L-202ENST00000375597 TXLNBQ8N3L3 684 aa13.29□□□□□ -0.28
MCF2L-202ENST00000375597 ENAHQ8N8S7 591 aaPredicted RBP13.29□□□□□ -0.28
MCF2L-202ENST00000375597 LPIN2Q92539 896 aa13.29□□□□□ -0.28
MCF2L-202ENST00000375597 GJA10Q969M2 543 aa13.29□□□□□ -0.28
MCF2L-202ENST00000375597 MCM9Q9NXL9 1143 aa13.29□□□□□ -0.28
MCF2L-202ENST00000375597 ADGRL3Q9HAR2 1447 aa13.29□□□□□ -0.28
MCF2L-202ENST00000375597 CCDC196A0A1B0GTZ2 297 aa13.29□□□□□ -0.28
MCF2L-202ENST00000375597 ZRANB2O95218 330 aaKnown RBP eCLIP13.29□□□□□ -0.28
MCF2L-202ENST00000375597 ATP6V1AP38606 617 aa13.29□□□□□ -0.28
MCF2L-202ENST00000375597 LETM2Q2VYF4 491 aa13.29□□□□□ -0.28
MCF2L-202ENST00000375597 GIGYF2Q6Y7W6 1299 aaKnown RBP13.29□□□□□ -0.28
MCF2L-202ENST00000375597 KIFC2Q96AC6 838 aa13.29□□□□□ -0.28
MCF2L-202ENST00000375597 CRACR2AQ9BSW2 395 aa13.29□□□□□ -0.28
MCF2L-202ENST00000375597 ISCA1Q9BUE6 129 aa13.29□□□□□ -0.28
MCF2L-202ENST00000375597 MMRN2Q9H8L6 949 aa13.29□□□□□ -0.28
MCF2L-202ENST00000375597 CDC23Q9UJX2 597 aa13.29□□□□□ -0.28
MCF2L-202ENST00000375597 ZEB2O60315 1214 aa13.29□□□□□ -0.28
MCF2L-202ENST00000375597 MFAP3LO75121 409 aa13.29□□□□□ -0.28
MCF2L-202ENST00000375597 ATP2C2O75185 946 aa13.29□□□□□ -0.28
MCF2L-202ENST00000375597 ATP1A1P05023 1023 aaKnown RBP13.29□□□□□ -0.28
MCF2L-202ENST00000375597 SPATA1Q5VX52 437 aa13.29□□□□□ -0.28
MCF2L-202ENST00000375597 TMC4Q7Z404 712 aa13.29□□□□□ -0.28
MCF2L-202ENST00000375597 ENOX1Q8TC92 643 aaKnown RBP13.29□□□□□ -0.28
MCF2L-202ENST00000375597 SMARCC1Q92922 1105 aaPredicted RBP13.29□□□□□ -0.28
MCF2L-202ENST00000375597 BPIFA3Q9BQP9 254 aa13.29□□□□□ -0.28
MCF2L-202ENST00000375597 GPR108Q9NPR9 543 aa13.29□□□□□ -0.28
MCF2L-202ENST00000375597 CPDO75976 1380 aa13.28□□□□□ -0.28
MCF2L-202ENST00000375597 JCADQ9P266 1359 aa13.28□□□□□ -0.28
MCF2L-202ENST00000375597 CCDC194A0A1B0GVG4 234 aa13.28□□□□□ -0.28
MCF2L-202ENST00000375597 BUB1O43683 1085 aa13.28□□□□□ -0.28
MCF2L-202ENST00000375597 ATP1A2P50993 1020 aa13.28□□□□□ -0.28
MCF2L-202ENST00000375597 CHRNDQ07001 517 aa13.28□□□□□ -0.28
MCF2L-202ENST00000375597 PAK1Q13153 545 aa13.28□□□□□ -0.28
MCF2L-202ENST00000375597 CASP8Q14790 479 aa13.28□□□□□ -0.28
MCF2L-202ENST00000375597 TYW1BQ6NUM6 668 aa13.28□□□□□ -0.28
MCF2L-202ENST00000375597 ATG3Q9NT62 314 aa13.28□□□□□ -0.28
MCF2L-202ENST00000375597 AGPAT5Q9NUQ2 364 aa13.28□□□□□ -0.28
MCF2L-202ENST00000375597 MYO1CO00159 1063 aa13.28□□□□□ -0.28
MCF2L-202ENST00000375597 COPB1P53618 953 aaKnown RBP13.28□□□□□ -0.28
MCF2L-202ENST00000375597 PMS1P54277 932 aaKnown RBP13.28□□□□□ -0.28
MCF2L-202ENST00000375597 ASIC1P78348 528 aa13.28□□□□□ -0.28
MCF2L-202ENST00000375597 E2F4Q16254 413 aa13.28□□□□□ -0.28
MCF2L-202ENST00000375597 TDRD12Q587J7 1177 aaKnown RBP13.28□□□□□ -0.28
MCF2L-202ENST00000375597 NOC3LQ8WTT2 800 aaKnown RBP13.28□□□□□ -0.28
MCF2L-202ENST00000375597 RABGGTAQ92696 567 aa13.28□□□□□ -0.28
MCF2L-202ENST00000375597 ANKZF1Q9H8Y5 726 aa13.28□□□□□ -0.28
MCF2L-202ENST00000375597 SAMM50Q9Y512 469 aa13.28□□□□□ -0.28
MCF2L-202ENST00000375597 LMO7Q8WWI1 1683 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms