RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 DNAJC18Q9H819 358 aa18.12■□□□□ 0.49
HDAC8-209ENST00000373589 ENTPD3O75355 529 aa18.11■□□□□ 0.49
HDAC8-209ENST00000373589 TCP10Q12799 353 aa18.11■□□□□ 0.49
HDAC8-209ENST00000373589 NR5A1Q13285 461 aa18.11■□□□□ 0.49
HDAC8-209ENST00000373589 SF3A1Q15459 793 aaKnown RBP18.11■□□□□ 0.49
HDAC8-209ENST00000373589 NPY5RQ15761 445 aa18.11■□□□□ 0.49
HDAC8-209ENST00000373589 NIM1KQ8IY84 436 aa18.11■□□□□ 0.49
HDAC8-209ENST00000373589 LZTS2Q9BRK4 669 aa18.11■□□□□ 0.49
HDAC8-209ENST00000373589 FUCA2Q9BTY2 467 aa18.11■□□□□ 0.49
HDAC8-209ENST00000373589 NUP62CLQ9H1M0 184 aa18.11■□□□□ 0.49
HDAC8-209ENST00000373589 TSPY26PQ9H489 355 aa18.11■□□□□ 0.49
HDAC8-209ENST00000373589 GOLPH3LQ9H4A5 285 aa18.11■□□□□ 0.49
HDAC8-209ENST00000373589 CLSTN2Q9H4D0 955 aa18.11■□□□□ 0.49
HDAC8-209ENST00000373589 TDRD3Q9H7E2 651 aaKnown RBP18.11■□□□□ 0.49
HDAC8-209ENST00000373589 PI4KBQ9UBF8 816 aa18.11■□□□□ 0.49
HDAC8-209ENST00000373589 CD2APQ9Y5K6 639 aa18.11■□□□□ 0.49
HDAC8-209ENST00000373589 SIPA1L1O43166 1804 aa18.1■□□□□ 0.49
HDAC8-209ENST00000373589 TOB1P50616 345 aaPredicted RBP18.1■□□□□ 0.49
HDAC8-209ENST00000373589 METTL16Q86W50 562 aaKnown RBP18.1■□□□□ 0.49
HDAC8-209ENST00000373589 ENGASEQ8NFI3 743 aa18.1■□□□□ 0.49
HDAC8-209ENST00000373589 UPF1Q92900 1129 aaKnown RBP eCLIP18.1■□□□□ 0.49
HDAC8-209ENST00000373589 ATRNL1Q5VV63 1379 aa18.1■□□□□ 0.49
HDAC8-209ENST00000373589 COL2A1P02458 1487 aaPredicted RBP18.1■□□□□ 0.49
HDAC8-209ENST00000373589 SPDYE2BA6NHP3 402 aa18.09■□□□□ 0.49
HDAC8-209ENST00000373589 CYTH3O43739 400 aa18.09■□□□□ 0.49
HDAC8-209ENST00000373589 SPDYE6P0CI01 402 aa18.09■□□□□ 0.49
HDAC8-209ENST00000373589 SNW1Q13573 536 aaKnown RBP18.09■□□□□ 0.49
HDAC8-209ENST00000373589 RILPL1Q5EBL4 403 aa18.09■□□□□ 0.49
HDAC8-209ENST00000373589 AXDND1Q5T1B0 1012 aaPredicted RBP18.09■□□□□ 0.49
HDAC8-209ENST00000373589 RBM43Q6ZSC3 357 aaKnown RBP18.09■□□□□ 0.49
HDAC8-209ENST00000373589 CCDC17Q96LX7 622 aa18.09■□□□□ 0.49
HDAC8-209ENST00000373589 TAOK3Q9H2K8 898 aa18.09■□□□□ 0.49
HDAC8-209ENST00000373589 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.09■□□□□ 0.49
HDAC8-209ENST00000373589 GREB1LQ9C091 1923 aaPredicted RBP18.09■□□□□ 0.49
HDAC8-209ENST00000373589 PPP6R2O75170 966 aa18.09■□□□□ 0.49
HDAC8-209ENST00000373589 VEGFAP15692 232 aaPredicted RBP18.09■□□□□ 0.49
HDAC8-209ENST00000373589 KRT2P35908 639 aa18.09■□□□□ 0.49
HDAC8-209ENST00000373589 FOXP4Q8IVH2 680 aaPredicted RBP18.09■□□□□ 0.49
HDAC8-209ENST00000373589 AGBL3Q8NEM8 1001 aa18.09■□□□□ 0.49
HDAC8-209ENST00000373589 SPZ1Q9BXG8 430 aa18.09■□□□□ 0.49
HDAC8-209ENST00000373589 HDAC9Q9UKV0 1011 aa18.09■□□□□ 0.49
HDAC8-209ENST00000373589 FER1L6Q2WGJ9 1857 aa18.08■□□□□ 0.49
HDAC8-209ENST00000373589 KLRF2D3W0D1 207 aa18.08■□□□□ 0.48
HDAC8-209ENST00000373589 TTLL1O95922 423 aa18.08■□□□□ 0.48
HDAC8-209ENST00000373589 PARP1P09874 1014 aaKnown RBP18.08■□□□□ 0.48
HDAC8-209ENST00000373589 SLURP2P0DP57 97 aa18.08■□□□□ 0.48
HDAC8-209ENST00000373589 SMARCA1P28370 1054 aa18.08■□□□□ 0.48
HDAC8-209ENST00000373589 PTGER2P43116 358 aa18.08■□□□□ 0.48
HDAC8-209ENST00000373589 FAM160A1Q05DH4 1040 aa18.08■□□□□ 0.48
HDAC8-209ENST00000373589 MAP3K11Q16584 847 aa18.08■□□□□ 0.48
HDAC8-209ENST00000373589 RASGRP2Q7LDG7 609 aa18.08■□□□□ 0.48
HDAC8-209ENST00000373589 FSIP1Q8NA03 581 aa18.08■□□□□ 0.48
HDAC8-209ENST00000373589 MRPS27Q92552 414 aaKnown RBP18.08■□□□□ 0.48
HDAC8-209ENST00000373589 TNFRSF25Q93038 417 aa18.08■□□□□ 0.48
HDAC8-209ENST00000373589 SH3GLB2Q9NR46 395 aa18.08■□□□□ 0.48
HDAC8-209ENST00000373589 ZBTB12Q9Y330 459 aaPredicted RBP18.08■□□□□ 0.48
HDAC8-209ENST00000373589 MYH8P13535 1937 aa18.07■□□□□ 0.48
HDAC8-209ENST00000373589 NFKBIEO00221 500 aa18.07■□□□□ 0.48
HDAC8-209ENST00000373589 GOLGA8HP0CJ92 632 aa18.07■□□□□ 0.48
HDAC8-209ENST00000373589 SNHG28P0DPA3 235 aa18.07■□□□□ 0.48
HDAC8-209ENST00000373589 CXCL9Q07325 125 aa18.07■□□□□ 0.48
HDAC8-209ENST00000373589 TATDN1Q6P1N9 297 aa18.07■□□□□ 0.48
HDAC8-209ENST00000373589 USP17L2Q6R6M4 530 aa18.07■□□□□ 0.48
HDAC8-209ENST00000373589 CCDC73Q6ZRK6 1079 aa18.07■□□□□ 0.48
HDAC8-209ENST00000373589 OGFOD1Q8N543 542 aa18.07■□□□□ 0.48
HDAC8-209ENST00000373589 TNMDQ9H2S6 317 aa18.07■□□□□ 0.48
HDAC8-209ENST00000373589 PPP1R1BQ9UD71 204 aaPredicted RBP18.07■□□□□ 0.48
HDAC8-209ENST00000373589 MTMR7Q9Y216 660 aa18.07■□□□□ 0.48
HDAC8-209ENST00000373589 BAZ2BQ9UIF8 2168 aaKnown RBP18.07■□□□□ 0.48
HDAC8-209ENST00000373589 PDHBP11177 359 aa18.06■□□□□ 0.48
HDAC8-209ENST00000373589 DLGAP5Q15398 846 aa18.06■□□□□ 0.48
HDAC8-209ENST00000373589 CAMK4Q16566 473 aa18.06■□□□□ 0.48
HDAC8-209ENST00000373589 ZSCAN29Q8IWY8 852 aaPredicted RBP18.06■□□□□ 0.48
HDAC8-209ENST00000373589 JMYQ8N9B5 988 aa18.06■□□□□ 0.48
HDAC8-209ENST00000373589 MTMR14Q8NCE2 650 aa18.06■□□□□ 0.48
HDAC8-209ENST00000373589 PIBF1Q8WXW3 757 aa18.06■□□□□ 0.48
HDAC8-209ENST00000373589 BRMS1Q9HCU9 246 aa18.06■□□□□ 0.48
HDAC8-209ENST00000373589 CABP5Q9NP86 173 aa18.06■□□□□ 0.48
HDAC8-209ENST00000373589 USP17L5A8MUK1 530 aa18.06■□□□□ 0.48
HDAC8-209ENST00000373589 CMA1P23946 247 aa18.06■□□□□ 0.48
HDAC8-209ENST00000373589 MARCKSP29966 332 aaPredicted RBP18.06■□□□□ 0.48
HDAC8-209ENST00000373589 EARS2Q5JPH6 523 aaKnown RBP18.06■□□□□ 0.48
HDAC8-209ENST00000373589 PPP4R3BQ5MIZ7 849 aa18.06■□□□□ 0.48
HDAC8-209ENST00000373589 CLEC10AQ8IUN9 316 aa18.06■□□□□ 0.48
HDAC8-209ENST00000373589 FMR1NBQ8N0W7 255 aaPredicted RBP18.06■□□□□ 0.48
HDAC8-209ENST00000373589 FAM177A1Q8N128 213 aaPredicted RBP18.06■□□□□ 0.48
HDAC8-209ENST00000373589 CLIP2Q9UDT6 1046 aa18.06■□□□□ 0.48
HDAC8-209ENST00000373589 NLRP5P59047 1200 aa18.05■□□□□ 0.48
HDAC8-209ENST00000373589 CERKLQ49MI3 558 aaPredicted RBP18.05■□□□□ 0.48
HDAC8-209ENST00000373589 LRRC47Q8N1G4 583 aaKnown RBP18.05■□□□□ 0.48
HDAC8-209ENST00000373589 ZNF70Q9UC06 446 aaPredicted RBP18.05■□□□□ 0.48
HDAC8-209ENST00000373589 MORC2Q9Y6X9 1032 aaPredicted RBP18.05■□□□□ 0.48
HDAC8-209ENST00000373589 LTBP3Q9NS15 1303 aa18.04■□□□□ 0.48
HDAC8-209ENST00000373589 FAM196BA6NMK8 535 aa18.04■□□□□ 0.48
HDAC8-209ENST00000373589 CALML3P27482 149 aa18.04■□□□□ 0.48
HDAC8-209ENST00000373589 NDUFA8P51970 172 aa18.04■□□□□ 0.48
HDAC8-209ENST00000373589 EIF6P56537 245 aaKnown RBP18.04■□□□□ 0.48
HDAC8-209ENST00000373589 SPDYE2Q495Y8 402 aa18.04■□□□□ 0.48
HDAC8-209ENST00000373589 ASPRV1Q53RT3 343 aa18.04■□□□□ 0.48
HDAC8-209ENST00000373589 JDP2Q8WYK2 163 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms