RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 BRMS1Q9HCU9 246 aa22.51■■□□□ 1.19
HDAC1-201ENST00000373548 USP40Q9NVE5 1235 aa22.51■■□□□ 1.19
HDAC1-201ENST00000373548 KIAA1468Q9P260 1216 aa22.51■■□□□ 1.19
HDAC1-201ENST00000373548 ATP2B1P20020 1258 aa22.51■■□□□ 1.19
HDAC1-201ENST00000373548 PTPREP23469 700 aa22.51■■□□□ 1.19
HDAC1-201ENST00000373548 GNAQP50148 359 aa22.51■■□□□ 1.19
HDAC1-201ENST00000373548 SLC35G1Q2M3R5 365 aa22.51■■□□□ 1.19
HDAC1-201ENST00000373548 TEKT1Q969V4 418 aa22.51■■□□□ 1.19
HDAC1-201ENST00000373548 ANO10Q9NW15 660 aa22.51■■□□□ 1.19
HDAC1-201ENST00000373548 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.51■■□□□ 1.19
HDAC1-201ENST00000373548 PTMAP06454 111 aaKnown RBP22.5■■□□□ 1.19
HDAC1-201ENST00000373548 GABPAQ06546 454 aa22.5■■□□□ 1.19
HDAC1-201ENST00000373548 IQCB1Q15051 598 aa22.5■■□□□ 1.19
HDAC1-201ENST00000373548 C7orf43Q8WVR3 580 aa22.5■■□□□ 1.19
HDAC1-201ENST00000373548 GRIN1Q05586 938 aa22.49■■□□□ 1.19
HDAC1-201ENST00000373548 NOM1Q5C9Z4 860 aaKnown RBP22.49■■□□□ 1.19
HDAC1-201ENST00000373548 APOBEC3HQ6NTF7 200 aaKnown RBP22.49■■□□□ 1.19
HDAC1-201ENST00000373548 CDC42EP5Q6NZY7 148 aa22.49■■□□□ 1.19
HDAC1-201ENST00000373548 CEP131Q9UPN4 1083 aa22.49■■□□□ 1.19
HDAC1-201ENST00000373548 PALM3A6NDB9 673 aaPredicted RBP22.49■■□□□ 1.19
HDAC1-201ENST00000373548 CEP95Q96GE4 821 aa22.49■■□□□ 1.19
HDAC1-201ENST00000373548 MTMR7Q9Y216 660 aa22.49■■□□□ 1.19
HDAC1-201ENST00000373548 TRIM75PA6NK02 468 aa22.48■■□□□ 1.19
HDAC1-201ENST00000373548 ECE2O60344 883 aa22.48■■□□□ 1.19
HDAC1-201ENST00000373548 NOVP48745 357 aa22.48■■□□□ 1.19
HDAC1-201ENST00000373548 NLRP5P59047 1200 aa22.48■■□□□ 1.19
HDAC1-201ENST00000373548 PLIN4Q96Q06 1357 aa22.48■■□□□ 1.19
HDAC1-201ENST00000373548 CYTH3O43739 400 aa22.48■■□□□ 1.19
HDAC1-201ENST00000373548 CRKP46108 304 aa22.48■■□□□ 1.19
HDAC1-201ENST00000373548 STRIP1Q5VSL9 837 aa22.48■■□□□ 1.19
HDAC1-201ENST00000373548 KCNH3Q9ULD8 1083 aa22.48■■□□□ 1.19
HDAC1-201ENST00000373548 ZKSCAN5Q9Y2L8 839 aa22.48■■□□□ 1.19
HDAC1-201ENST00000373548 SRPRBQ9Y5M8 271 aaKnown RBP22.48■■□□□ 1.19
HDAC1-201ENST00000373548 MORC2Q9Y6X9 1032 aaPredicted RBP22.48■■□□□ 1.19
HDAC1-201ENST00000373548 WNT7AO00755 349 aa22.47■■□□□ 1.19
HDAC1-201ENST00000373548 ADAMTS3O15072 1205 aa22.47■■□□□ 1.19
HDAC1-201ENST00000373548 SPECC1Q5M775 1068 aa22.47■■□□□ 1.19
HDAC1-201ENST00000373548 DACT2Q5SW24 774 aa22.47■■□□□ 1.19
HDAC1-201ENST00000373548 RASGRP2Q7LDG7 609 aa22.47■■□□□ 1.19
HDAC1-201ENST00000373548 PDGFDQ9GZP0 370 aaPredicted RBP22.47■■□□□ 1.19
HDAC1-201ENST00000373548 TOP1P11387 765 aaKnown RBP22.46■■□□□ 1.19
HDAC1-201ENST00000373548 MSNP26038 577 aaKnown RBP22.46■■□□□ 1.19
HDAC1-201ENST00000373548 FKBP1AP62942 108 aaKnown RBP22.46■■□□□ 1.19
HDAC1-201ENST00000373548 ZNF579Q8NAF0 562 aaKnown RBP22.46■■□□□ 1.19
HDAC1-201ENST00000373548 GPKOWQ92917 476 aaPredicted RBP eCLIP22.46■■□□□ 1.192e-7■□□□□ 11.3
HDAC1-201ENST00000373548 OSBPL5Q9H0X9 879 aaPredicted RBP22.46■■□□□ 1.19
HDAC1-201ENST00000373548 SH3GLB2Q9NR46 395 aa22.46■■□□□ 1.19
HDAC1-201ENST00000373548 KIAA0825Q8IV33 1275 aa22.46■■□□□ 1.19
HDAC1-201ENST00000373548 ZDHHC15Q96MV8 337 aa22.46■■□□□ 1.19
HDAC1-201ENST00000373548 GOLGA8HP0CJ92 632 aa22.45■■□□□ 1.18
HDAC1-201ENST00000373548 CEP57L1Q8IYX8 460 aa22.45■■□□□ 1.18
HDAC1-201ENST00000373548 LZTS2Q9BRK4 669 aa22.45■■□□□ 1.18
HDAC1-201ENST00000373548 NFIAQ12857 509 aa22.45■■□□□ 1.18
HDAC1-201ENST00000373548 AOC3Q16853 763 aa22.45■■□□□ 1.18
HDAC1-201ENST00000373548 LONRF3Q496Y0 759 aa22.45■■□□□ 1.18
HDAC1-201ENST00000373548 MRIQ9BWK5 157 aa22.45■■□□□ 1.18
HDAC1-201ENST00000373548 SERPINB13Q9UIV8 391 aa22.45■■□□□ 1.18
HDAC1-201ENST00000373548 KLRF2D3W0D1 207 aa22.44■■□□□ 1.18
HDAC1-201ENST00000373548 AKR1B1P15121 316 aa22.44■■□□□ 1.18
HDAC1-201ENST00000373548 CALML3P27482 149 aa22.44■■□□□ 1.18
HDAC1-201ENST00000373548 DPCR1Q3MIW9 517 aa22.44■■□□□ 1.18
HDAC1-201ENST00000373548 TYW1BQ6NUM6 668 aa22.44■■□□□ 1.18
HDAC1-201ENST00000373548 KRBA2Q6ZNG9 492 aa22.44■■□□□ 1.18
HDAC1-201ENST00000373548 DHX40Q8IX18 779 aaKnown RBP22.44■■□□□ 1.18
HDAC1-201ENST00000373548 FAM13BQ9NYF5 915 aa22.44■■□□□ 1.18
HDAC1-201ENST00000373548 PCDHAC2Q9Y5I4 1007 aa22.44■■□□□ 1.18
HDAC1-201ENST00000373548 TTC38Q5R3I4 469 aa22.43■■□□□ 1.18
HDAC1-201ENST00000373548 PIK3AP1Q6ZUJ8 805 aa22.43■■□□□ 1.18
HDAC1-201ENST00000373548 SPZ1Q9BXG8 430 aa22.43■■□□□ 1.18
HDAC1-201ENST00000373548 GOLGA6L19H0YKK7 550 aa22.43■■□□□ 1.18
HDAC1-201ENST00000373548 BIN1O00499 593 aa22.43■■□□□ 1.18
HDAC1-201ENST00000373548 BMP15O95972 392 aa22.43■■□□□ 1.18
HDAC1-201ENST00000373548 PARP1P09874 1014 aaKnown RBP22.43■■□□□ 1.18
HDAC1-201ENST00000373548 KIAA2012Q0VF49 1180 aa22.43■■□□□ 1.18
HDAC1-201ENST00000373548 WWC2Q6AWC2 1192 aa22.43■■□□□ 1.18
HDAC1-201ENST00000373548 CC2D2BQ6DHV5 1058 aa22.43■■□□□ 1.18
HDAC1-201ENST00000373548 USP17L2Q6R6M4 530 aa22.43■■□□□ 1.18
HDAC1-201ENST00000373548 METTL16Q86W50 562 aaKnown RBP22.43■■□□□ 1.18
HDAC1-201ENST00000373548 BLIDQ8IZY5 108 aa22.43■■□□□ 1.18
HDAC1-201ENST00000373548 CSRNP2Q9H175 543 aa22.43■■□□□ 1.18
HDAC1-201ENST00000373548 MTMR4Q9NYA4 1195 aa22.43■■□□□ 1.18
HDAC1-201ENST00000373548 SWAP70Q9UH65 585 aa22.43■■□□□ 1.18
HDAC1-201ENST00000373548 TUBE1Q9UJT0 475 aa22.43■■□□□ 1.18
HDAC1-201ENST00000373548 C10orf71Q711Q0 1435 aa22.42■■□□□ 1.18
HDAC1-201ENST00000373548 IGKV6D-41A0A0C4DH26 115 aa22.42■■□□□ 1.18
HDAC1-201ENST00000373548 NLRP12P59046 1061 aa22.42■■□□□ 1.18
HDAC1-201ENST00000373548 HDLBPQ00341 1268 aaKnown RBP22.42■■□□□ 1.18
HDAC1-201ENST00000373548 ZRSR1Q15695 479 aaKnown RBP22.42■■□□□ 1.18
HDAC1-201ENST00000373548 ZNF174Q15697 407 aa22.42■■□□□ 1.18
HDAC1-201ENST00000373548 NAT10Q9H0A0 1025 aaKnown RBP22.42■■□□□ 1.18
HDAC1-201ENST00000373548 CPVLQ9H3G5 476 aa22.42■■□□□ 1.18
HDAC1-201ENST00000373548 PCDHA4Q9UN74 947 aa22.42■■□□□ 1.18
HDAC1-201ENST00000373548 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.42■■□□□ 1.186e-8■■□□□ 14.1
HDAC1-201ENST00000373548 MYO3BQ8WXR4 1341 aa22.42■■□□□ 1.18
HDAC1-201ENST00000373548 SIPA1L1O43166 1804 aa22.42■■□□□ 1.18
HDAC1-201ENST00000373548 GREB1LQ9C091 1923 aaPredicted RBP22.42■■□□□ 1.18
HDAC1-201ENST00000373548 SHMT1P34896 483 aa22.42■■□□□ 1.18
HDAC1-201ENST00000373548 PNOCQ13519 176 aa22.42■■□□□ 1.18
HDAC1-201ENST00000373548 PLA2G4DQ86XP0 818 aa22.42■■□□□ 1.18
HDAC1-201ENST00000373548 CNNM3Q8NE01 707 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms