RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 PDE4BQ07343 736 aa25.28■■□□□ 1.64
TMEM54-202ENST00000373463 FAM47AQ5JRC9 791 aa25.28■■□□□ 1.64
TMEM54-202ENST00000373463 ZNF444Q8N0Y2 327 aaPredicted RBP25.28■■□□□ 1.64
TMEM54-202ENST00000373463 SPICE1Q8N0Z3 855 aa25.28■■□□□ 1.64
TMEM54-202ENST00000373463 NKX2-3Q8TAU0 364 aa25.28■■□□□ 1.64
TMEM54-202ENST00000373463 CEP95Q96GE4 821 aa25.28■■□□□ 1.64
TMEM54-202ENST00000373463 SRRDQ9UH36 339 aa25.28■■□□□ 1.64
TMEM54-202ENST00000373463 CNMDO75829 334 aa25.27■■□□□ 1.64
TMEM54-202ENST00000373463 FMNL1O95466 1100 aaPredicted RBP25.27■■□□□ 1.64
TMEM54-202ENST00000373463 GNRH1P01148 92 aa25.27■■□□□ 1.64
TMEM54-202ENST00000373463 CHMLP26374 656 aa25.27■■□□□ 1.64
TMEM54-202ENST00000373463 ATP2B2Q01814 1243 aa25.27■■□□□ 1.64
TMEM54-202ENST00000373463 ARHGEF6Q15052 776 aa25.27■■□□□ 1.64
TMEM54-202ENST00000373463 NEDD1Q8NHV4 660 aa25.27■■□□□ 1.64
TMEM54-202ENST00000373463 ZNF287Q9HBT7 754 aa25.27■■□□□ 1.64
TMEM54-202ENST00000373463 NYAP2Q9P242 653 aa25.27■■□□□ 1.64
TMEM54-202ENST00000373463 GABRQQ9UN88 632 aa25.27■■□□□ 1.64
TMEM54-202ENST00000373463 PLXNB2O15031 1838 aa25.27■■□□□ 1.64
TMEM54-202ENST00000373463 FCGRTP55899 365 aa25.26■■□□□ 1.63
TMEM54-202ENST00000373463 Q3C1V9 767 aa25.26■■□□□ 1.63
TMEM54-202ENST00000373463 LPAR1Q92633 364 aa25.26■■□□□ 1.63
TMEM54-202ENST00000373463 SPDYE16A6NNV3 312 aaPredicted RBP25.25■■□□□ 1.63
TMEM54-202ENST00000373463 SLC3A2P08195 630 aaKnown RBP25.25■■□□□ 1.63
TMEM54-202ENST00000373463 MFAP1P55081 439 aaKnown RBP25.25■■□□□ 1.63
TMEM54-202ENST00000373463 HAND2P61296 217 aa25.25■■□□□ 1.63
TMEM54-202ENST00000373463 TFAP4Q01664 338 aa25.25■■□□□ 1.63
TMEM54-202ENST00000373463 PRKCZQ05513 592 aa25.25■■□□□ 1.63
TMEM54-202ENST00000373463 LBX2Q6XYB7 198 aa25.25■■□□□ 1.63
TMEM54-202ENST00000373463 TBC1D10CQ8IV04 446 aa25.25■■□□□ 1.63
TMEM54-202ENST00000373463 SH2D4AQ9H788 454 aa25.25■■□□□ 1.63
TMEM54-202ENST00000373463 MTMR4Q9NYA4 1195 aa25.25■■□□□ 1.63
TMEM54-202ENST00000373463 MYPNQ86TC9 1320 aa25.24■■□□□ 1.63
TMEM54-202ENST00000373463 ORC4O43929 436 aa25.24■■□□□ 1.63
TMEM54-202ENST00000373463 ARMC5Q96C12 935 aa25.24■■□□□ 1.63
TMEM54-202ENST00000373463 PAGR1Q9BTK6 254 aa25.24■■□□□ 1.63
TMEM54-202ENST00000373463 IL17RBQ9NRM6 502 aa25.24■■□□□ 1.63
TMEM54-202ENST00000373463 BTBD7Q9P203 1132 aa25.24■■□□□ 1.63
TMEM54-202ENST00000373463 ERVK-9P63128 1117 aa25.23■■□□□ 1.63
TMEM54-202ENST00000373463 ERVK-24P63145 666 aa25.23■■□□□ 1.63
TMEM54-202ENST00000373463 MKL1Q969V6 931 aa25.23■■□□□ 1.63
TMEM54-202ENST00000373463 DSCC1Q9BVC3 393 aa25.23■■□□□ 1.63
TMEM54-202ENST00000373463 CLIP2Q9UDT6 1046 aa25.23■■□□□ 1.63
TMEM54-202ENST00000373463 TNPO2O14787 897 aaKnown RBP25.22■■□□□ 1.63
TMEM54-202ENST00000373463 WDR46O15213 610 aaKnown RBP25.22■■□□□ 1.63
TMEM54-202ENST00000373463 NMT2O60551 498 aa25.22■■□□□ 1.63
TMEM54-202ENST00000373463 TSPY3P0CV98 308 aa25.22■■□□□ 1.63
TMEM54-202ENST00000373463 TSPY8P0CW00 308 aa25.22■■□□□ 1.63
TMEM54-202ENST00000373463 PRMT2P55345 433 aa25.22■■□□□ 1.63
TMEM54-202ENST00000373463 GPRC5AQ8NFJ5 357 aa25.22■■□□□ 1.63
TMEM54-202ENST00000373463 CCDC136Q96JN2 1154 aa25.22■■□□□ 1.63
TMEM54-202ENST00000373463 TANGO6Q9C0B7 1094 aa25.22■■□□□ 1.63
TMEM54-202ENST00000373463 PORCNQ9H237 461 aa25.22■■□□□ 1.63
TMEM54-202ENST00000373463 FBXO28Q9NVF7 368 aa25.22■■□□□ 1.63
TMEM54-202ENST00000373463 CENPFP49454 3210 aa25.22■■□□□ 1.63
TMEM54-202ENST00000373463 COG2Q14746 738 aa25.21■■□□□ 1.63
TMEM54-202ENST00000373463 GTF3C2Q8WUA4 911 aaPredicted RBP25.21■■□□□ 1.63
TMEM54-202ENST00000373463 NUP88Q99567 741 aaPredicted RBP25.21■■□□□ 1.63
TMEM54-202ENST00000373463 RABGAP1Q9Y3P9 1069 aa25.21■■□□□ 1.63
TMEM54-202ENST00000373463 COL11A1P12107 1806 aaPredicted RBP25.21■■□□□ 1.63
TMEM54-202ENST00000373463 RAD50Q92878 1312 aa25.2■■□□□ 1.62
TMEM54-202ENST00000373463 F5H6K3 240 aa25.2■■□□□ 1.62
TMEM54-202ENST00000373463 NDUFB10O96000 172 aa25.2■■□□□ 1.62
TMEM54-202ENST00000373463 FLT3LGP49771 235 aa25.2■■□□□ 1.62
TMEM54-202ENST00000373463 SOX10P56693 466 aa25.2■■□□□ 1.62
TMEM54-202ENST00000373463 KLRC3Q07444 240 aa25.2■■□□□ 1.62
TMEM54-202ENST00000373463 LRRC47Q8N1G4 583 aaKnown RBP25.2■■□□□ 1.62
TMEM54-202ENST00000373463 SH3TC2Q8TF17 1288 aa25.2■■□□□ 1.62
TMEM54-202ENST00000373463 STAG1Q8WVM7 1258 aa25.2■■□□□ 1.62
TMEM54-202ENST00000373463 GOPCQ9HD26 462 aa25.2■■□□□ 1.62
TMEM54-202ENST00000373463 GJD2Q9UKL4 321 aa25.2■■□□□ 1.62
TMEM54-202ENST00000373463 NEDD4P46934 1319 aa25.19■■□□□ 1.62
TMEM54-202ENST00000373463 TSPY2A6NKD2 308 aa25.19■■□□□ 1.62
TMEM54-202ENST00000373463 TTLL1O95922 423 aa25.19■■□□□ 1.62
TMEM54-202ENST00000373463 HOXD10P28358 340 aa25.19■■□□□ 1.62
TMEM54-202ENST00000373463 DSG3P32926 999 aa25.19■■□□□ 1.62
TMEM54-202ENST00000373463 NOVP48745 357 aa25.19■■□□□ 1.62
TMEM54-202ENST00000373463 FAM83BQ5T0W9 1011 aa25.19■■□□□ 1.62
TMEM54-202ENST00000373463 AKNAD1Q5T1N1 836 aa25.19■■□□□ 1.62
TMEM54-202ENST00000373463 ATG4CQ96DT6 458 aa25.19■■□□□ 1.62
TMEM54-202ENST00000373463 ZNF333Q96JL9 665 aa25.19■■□□□ 1.62
TMEM54-202ENST00000373463 SGSM2O43147 1006 aa25.18■■□□□ 1.62
TMEM54-202ENST00000373463 RANBP6O60518 1105 aaKnown RBP25.18■■□□□ 1.62
TMEM54-202ENST00000373463 FLOT1O75955 427 aa25.18■■□□□ 1.62
TMEM54-202ENST00000373463 PTH1RQ03431 593 aa25.18■■□□□ 1.62
TMEM54-202ENST00000373463 SLC9C1Q4G0N8 1177 aa25.18■■□□□ 1.62
TMEM54-202ENST00000373463 RBBP6Q7Z6E9 1792 aaKnown RBP25.18■■□□□ 1.62
TMEM54-202ENST00000373463 NEFLP07196 543 aa25.17■■□□□ 1.62
TMEM54-202ENST00000373463 RRP12Q5JTH9 1297 aaKnown RBP25.17■■□□□ 1.62
TMEM54-202ENST00000373463 HOXC10Q9NYD6 342 aa25.17■■□□□ 1.62
TMEM54-202ENST00000373463 SYNPO2Q9UMS6 1093 aa25.17■■□□□ 1.62
TMEM54-202ENST00000373463 ADAMTS5Q9UNA0 930 aa25.17■■□□□ 1.62
TMEM54-202ENST00000373463 ZNF213O14771 459 aa25.16■■□□□ 1.62
TMEM54-202ENST00000373463 RAD21O60216 631 aa25.16■■□□□ 1.62
TMEM54-202ENST00000373463 IRF5Q13568 498 aa25.16■■□□□ 1.62
TMEM54-202ENST00000373463 BMP2KLQ5H9B9 411 aa25.16■■□□□ 1.62
TMEM54-202ENST00000373463 GMCL1P1Q8NEA9 526 aa25.16■■□□□ 1.62
TMEM54-202ENST00000373463 RAET1EQ8TD07 263 aa25.16■■□□□ 1.62
TMEM54-202ENST00000373463 COA7Q96BR5 231 aa25.16■■□□□ 1.62
TMEM54-202ENST00000373463 TOMM22Q9NS69 142 aa25.16■■□□□ 1.62
TMEM54-202ENST00000373463 GRK4P32298 578 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms