RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 AMPD2Q01433 879 aa13.5□□□□□ -0.25
SNX21-205ENST00000372547 C2orf54Q08AI8 447 aa13.5□□□□□ -0.25
SNX21-205ENST00000372547 TADA2BQ86TJ2 420 aa13.5□□□□□ -0.25
SNX21-205ENST00000372547 KAT14Q9H8E8 782 aa13.5□□□□□ -0.25
SNX21-205ENST00000372547 POLD4Q9HCU8 107 aa13.5□□□□□ -0.25
SNX21-205ENST00000372547 TACC3Q9Y6A5 838 aa13.5□□□□□ -0.25
SNX21-205ENST00000372547 GOLGA6CA6NDK9 693 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 KCNJ18B7U540 433 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 SNAP23O00161 211 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 DEXIO95424 95 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 GOLGA6DP0CG33 693 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 PHKA1P46020 1223 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 KCNJ12Q14500 433 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 TSR1Q2NL82 804 aaKnown RBP13.49□□□□□ -0.25
SNX21-205ENST00000372547 WDR93Q6P2C0 686 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 SGMS1Q86VZ5 419 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 IFNL3Q8IZI9 196 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 MAGEB6Q8N7X4 407 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 CTCFLQ8NI51 663 aaPredicted RBP13.49□□□□□ -0.25
SNX21-205ENST00000372547 FAM76AQ8TAV0 307 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 CCDC51Q96ER9 411 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 GOLGA6AQ9NYA3 693 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 REXO2Q9Y3B8 237 aaKnown RBP13.49□□□□□ -0.25
SNX21-205ENST00000372547 SAMM50Q9Y512 469 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 PPARDQ03181 441 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 PAXIP1Q6ZW49 1069 aaPredicted RBP13.49□□□□□ -0.25
SNX21-205ENST00000372547 EFCAB13Q8IY85 973 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 CRACR2BQ8N4Y2 399 aaPredicted RBP13.49□□□□□ -0.25
SNX21-205ENST00000372547 SPATA20Q8TB22 786 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 COG1Q8WTW3 980 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 JAKMIP2Q96AA8 810 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 PSMB7Q99436 277 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 SELENOOQ9BVL4 669 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 EPB41L4AQ9HCS5 686 aaPredicted RBP13.49□□□□□ -0.25
SNX21-205ENST00000372547 TTC26A0AVF1 554 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 TRIM49BA6NDI0 452 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 ERLIN2O94905 339 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 PRPF6O94906 941 aaKnown RBP13.49□□□□□ -0.25
SNX21-205ENST00000372547 ELOA2Q8IYF1 753 aaPredicted RBP13.49□□□□□ -0.25
SNX21-205ENST00000372547 ZNF579Q8NAF0 562 aaKnown RBP13.49□□□□□ -0.25
SNX21-205ENST00000372547 NELFBQ8WX92 580 aa13.49□□□□□ -0.25
SNX21-205ENST00000372547 PCMTD1Q96MG8 357 aaPredicted RBP13.49□□□□□ -0.25
SNX21-205ENST00000372547 CDHR2Q9BYE9 1310 aa13.48□□□□□ -0.25
SNX21-205ENST00000372547 SIPA1L3O60292 1781 aaPredicted RBP13.48□□□□□ -0.25
SNX21-205ENST00000372547 GOLGA6BA6NDN3 693 aa13.48□□□□□ -0.25
SNX21-205ENST00000372547 MINDY4BA8MYZ0 360 aa13.48□□□□□ -0.25
SNX21-205ENST00000372547 GUCY2CP25092 1073 aa13.48□□□□□ -0.25
SNX21-205ENST00000372547 TTF1Q15361 905 aaPredicted RBP13.48□□□□□ -0.25
SNX21-205ENST00000372547 FBXW10Q5XX13 1052 aa13.48□□□□□ -0.25
SNX21-205ENST00000372547 TRAPPC11Q7Z392 1133 aa13.48□□□□□ -0.25
SNX21-205ENST00000372547 MIGA1Q8NAN2 632 aa13.48□□□□□ -0.25
SNX21-205ENST00000372547 BCAS4Q8TDM0 211 aa13.48□□□□□ -0.25
SNX21-205ENST00000372547 STRBPQ96SI9 672 aaKnown RBP13.48□□□□□ -0.25
SNX21-205ENST00000372547 GDAQ9Y2T3 454 aa13.48□□□□□ -0.25
SNX21-205ENST00000372547 DUSP10Q9Y6W6 482 aa13.48□□□□□ -0.25
SNX21-205ENST00000372547 TUBBP07437 444 aa13.48□□□□□ -0.25
SNX21-205ENST00000372547 LIFRP42702 1097 aa13.48□□□□□ -0.25
SNX21-205ENST00000372547 PAK1Q13153 545 aa13.48□□□□□ -0.25
SNX21-205ENST00000372547 TCP11X2Q5H9J9 407 aa13.48□□□□□ -0.25
SNX21-205ENST00000372547 AKNAD1Q5T1N1 836 aa13.48□□□□□ -0.25
SNX21-205ENST00000372547 TICAM2Q86XR7 235 aa13.48□□□□□ -0.25
SNX21-205ENST00000372547 GSDMAQ96QA5 445 aa13.48□□□□□ -0.25
SNX21-205ENST00000372547 LUC7L2Q9Y383 392 aaKnown RBP13.48□□□□□ -0.25
SNX21-205ENST00000372547 MEGF6O75095 1541 aa13.48□□□□□ -0.25
SNX21-205ENST00000372547 STK36Q9NRP7 1315 aa13.47□□□□□ -0.25
SNX21-205ENST00000372547 EXOC5O00471 708 aa13.47□□□□□ -0.25
SNX21-205ENST00000372547 EBAG9O00559 213 aa13.47□□□□□ -0.25
SNX21-205ENST00000372547 ITGA6P23229 1130 aa13.47□□□□□ -0.25
SNX21-205ENST00000372547 MNAT1P51948 309 aa13.47□□□□□ -0.25
SNX21-205ENST00000372547 CYP27A1Q02318 531 aa13.47□□□□□ -0.25
SNX21-205ENST00000372547 PPARAQ07869 468 aa13.47□□□□□ -0.25
SNX21-205ENST00000372547 SND1Q7KZF4 910 aaKnown RBP eCLIP13.47□□□□□ -0.25
SNX21-205ENST00000372547 FANCBQ8NB91 859 aa13.47□□□□□ -0.25
SNX21-205ENST00000372547 RASSF8Q8NHQ8 419 aa13.47□□□□□ -0.25
SNX21-205ENST00000372547 UBAC1Q9BSL1 405 aa13.47□□□□□ -0.25
SNX21-205ENST00000372547 GREM2Q9H772 168 aa13.47□□□□□ -0.25
SNX21-205ENST00000372547 AATFQ9NY61 560 aaKnown RBP eCLIP13.47□□□□□ -0.25
SNX21-205ENST00000372547 MYO1AQ9UBC5 1043 aa13.47□□□□□ -0.25
SNX21-205ENST00000372547 IDEP14735 1019 aa13.47□□□□□ -0.25
SNX21-205ENST00000372547 HSPA2P54652 639 aa13.47□□□□□ -0.25
SNX21-205ENST00000372547 SLC7A5Q01650 507 aa13.47□□□□□ -0.25
SNX21-205ENST00000372547 TCIRG1Q13488 830 aa13.47□□□□□ -0.25
SNX21-205ENST00000372547 ZNF654Q8IZM8 581 aa13.47□□□□□ -0.25
SNX21-205ENST00000372547 RRP36Q96EU6 259 aaKnown RBP13.47□□□□□ -0.25
SNX21-205ENST00000372547 PLIN2Q99541 437 aa13.47□□□□□ -0.25
SNX21-205ENST00000372547 FAM169AQ9Y6X4 670 aa13.47□□□□□ -0.25
SNX21-205ENST00000372547 A0A087WUV0 522 aaPredicted RBP13.46□□□□□ -0.25
SNX21-205ENST00000372547 GNGT1P63211 74 aa13.46□□□□□ -0.25
SNX21-205ENST00000372547 PTGDRQ13258 359 aa13.46□□□□□ -0.25
SNX21-205ENST00000372547 EZH2Q15910 746 aaKnown RBP13.46□□□□□ -0.25
SNX21-205ENST00000372547 MSL3Q8N5Y2 521 aaKnown RBP13.46□□□□□ -0.25
SNX21-205ENST00000372547 V9GY48 417 aaPredicted RBP13.46□□□□□ -0.25
SNX21-205ENST00000372547 RGPD5Q99666 1765 aa13.46□□□□□ -0.25
SNX21-205ENST00000372547 PATL2C9JE40 543 aaKnown RBP13.46□□□□□ -0.26
SNX21-205ENST00000372547 SMIM22K7EJ46 135 aa13.46□□□□□ -0.26
SNX21-205ENST00000372547 PDE2AO00408 941 aaPredicted RBP13.46□□□□□ -0.26
SNX21-205ENST00000372547 MCM7P33993 719 aa13.46□□□□□ -0.26
SNX21-205ENST00000372547 IRAK1P51617 712 aa13.46□□□□□ -0.26
SNX21-205ENST00000372547 EIF5P55010 431 aaKnown RBP13.46□□□□□ -0.26
SNX21-205ENST00000372547 HERVK_113P62684 666 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms